RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 USP17L1Q7RTZ2 530 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 NEK8Q86SG6 692 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 UHMK1Q8TAS1 419 aaKnown RBP13.54□□□□□ -0.24
NR1D1-201ENST00000246672 DDX12PQ92771 950 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 ARHGEF3Q9NR81 526 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 PAPOLBQ9NRJ5 636 aaKnown RBP13.54□□□□□ -0.24
NR1D1-201ENST00000246672 NUDT17P0C025 328 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 PAPOLAP51003 745 aaKnown RBP13.54□□□□□ -0.24
NR1D1-201ENST00000246672 ZNF131P52739 623 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 POU5F1Q01860 360 aaKnown RBP13.54□□□□□ -0.24
NR1D1-201ENST00000246672 MECOMQ03112 1051 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 NSUN4Q96CB9 384 aaKnown RBP13.54□□□□□ -0.24
NR1D1-201ENST00000246672 CDK5RAP3Q96JB5 506 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 CRNKL1Q9BZJ0 848 aaKnown RBP13.54□□□□□ -0.24
NR1D1-201ENST00000246672 ZMYND12Q9H0C1 365 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 NSRP1Q9H0G5 558 aaKnown RBP13.54□□□□□ -0.24
NR1D1-201ENST00000246672 CCDC134Q9H6E4 229 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 COL4A1P02462 1669 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 MAP3K13O43283 966 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 GNAT1P11488 350 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 CCNG1P51959 295 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 PMS2P54278 862 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 PTK2Q05397 1052 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 ARHGAP27Q6ZUM4 889 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 KRT25Q7Z3Z0 450 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 KCNK18Q7Z418 384 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 DAAM2Q86T65 1068 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 TBCKQ8TEA7 893 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 DYNLL2Q96FJ2 89 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 TSC22D3Q99576 134 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 NUDT12Q9BQG2 462 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 RAB17Q9H0T7 212 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 PABPC3Q9H361 631 aaKnown RBP13.54□□□□□ -0.24
NR1D1-201ENST00000246672 MCM9Q9NXL9 1143 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 TBC1D7Q9P0N9 293 aa13.54□□□□□ -0.24
NR1D1-201ENST00000246672 USP15Q9Y4E8 981 aaPredicted RBP13.54□□□□□ -0.24
NR1D1-201ENST00000246672 KAT6BQ8WYB5 2073 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 SMCO2A6NFE2 343 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 SPDYE3A6NKU9 549 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 CCDC169A6NNP5 214 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 HGSO14964 777 aaPredicted RBP13.53□□□□□ -0.24
NR1D1-201ENST00000246672 OAS1P00973 400 aaKnown RBP13.53□□□□□ -0.24
NR1D1-201ENST00000246672 SLCO1A2P46721 670 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 GNAQP50148 359 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 PDE6CP51160 858 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 FKBP3Q00688 224 aaKnown RBP13.53□□□□□ -0.24
NR1D1-201ENST00000246672 SLC29A2Q14542 456 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 PEX26Q7Z412 305 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 DGKHQ86XP1 1220 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 MYOCDQ8IZQ8 938 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 RASGEF1CQ8N431 466 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 NEK9Q8TD19 979 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 FGFBP2Q9BYJ0 223 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 CCDC113Q9H0I3 377 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 RIC8AQ9NPQ8 531 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 FGFR1OP2Q9NVK5 253 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 AIPL1Q9NZN9 384 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 GOLGA6L10A0A0M3HER8 536 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 POTEMA6NI47 508 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 BTNL10A8MVZ5 291 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 SMIM24O75264 130 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 FERP16591 822 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 COPB2P35606 906 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 TUBP50607 506 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 LACTBP83111 547 aaPredicted RBP13.53□□□□□ -0.24
NR1D1-201ENST00000246672 ATP11AP98196 1134 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 SEPT2Q15019 361 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 LRRC14Q15048 493 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 ZCWPW2Q504Y3 356 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 DENND2CQ68D51 928 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 CWF19L1Q69YN2 538 aaKnown RBP13.53□□□□□ -0.24
NR1D1-201ENST00000246672 ANO7Q6IWH7 933 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 ZNF571Q7Z3V5 609 aaPredicted RBP13.53□□□□□ -0.24
NR1D1-201ENST00000246672 NELFCDQ8IXH7 590 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 TPCN2Q8NHX9 752 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 ZDHHC18Q9NUE0 388 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 IRAK4Q9NWZ3 460 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 ARPP21Q9UBL0 812 aaPredicted RBP13.53□□□□□ -0.24
NR1D1-201ENST00000246672 BIN2Q9UBW5 565 aaPredicted RBP13.53□□□□□ -0.24
NR1D1-201ENST00000246672 STK17AQ9UEE5 414 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.53□□□□□ -0.24
NR1D1-201ENST00000246672 CCDC88AQ3V6T2 1871 aa13.53□□□□□ -0.24
NR1D1-201ENST00000246672 SPDYE5A6NIY4 337 aa13.52□□□□□ -0.24
NR1D1-201ENST00000246672 ADAMTS2O95450 1211 aa13.52□□□□□ -0.24
NR1D1-201ENST00000246672 ACTN1P12814 892 aa13.52□□□□□ -0.24
NR1D1-201ENST00000246672 PLTPP55058 493 aa13.52□□□□□ -0.24
NR1D1-201ENST00000246672 CNGA2Q16280 664 aa13.52□□□□□ -0.24
NR1D1-201ENST00000246672 CCDC38Q502W7 563 aa13.52□□□□□ -0.24
NR1D1-201ENST00000246672 ASRGL1Q7L266 308 aa13.52□□□□□ -0.24
NR1D1-201ENST00000246672 PROM2Q8N271 834 aa13.52□□□□□ -0.24
NR1D1-201ENST00000246672 FITM2Q8N6M3 262 aa13.52□□□□□ -0.24
NR1D1-201ENST00000246672 RAD54LQ92698 747 aa13.52□□□□□ -0.24
NR1D1-201ENST00000246672 PIDD1Q9HB75 910 aa13.52□□□□□ -0.24
NR1D1-201ENST00000246672 TMEM260Q9NX78 707 aa13.52□□□□□ -0.24
NR1D1-201ENST00000246672 NKX1-2Q9UD57 310 aaPredicted RBP13.52□□□□□ -0.24
NR1D1-201ENST00000246672 COL5A2P05997 1499 aaPredicted RBP13.52□□□□□ -0.25
NR1D1-201ENST00000246672 PLS1Q14651 629 aa13.52□□□□□ -0.25
NR1D1-201ENST00000246672 CAVIN4Q5BKX8 364 aa13.52□□□□□ -0.25
NR1D1-201ENST00000246672 SPDYCQ5MJ68 293 aa13.52□□□□□ -0.25
NR1D1-201ENST00000246672 ADAT2Q7Z6V5 191 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms