RNA–Protein interactions for RNA: ENST00000228264.10

DDX11-201, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-201ENST00000228264 C18orf8Q96DM3 657 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 FAM167BQ9BTA0 163 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 MTA3Q9BTC8 594 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 ZMYND12Q9H0C1 365 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 NAGPAQ9UK23 515 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.38□□□□□ -0.59
DDX11-201ENST00000228264 PALM3A6NDB9 673 aaPredicted RBP11.38□□□□□ -0.59
DDX11-201ENST00000228264 RASA1P20936 1047 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 IRX1P78414 480 aaPredicted RBP11.38□□□□□ -0.59
DDX11-201ENST00000228264 TEX11Q8IYF3 940 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 FBXO25Q8TCJ0 367 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 WHAMMQ8TF30 809 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 ARHGEF26Q96DR7 871 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 CEP95Q96GE4 821 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 CALML4Q96GE6 196 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 PYM1Q9BRP8 204 aaKnown RBP11.38□□□□□ -0.59
DDX11-201ENST00000228264 CEP72Q9P209 647 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 KIAA1024Q9UPX6 916 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 LRP5O75197 1615 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 POTEFA5A3E0 1075 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 KLHL33A6NCF5 533 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 ZBTB39O15060 712 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 PPIP5K2O43314 1243 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 LGR5O75473 907 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 GFPT2O94808 682 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 MMEP08473 750 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 POTEIP0CG38 1075 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 SLC29A2Q14542 456 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 TCERG1LQ5VWI1 586 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 PPP4R3AQ6IN85 833 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 ALKBH5Q6P6C2 394 aaKnown RBP11.38□□□□□ -0.59
DDX11-201ENST00000228264 POTEGQ6S5H5 508 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 POTEEQ6S8J3 1075 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 CCDC84Q86UT8 332 aaPredicted RBP11.38□□□□□ -0.59
DDX11-201ENST00000228264 GUF1Q8N442 669 aaKnown RBP11.38□□□□□ -0.59
DDX11-201ENST00000228264 ALG3Q92685 438 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 ZNF570Q96NI8 536 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 PAGR1Q9BTK6 254 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 STK38LQ9Y2H1 464 aa11.38□□□□□ -0.59
DDX11-201ENST00000228264 SSU72P8A0A1W2PR75 194 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 HERC4Q5GLZ8 1057 aaPredicted RBP11.37□□□□□ -0.59
DDX11-201ENST00000228264 AMIGO3Q86WK7 504 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 GLYCTKQ8IVS8 523 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 MYOCDQ8IZQ8 938 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 TPCN2Q8NHX9 752 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 U2AF1L4Q8WU68 220 aaKnown RBP11.37□□□□□ -0.59
DDX11-201ENST00000228264 ZNF317Q96PQ6 595 aaPredicted RBP11.37□□□□□ -0.59
DDX11-201ENST00000228264 SEC63Q9UGP8 760 aaKnown RBP11.37□□□□□ -0.59
DDX11-201ENST00000228264 DDX3XO00571 662 aaKnown RBP eCLIP11.37□□□□□ -0.59
DDX11-201ENST00000228264 KCNJ1P48048 391 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 IFFO1Q0D2I5 559 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 ADAM9Q13443 819 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 ASIC2Q16515 512 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 EMC10Q5UCC4 262 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 TRIM59Q8IWR1 403 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 OLIG1Q8TAK6 271 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 XPO6Q96QU8 1125 aaKnown RBP11.37□□□□□ -0.59
DDX11-201ENST00000228264 PTPN22Q9Y2R2 807 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 ENO4A6NNW6 628 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 USP17L15C9J2P7 530 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 USP17L13C9JLJ4 530 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 USP17L11C9JVI0 530 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 USP17L18D6R9N7 530 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 USP17L22D6RA61 530 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 USP17L17D6RBQ6 530 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 USP17L19D6RCP7 530 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 USP17L20D6RJB6 530 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 C21orf2O43822 256 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 UBOX5O94941 541 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 TRIM37O94972 964 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 UCHL3P15374 230 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 USP11P51784 963 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 USP17L24Q0WX57 530 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 USP17L6PQ6QN14 398 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 MICALCLQ6ZW33 695 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 PRUNE1Q86TP1 453 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 RNF10Q8N5U6 811 aaKnown RBP11.37□□□□□ -0.59
DDX11-201ENST00000228264 TAF4BQ92750 862 aa11.37□□□□□ -0.59
DDX11-201ENST00000228264 SRP68Q9UHB9 627 aaKnown RBP11.37□□□□□ -0.59
DDX11-201ENST00000228264 TMEM110-MUSTN1A8MSY1 372 aa11.36□□□□□ -0.59
DDX11-201ENST00000228264 ATMINO43313 823 aaPredicted RBP11.36□□□□□ -0.59
DDX11-201ENST00000228264 RTN2O75298 545 aa11.36□□□□□ -0.59
DDX11-201ENST00000228264 TNNC1P63316 161 aa11.36□□□□□ -0.59
DDX11-201ENST00000228264 PSMD2Q13200 908 aa11.36□□□□□ -0.59
DDX11-201ENST00000228264 COG2Q14746 738 aa11.36□□□□□ -0.59
DDX11-201ENST00000228264 ARSHQ5FYA8 562 aa11.36□□□□□ -0.59
DDX11-201ENST00000228264 FAM26FQ5R3K3 315 aa11.36□□□□□ -0.59
DDX11-201ENST00000228264 PEX26Q7Z412 305 aa11.36□□□□□ -0.59
DDX11-201ENST00000228264 REXO1Q8N1G1 1221 aaKnown RBP11.36□□□□□ -0.59
DDX11-201ENST00000228264 ATXN2LQ8WWM7 1075 aaKnown RBP11.36□□□□□ -0.59
DDX11-201ENST00000228264 KRT35Q92764 455 aa11.36□□□□□ -0.59
DDX11-201ENST00000228264 BTBD6Q96KE9 485 aa11.36□□□□□ -0.59
DDX11-201ENST00000228264 UBAP1LF5GYI3 381 aa11.36□□□□□ -0.59
DDX11-201ENST00000228264 MGRN1O60291 552 aa11.36□□□□□ -0.59
DDX11-201ENST00000228264 AKAP3O75969 853 aa11.36□□□□□ -0.59
DDX11-201ENST00000228264 ANP32DO95626 131 aa11.36□□□□□ -0.59
DDX11-201ENST00000228264 CALCAP01258 141 aa11.36□□□□□ -0.59
DDX11-201ENST00000228264 VIMP08670 466 aaKnown RBP11.36□□□□□ -0.59
DDX11-201ENST00000228264 GBP2P32456 591 aaPredicted RBP11.36□□□□□ -0.59
DDX11-201ENST00000228264 TBC1D10BQ4KMP7 808 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms