RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 VCXQ9H320 206 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 BCAP29Q9UHQ4 241 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 ARHGAP42A6NI28 874 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 TXNDC9O14530 226 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 HIP1RO75146 1068 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 OATP04181 439 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 FAM83BQ5T0W9 1011 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 RCSD1Q6JBY9 416 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 ARMC9Q7Z3E5 817 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 NEDD1Q8NHV4 660 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 FAN1Q9Y2M0 1017 aa12.43□□□□□ -0.42
NOD1-201ENST00000222823 LRRD1A4D1F6 860 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 EIF3CLB5ME19 914 aaKnown RBP12.42□□□□□ -0.42
NOD1-201ENST00000222823 E9PMD0 336 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 LIG3P49916 1009 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 GRM4Q14833 912 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 PHLDB2Q86SQ0 1253 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 SFR1Q86XK3 245 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 ELOA2Q8IYF1 753 aaPredicted RBP12.42□□□□□ -0.42
NOD1-201ENST00000222823 PROM2Q8N271 834 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.42□□□□□ -0.42
NOD1-201ENST00000222823 EIF3CQ99613 913 aaKnown RBP12.42□□□□□ -0.42
NOD1-201ENST00000222823 SNX25Q9H3E2 840 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 BARHL2Q9NY43 387 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 XRN1Q8IZH2 1706 aaKnown RBP12.42□□□□□ -0.42
NOD1-201ENST00000222823 PRR29P0C7W0 189 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 IREB2P48200 963 aaKnown RBP12.42□□□□□ -0.42
NOD1-201ENST00000222823 CLCN6P51797 869 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 CLNS1AP54105 237 aaKnown RBP12.42□□□□□ -0.42
NOD1-201ENST00000222823 ABI1Q8IZP0 508 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 TACO1Q9BSH4 297 aaKnown RBP12.42□□□□□ -0.42
NOD1-201ENST00000222823 SENP2Q9HC62 589 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 ANAPC5Q9UJX4 755 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 FOXN1O15353 648 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 MED7O43513 233 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 SUN1O94901 812 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 KRT1P04264 644 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 IL9RQ01113 521 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 SURF1Q15526 300 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 RC3H1Q5TC82 1133 aaKnown RBP12.42□□□□□ -0.42
NOD1-201ENST00000222823 SLFN12LQ6IEE8 588 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 RPUSD2Q8IZ73 545 aaKnown RBP12.42□□□□□ -0.42
NOD1-201ENST00000222823 CCNYQ8ND76 341 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 SCYL1Q96KG9 808 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 NLRP4Q96MN2 994 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 NBPF3Q9H094 633 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 SLIT3O75094 1523 aa12.42□□□□□ -0.42
NOD1-201ENST00000222823 MCF2LO15068 1137 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 ORC4O43929 436 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 MTMR1Q13613 665 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 NAA30Q147X3 362 aaPredicted RBP12.41□□□□□ -0.42
NOD1-201ENST00000222823 MCPH1Q8NEM0 835 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 NLRP7Q8WX94 980 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 MSTO1Q9BUK6 570 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 SPZ1Q9BXG8 430 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 EFCC1Q9HA90 598 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 JCADQ9P266 1359 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 MYO3BQ8WXR4 1341 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 DYNLT1P63172 113 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 QRICH1Q2TAL8 776 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 NXNQ6DKJ4 435 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 OR6B2Q6IFH4 312 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 NYAP1Q6ZVC0 841 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 RHOT2Q8IXI1 618 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 DPF2Q92785 391 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 LRRC4Q9HBW1 653 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 POLD4Q9HCU8 107 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 PIM2Q9P1W9 311 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 DNAJC12Q9UKB3 198 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 SPDYE16A6NNV3 312 aaPredicted RBP12.41□□□□□ -0.42
NOD1-201ENST00000222823 GSTA1P08263 222 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 GSTA2P09210 222 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 PTPAQ15257 358 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 SPDYE2Q495Y8 402 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 XXYLT1Q8NBI6 393 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 ABHD10Q9NUJ1 306 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 POTEB3A0JP26 581 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 POTECB2RU33 542 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 NR3C1P04150 777 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 ARL4AP40617 200 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 NFIXQ14938 502 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 PHLDB3Q6NSJ2 640 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 POTEBQ6S5H4 581 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 THNSL1Q8IYQ7 743 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 TMEM260Q9NX78 707 aa12.41□□□□□ -0.42
NOD1-201ENST00000222823 WDR64B1ANS9 1081 aa12.4□□□□□ -0.42
NOD1-201ENST00000222823 CTNND1O60716 968 aaKnown RBP12.4□□□□□ -0.42
NOD1-201ENST00000222823 CLTAP09496 248 aa12.4□□□□□ -0.42
NOD1-201ENST00000222823 GARSP41250 739 aaKnown RBP12.4□□□□□ -0.42
NOD1-201ENST00000222823 JAK3P52333 1124 aa12.4□□□□□ -0.42
NOD1-201ENST00000222823 SLC7A5Q01650 507 aa12.4□□□□□ -0.42
NOD1-201ENST00000222823 ADCY1Q08828 1119 aa12.4□□□□□ -0.42
NOD1-201ENST00000222823 MYO1EQ12965 1108 aa12.4□□□□□ -0.42
NOD1-201ENST00000222823 ORC2Q13416 577 aaPredicted RBP12.4□□□□□ -0.42
NOD1-201ENST00000222823 CASP8Q14790 479 aa12.4□□□□□ -0.42
NOD1-201ENST00000222823 PADI6Q6TGC4 694 aa12.4□□□□□ -0.42
NOD1-201ENST00000222823 FMO2Q99518 471 aa12.4□□□□□ -0.42
NOD1-201ENST00000222823 AP1M1Q9BXS5 423 aa12.4□□□□□ -0.42
NOD1-201ENST00000222823 SLC38A10Q9HBR0 1119 aa12.4□□□□□ -0.42
NOD1-201ENST00000222823 TBC1D22BQ9NU19 505 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms