RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 NLRC4Q9NPP4 1024 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 TMEM59LQ9UK28 342 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 PCDHA2Q9Y5H9 948 aa20.69■□□□□ 0.9
SNX4-201ENST00000251775 CYP3A7-CYP3A51PA0A087WV96 503 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 GMNCA6NCL1 334 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 GOLGA6L10A6NI86 522 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 CYP3A7P24462 503 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 ERVK-9P63128 1117 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 FKBP3Q00688 224 aaKnown RBP20.68■□□□□ 0.9
SNX4-201ENST00000251775 PPARDQ03181 441 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 UAP1Q16222 522 aaPredicted RBP20.68■□□□□ 0.9
SNX4-201ENST00000251775 SLC9C1Q4G0N8 1177 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 STRIP1Q5VSL9 837 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 KLHL7Q8IXQ5 586 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 OR2W6PQ8NHA6 318 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 CRYGNQ8WXF5 182 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 CCDC114Q96M63 670 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 ISCUQ9H1K1 167 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 BMP2KQ9NSY1 1161 aaPredicted RBP20.68■□□□□ 0.9
SNX4-201ENST00000251775 GCOM1H8Y6P7 765 aaPredicted RBP20.68■□□□□ 0.9
SNX4-201ENST00000251775 TRAF5O00463 557 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 KIF1CO43896 1103 aaKnown RBP20.68■□□□□ 0.9
SNX4-201ENST00000251775 MED24O75448 989 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 GDF11O95390 407 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 MYZAPP0CAP1 466 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 QPCTQ16769 361 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 MSL1Q68DK7 614 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 GPBP1Q86WP2 473 aa20.68■□□□□ 0.9
SNX4-201ENST00000251775 F5H6K3 240 aa20.67■□□□□ 0.9
SNX4-201ENST00000251775 DNM1LO00429 736 aa20.67■□□□□ 0.9
SNX4-201ENST00000251775 TRAPPC3O43617 180 aa20.67■□□□□ 0.9
SNX4-201ENST00000251775 ECE2O60344 883 aa20.67■□□□□ 0.9
SNX4-201ENST00000251775 TNNC1P63316 161 aa20.67■□□□□ 0.9
SNX4-201ENST00000251775 ICA1Q05084 483 aa20.67■□□□□ 0.9
SNX4-201ENST00000251775 KLRC3Q07444 240 aa20.67■□□□□ 0.9
SNX4-201ENST00000251775 C3orf20Q8ND61 904 aa20.67■□□□□ 0.9
SNX4-201ENST00000251775 TANGO6Q9C0B7 1094 aa20.67■□□□□ 0.9
SNX4-201ENST00000251775 COL4A3BPQ9Y5P4 624 aa20.67■□□□□ 0.9
SNX4-201ENST00000251775 SLX4Q8IY92 1834 aa20.67■□□□□ 0.9
SNX4-201ENST00000251775 NOL4O94818 638 aa20.67■□□□□ 0.9
SNX4-201ENST00000251775 SERPING1P05155 500 aa20.67■□□□□ 0.9
SNX4-201ENST00000251775 CYP11B2P19099 503 aa20.67■□□□□ 0.9
SNX4-201ENST00000251775 ZNF844Q08AG5 666 aa20.67■□□□□ 0.9
SNX4-201ENST00000251775 HLTFQ14527 1009 aaKnown RBP eCLIP20.67■□□□□ 0.9
SNX4-201ENST00000251775 NELFCDQ8IXH7 590 aa20.67■□□□□ 0.9
SNX4-201ENST00000251775 CCDC65Q8IXS2 484 aa20.67■□□□□ 0.9
SNX4-201ENST00000251775 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.67■□□□□ 0.9
SNX4-201ENST00000251775 ZNF219Q9P2Y4 722 aaPredicted RBP20.67■□□□□ 0.9
SNX4-201ENST00000251775 ELF1P32519 619 aa20.66■□□□□ 0.9
SNX4-201ENST00000251775 CDR1P51861 262 aa20.66■□□□□ 0.9
SNX4-201ENST00000251775 JAG1P78504 1218 aa20.66■□□□□ 0.9
SNX4-201ENST00000251775 ARHGAP4P98171 946 aa20.66■□□□□ 0.9
SNX4-201ENST00000251775 FAM228AQ86W67 206 aa20.66■□□□□ 0.9
SNX4-201ENST00000251775 FUKQ8N0W3 1084 aa20.66■□□□□ 0.9
SNX4-201ENST00000251775 EIF1ADQ8N9N8 165 aaKnown RBP20.66■□□□□ 0.9
SNX4-201ENST00000251775 CEP72Q9P209 647 aa20.66■□□□□ 0.9
SNX4-201ENST00000251775 TAL1P17542 331 aaPredicted RBP20.66■□□□□ 0.9
SNX4-201ENST00000251775 SPIRE1Q08AE8 756 aa20.66■□□□□ 0.9
SNX4-201ENST00000251775 ARSHQ5FYA8 562 aa20.66■□□□□ 0.9
SNX4-201ENST00000251775 SFMBT2Q5VUG0 894 aa20.66■□□□□ 0.9
SNX4-201ENST00000251775 CYB5D1Q6P9G0 228 aa20.66■□□□□ 0.9
SNX4-201ENST00000251775 TMEM179Q6ZVK1 233 aa20.66■□□□□ 0.9
SNX4-201ENST00000251775 SYN2Q92777 582 aaPredicted RBP20.66■□□□□ 0.9
SNX4-201ENST00000251775 SMCHD1A6NHR9 2005 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 POTEFA5A3E0 1075 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 POTEIP0CG38 1075 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 TMOD1P28289 359 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 FKBP1AP62942 108 aaKnown RBP20.65■□□□□ 0.9
SNX4-201ENST00000251775 AP3B2Q13367 1082 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 PRR16Q569H4 304 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 ANKRD20A8PQ5CZ79 823 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 HERC4Q5GLZ8 1057 aaPredicted RBP20.65■□□□□ 0.9
SNX4-201ENST00000251775 FAM83BQ5T0W9 1011 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 POTEGQ6S5H5 508 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 POTEEQ6S8J3 1075 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 ARHGAP27Q6ZUM4 889 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 PARP9Q8IXQ6 854 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 ETNPPLQ8TBG4 499 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 SCFD1Q8WVM8 642 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 AMNQ9BXJ7 453 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 PACSIN1Q9BY11 444 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 GOLGA6L7A0A1B0GV03 622 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 NDUFB10O96000 172 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 SLC12A3P55017 1021 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 BYSLQ13895 437 aaKnown RBP20.65■□□□□ 0.9
SNX4-201ENST00000251775 SNCBQ16143 134 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 USH1GQ495M9 461 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 MOXD1Q6UVY6 613 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 SLFN12Q8IYM2 578 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 TBC1D5Q92609 795 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 KCTD10Q9H3F6 313 aa20.65■□□□□ 0.9
SNX4-201ENST00000251775 LUC7LQ9NQ29 371 aaKnown RBP20.65■□□□□ 0.9
SNX4-201ENST00000251775 A0A087X0T9 212 aa20.64■□□□□ 0.9
SNX4-201ENST00000251775 FAM228BP0C875 321 aa20.64■□□□□ 0.9
SNX4-201ENST00000251775 SLC18A3Q16572 532 aa20.64■□□□□ 0.9
SNX4-201ENST00000251775 ABCB5Q2M3G0 1257 aa20.64■□□□□ 0.9
SNX4-201ENST00000251775 CATSPER3Q86XQ3 398 aa20.64■□□□□ 0.9
SNX4-201ENST00000251775 SEC16BQ96JE7 1060 aa20.64■□□□□ 0.9
SNX4-201ENST00000251775 NEUROG2Q9H2A3 272 aa20.64■□□□□ 0.9
SNX4-201ENST00000251775 CNOT8Q9UFF9 292 aaKnown RBP20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms