RNA–Protein interactions for RNA: ENST00000259460.12

RABEPK-201, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-201ENST00000259460 CWH43Q9H720 699 aa16.85■□□□□ 0.29
RABEPK-201ENST00000259460 ARHGEF3Q9NR81 526 aa16.85■□□□□ 0.29
RABEPK-201ENST00000259460 SPATA6Q9NWH7 488 aaPredicted RBP16.85■□□□□ 0.29
RABEPK-201ENST00000259460 TUBE1Q9UJT0 475 aa16.85■□□□□ 0.29
RABEPK-201ENST00000259460 LAMTOR5O43504 91 aa16.84■□□□□ 0.29
RABEPK-201ENST00000259460 HSPD1P10809 573 aaKnown RBP16.84■□□□□ 0.29
RABEPK-201ENST00000259460 TOP1P11387 765 aaKnown RBP16.84■□□□□ 0.29
RABEPK-201ENST00000259460 PBX3P40426 434 aa16.84■□□□□ 0.29
RABEPK-201ENST00000259460 SPEM2Q0P670 501 aa16.84■□□□□ 0.29
RABEPK-201ENST00000259460 CDC37Q16543 378 aaPredicted RBP16.84■□□□□ 0.29
RABEPK-201ENST00000259460 GPR152Q8TDT2 470 aa16.84■□□□□ 0.29
RABEPK-201ENST00000259460 ZFP91Q96JP5 570 aaPredicted RBP16.84■□□□□ 0.29
RABEPK-201ENST00000259460 TMEM47Q9BQJ4 181 aa16.84■□□□□ 0.29
RABEPK-201ENST00000259460 PDCD2LQ9BRP1 358 aa16.84■□□□□ 0.29
RABEPK-201ENST00000259460 CPVLQ9H3G5 476 aa16.84■□□□□ 0.29
RABEPK-201ENST00000259460 RWDD1Q9H446 243 aaPredicted RBP16.84■□□□□ 0.29
RABEPK-201ENST00000259460 FBXO4Q9UKT5 387 aa16.84■□□□□ 0.29
RABEPK-201ENST00000259460 ASH1LQ9NR48 2969 aaKnown RBP16.84■□□□□ 0.29
RABEPK-201ENST00000259460 FLNBO75369 2602 aaKnown RBP16.83■□□□□ 0.28
RABEPK-201ENST00000259460 PATL2C9JE40 543 aaKnown RBP16.83■□□□□ 0.28
RABEPK-201ENST00000259460 SRFP11831 508 aa16.83■□□□□ 0.28
RABEPK-201ENST00000259460 EPCAMP16422 314 aa16.83■□□□□ 0.28
RABEPK-201ENST00000259460 PDE4AP27815 886 aa16.83■□□□□ 0.28
RABEPK-201ENST00000259460 CSTF1Q05048 431 aaKnown RBP16.83■□□□□ 0.28
RABEPK-201ENST00000259460 CTDSPL2Q05D32 466 aa16.83■□□□□ 0.28
RABEPK-201ENST00000259460 HDAC1Q13547 482 aaPredicted RBP16.83■□□□□ 0.28
RABEPK-201ENST00000259460 MRPL43Q8N983 215 aaKnown RBP16.83■□□□□ 0.28
RABEPK-201ENST00000259460 IL31RAQ8NI17 732 aa16.83■□□□□ 0.28
RABEPK-201ENST00000259460 TMX1Q9H3N1 280 aa16.83■□□□□ 0.28
RABEPK-201ENST00000259460 CFBP00751 764 aa16.82■□□□□ 0.28
RABEPK-201ENST00000259460 TGFB3P10600 412 aa16.82■□□□□ 0.28
RABEPK-201ENST00000259460 PPM1AP35813 382 aa16.82■□□□□ 0.28
RABEPK-201ENST00000259460 KRT17Q04695 432 aa16.82■□□□□ 0.28
RABEPK-201ENST00000259460 PPFIA1Q13136 1202 aa16.82■□□□□ 0.28
RABEPK-201ENST00000259460 NONOQ15233 471 aaKnown RBP eCLIP16.82■□□□□ 0.28
RABEPK-201ENST00000259460 N4BP2L1Q5TBK1 243 aaPredicted RBP16.82■□□□□ 0.28
RABEPK-201ENST00000259460 FAM49AQ9H0Q0 323 aaPredicted RBP16.82■□□□□ 0.28
RABEPK-201ENST00000259460 TRPV2Q9Y5S1 764 aa16.82■□□□□ 0.28
RABEPK-201ENST00000259460 COL4A3Q01955 1670 aa16.82■□□□□ 0.28
RABEPK-201ENST00000259460 SPDYE4A6NLX3 237 aa16.81■□□□□ 0.28
RABEPK-201ENST00000259460 C1QTNF9BB2RNN3 333 aa16.81■□□□□ 0.28
RABEPK-201ENST00000259460 C1QTNF9P0C862 333 aa16.81■□□□□ 0.28
RABEPK-201ENST00000259460 SP4Q02446 784 aa16.81■□□□□ 0.28
RABEPK-201ENST00000259460 TMEM62Q0P6H9 643 aa16.81■□□□□ 0.28
RABEPK-201ENST00000259460 KCNT2Q6UVM3 1135 aa16.81■□□□□ 0.28
RABEPK-201ENST00000259460 UNQ6494/PRO21346Q6UXR6 183 aa16.81■□□□□ 0.28
RABEPK-201ENST00000259460 ZBTB44Q8NCP5 570 aa16.81■□□□□ 0.28
RABEPK-201ENST00000259460 ZNF558Q96NG5 402 aa16.81■□□□□ 0.28
RABEPK-201ENST00000259460 ZSCAN32Q9NX65 697 aa16.81■□□□□ 0.28
RABEPK-201ENST00000259460 TELO2Q9Y4R8 837 aa16.81■□□□□ 0.28
RABEPK-201ENST00000259460 SQORQ9Y6N5 450 aa16.81■□□□□ 0.28
RABEPK-201ENST00000259460 IGSF9BQ9UPX0 1349 aa16.81■□□□□ 0.28
RABEPK-201ENST00000259460 IGF2RP11717 2491 aa16.8■□□□□ 0.28
RABEPK-201ENST00000259460 M0QZ92 97 aa16.8■□□□□ 0.28
RABEPK-201ENST00000259460 TBC1D4O60343 1298 aa16.8■□□□□ 0.28
RABEPK-201ENST00000259460 LILRB5O75023 590 aa16.8■□□□□ 0.28
RABEPK-201ENST00000259460 GOLGA8HP0CJ92 632 aa16.8■□□□□ 0.28
RABEPK-201ENST00000259460 FGFR1P11362 822 aa16.8■□□□□ 0.28
RABEPK-201ENST00000259460 PGM5Q15124 567 aa16.8■□□□□ 0.28
RABEPK-201ENST00000259460 GRIK4Q16099 956 aa16.8■□□□□ 0.28
RABEPK-201ENST00000259460 TMEM266Q2M3C6 531 aa16.8■□□□□ 0.28
RABEPK-201ENST00000259460 DCLRE1AQ6PJP8 1040 aa16.8■□□□□ 0.28
RABEPK-201ENST00000259460 METTL7BQ6UX53 244 aa16.8■□□□□ 0.28
RABEPK-201ENST00000259460 CYFIP1Q7L576 1253 aa16.8■□□□□ 0.28
RABEPK-201ENST00000259460 GPR149Q86SP6 731 aa16.8■□□□□ 0.28
RABEPK-201ENST00000259460 CABP7Q86V35 215 aa16.8■□□□□ 0.28
RABEPK-201ENST00000259460 ZBTB10Q96DT7 871 aa16.8■□□□□ 0.28
RABEPK-201ENST00000259460 GPATCH3Q96I76 525 aa16.8■□□□□ 0.28
RABEPK-201ENST00000259460 SFXN1Q9H9B4 322 aa16.8■□□□□ 0.28
RABEPK-201ENST00000259460 MRPL11Q9Y3B7 192 aaKnown RBP16.8■□□□□ 0.28
RABEPK-201ENST00000259460 NBEAQ8NFP9 2946 aa16.79■□□□□ 0.28
RABEPK-201ENST00000259460 LAMA4Q16363 1823 aa16.79■□□□□ 0.28
RABEPK-201ENST00000259460 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.79■□□□□ 0.28
RABEPK-201ENST00000259460 RNF113AO15541 343 aaKnown RBP16.79■□□□□ 0.28
RABEPK-201ENST00000259460 MGEA5O60502 916 aa16.79■□□□□ 0.28
RABEPK-201ENST00000259460 LPAL2Q16609 132 aa16.79■□□□□ 0.28
RABEPK-201ENST00000259460 ANKRD45Q5TZF3 282 aa16.79■□□□□ 0.28
RABEPK-201ENST00000259460 IER5Q5VY09 327 aa16.79■□□□□ 0.28
RABEPK-201ENST00000259460 VSIG10LQ86VR7 867 aa16.79■□□□□ 0.28
RABEPK-201ENST00000259460 TMEM87AQ8NBN3 555 aa16.79■□□□□ 0.28
RABEPK-201ENST00000259460 DDX1Q92499 740 aaKnown RBP16.79■□□□□ 0.28
RABEPK-201ENST00000259460 BCO2Q9BYV7 579 aa16.79■□□□□ 0.28
RABEPK-201ENST00000259460 UBA5Q9GZZ9 404 aa16.79■□□□□ 0.28
RABEPK-201ENST00000259460 LHX6Q9UPM6 363 aa16.79■□□□□ 0.28
RABEPK-201ENST00000259460 MBLAC1A4D2B0 266 aaPredicted RBP16.78■□□□□ 0.28
RABEPK-201ENST00000259460 N4BP1O75113 896 aaKnown RBP16.78■□□□□ 0.28
RABEPK-201ENST00000259460 SNHG28P0DPA3 235 aa16.78■□□□□ 0.28
RABEPK-201ENST00000259460 MARK3P27448 753 aa16.78■□□□□ 0.28
RABEPK-201ENST00000259460 CCND2P30279 289 aa16.78■□□□□ 0.28
RABEPK-201ENST00000259460 GBP2P32456 591 aaPredicted RBP16.78■□□□□ 0.28
RABEPK-201ENST00000259460 HSD17B4P51659 736 aa16.78■□□□□ 0.28
RABEPK-201ENST00000259460 IGBP1P78318 339 aa16.78■□□□□ 0.28
RABEPK-201ENST00000259460 NFX1Q12986 1120 aaKnown RBP16.78■□□□□ 0.28
RABEPK-201ENST00000259460 LETM2Q2VYF4 491 aa16.78■□□□□ 0.28
RABEPK-201ENST00000259460 SLC44A3Q8N4M1 653 aa16.78■□□□□ 0.28
RABEPK-201ENST00000259460 KBTBD3Q8NAB2 608 aa16.78■□□□□ 0.28
RABEPK-201ENST00000259460 SPG21Q9NZD8 308 aa16.78■□□□□ 0.28
RABEPK-201ENST00000259460 CNOT1A5YKK6 2376 aaKnown RBP16.78■□□□□ 0.28
RABEPK-201ENST00000259460 MAST4O15021 2626 aa16.77■□□□□ 0.28
RABEPK-201ENST00000259460 DENND3A2RUS2 1198 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms