RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 ZCCHC18P0CG32 403 aa14.39□□□□□ -0.11
CCDC117-201ENST00000249064 CCNE1P24864 410 aa14.39□□□□□ -0.11
CCDC117-201ENST00000249064 PLCB3Q01970 1234 aa14.39□□□□□ -0.11
CCDC117-201ENST00000249064 RNF168Q8IYW5 571 aaPredicted RBP14.39□□□□□ -0.11
CCDC117-201ENST00000249064 C3orf20Q8ND61 904 aa14.39□□□□□ -0.11
CCDC117-201ENST00000249064 SLIT3O75094 1523 aa14.39□□□□□ -0.11
CCDC117-201ENST00000249064 GRIN2DO15399 1336 aa14.39□□□□□ -0.11
CCDC117-201ENST00000249064 POC1B-GALNT4F8VUJ3 575 aa14.39□□□□□ -0.11
CCDC117-201ENST00000249064 GRIK5Q16478 980 aa14.39□□□□□ -0.11
CCDC117-201ENST00000249064 LRRC36Q1X8D7 754 aa14.39□□□□□ -0.11
CCDC117-201ENST00000249064 HHATQ5VTY9 493 aa14.39□□□□□ -0.11
CCDC117-201ENST00000249064 APBB1IPQ7Z5R6 666 aaPredicted RBP14.39□□□□□ -0.11
CCDC117-201ENST00000249064 SUDS3Q9H7L9 328 aaPredicted RBP14.39□□□□□ -0.11
CCDC117-201ENST00000249064 METTL5Q9NRN9 209 aaKnown RBP14.39□□□□□ -0.11
CCDC117-201ENST00000249064 ATP6V0A2Q9Y487 856 aa14.39□□□□□ -0.11
CCDC117-201ENST00000249064 KLC1Q07866 573 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 ZYXQ15942 572 aaKnown RBP14.38□□□□□ -0.11
CCDC117-201ENST00000249064 IL17AQ16552 155 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 PDCD7Q8N8D1 485 aaKnown RBP14.38□□□□□ -0.11
CCDC117-201ENST00000249064 RDH13Q8NBN7 331 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 HIPK4Q8NE63 616 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 RAB3IL1Q8TBN0 382 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 NAF1Q96HR8 494 aaKnown RBP14.38□□□□□ -0.11
CCDC117-201ENST00000249064 PITPNM3Q9BZ71 974 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 TCEAL9Q9UHQ7 104 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 TRIM33Q9UPN9 1127 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 KIAA1024Q9UPX6 916 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 ZNF711Q9Y462 761 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 C5P01031 1676 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 LAMA4Q16363 1823 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 A8MUI8 341 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 RCSD1Q6JBY9 416 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 LARP4BQ92615 738 aaKnown RBP14.38□□□□□ -0.11
CCDC117-201ENST00000249064 SH3GL2Q99962 352 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 ABCF3Q9NUQ8 709 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 PCDHB13Q9Y5F0 798 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 SLURP2P0DP57 97 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 SKIP12755 728 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 KLRC1P26715 233 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 ALDH5A1P51649 535 aaPredicted RBP14.38□□□□□ -0.11
CCDC117-201ENST00000249064 HP1BP3Q5SSJ5 553 aaPredicted RBP14.38□□□□□ -0.11
CCDC117-201ENST00000249064 C12orf60Q5U649 245 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 SRRM1Q8IYB3 904 aaKnown RBP14.38□□□□□ -0.11
CCDC117-201ENST00000249064 ADSSL1Q8N142 457 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 CEP70Q8NHQ1 597 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 SHISA4Q96DD7 197 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 DCTN4Q9UJW0 460 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 PCDHA12Q9UN75 941 aa14.38□□□□□ -0.11
CCDC117-201ENST00000249064 FLOT1O75955 427 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 H2AFZP0C0S5 128 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 SKOR1P84550 965 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 CDC37Q16543 378 aaPredicted RBP14.37□□□□□ -0.11
CCDC117-201ENST00000249064 ANKRD20A3Q5VUR7 823 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 H2AFVQ71UI9 128 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 LRRC8CQ8TDW0 803 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 MTMR8Q96EF0 704 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 SHOX2O60902 331 aaPredicted RBP14.37□□□□□ -0.11
CCDC117-201ENST00000249064 PLCB4Q15147 1175 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 ANKRD20A2Q5SQ80 823 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 ANKRD20A1Q5TYW2 823 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 CDKAL1Q5VV42 579 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 ARL6IP4Q66PJ3 421 aaKnown RBP14.37□□□□□ -0.11
CCDC117-201ENST00000249064 DGKHQ86XP1 1220 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 ZNF483Q8TF39 744 aaPredicted RBP14.37□□□□□ -0.11
CCDC117-201ENST00000249064 ADAMTSL3P82987 1691 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 USP54Q70EL1 1684 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 NQO1P15559 274 aaKnown RBP14.37□□□□□ -0.11
CCDC117-201ENST00000249064 CCND1P24385 295 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 SLMAPQ14BN4 828 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 TBC1D10BQ4KMP7 808 aaPredicted RBP14.37□□□□□ -0.11
CCDC117-201ENST00000249064 PDXDC2PQ6P474 469 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 MTRQ99707 1265 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 PICK1Q9NRD5 415 aa14.37□□□□□ -0.11
CCDC117-201ENST00000249064 THAP12O43422 761 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 HLA-DOAP06340 250 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 HNRNPCP07910 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
CCDC117-201ENST00000249064 DR1Q01658 176 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 VWA3BQ502W6 1294 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 GPBP1Q86WP2 473 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 SLF2Q8IX21 1173 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 USP40Q9NVE5 1235 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 CFAP73A6NFT4 308 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 DCDC2CA8MYV0 355 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 USP17L15C9J2P7 530 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 USP17L13C9JLJ4 530 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 USP17L11C9JVI0 530 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 USP17L18D6R9N7 530 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 USP17L22D6RA61 530 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 USP17L17D6RBQ6 530 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 USP17L19D6RCP7 530 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 USP17L20D6RJB6 530 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 ADCY2Q08462 1091 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 USP17L24Q0WX57 530 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 CUL1Q13616 776 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 TTBK2Q6IQ55 1244 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 USP17L6PQ6QN14 398 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 HS2ST1Q7LGA3 356 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 ARHGEF1Q92888 912 aaKnown RBP14.36□□□□□ -0.11
CCDC117-201ENST00000249064 FAXDC2Q96IV6 333 aa14.36□□□□□ -0.11
CCDC117-201ENST00000249064 MXD3Q9BW11 206 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms