RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 ANKRD13AQ8IZ07 590 aa18.98■□□□□ 0.63
RABGGTA-201ENST00000216840 PROCA1Q8NCQ7 364 aaPredicted RBP18.98■□□□□ 0.63
RABGGTA-201ENST00000216840 OTUD5Q96G74 571 aa18.98■□□□□ 0.63
RABGGTA-201ENST00000216840 SENP7Q9BQF6 1050 aa18.98■□□□□ 0.63
RABGGTA-201ENST00000216840 L2HGDHQ9H9P8 463 aa18.98■□□□□ 0.63
RABGGTA-201ENST00000216840 NDUFA10O95299 355 aa18.97■□□□□ 0.63
RABGGTA-201ENST00000216840 KCNA2P16389 499 aa18.97■□□□□ 0.63
RABGGTA-201ENST00000216840 YWHABP31946 246 aaKnown RBP18.97■□□□□ 0.63
RABGGTA-201ENST00000216840 NF2P35240 595 aa18.97■□□□□ 0.63
RABGGTA-201ENST00000216840 GNG11P61952 73 aa18.97■□□□□ 0.63
RABGGTA-201ENST00000216840 RDM1Q8NG50 284 aa18.97■□□□□ 0.63
RABGGTA-201ENST00000216840 MOV10L1Q9BXT6 1211 aaKnown RBP18.97■□□□□ 0.63
RABGGTA-201ENST00000216840 LZTFL1Q9NQ48 299 aa18.97■□□□□ 0.63
RABGGTA-201ENST00000216840 ZNHIT6Q9NWK9 470 aaKnown RBP18.97■□□□□ 0.63
RABGGTA-201ENST00000216840 TCEAL9Q9UHQ7 104 aa18.97■□□□□ 0.63
RABGGTA-201ENST00000216840 STAM2O75886 525 aa18.97■□□□□ 0.63
RABGGTA-201ENST00000216840 RPL13P26373 211 aaKnown RBP18.97■□□□□ 0.63
RABGGTA-201ENST00000216840 WDR24Q96S15 920 aa18.97■□□□□ 0.63
RABGGTA-201ENST00000216840 SPDYE5A6NIY4 337 aa18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 CXCL11O14625 94 aa18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 CLIC2O15247 247 aa18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 HNRNPH3P31942 346 aaKnown RBP18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 CDK17Q00537 523 aa18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 NFIL3Q16649 462 aa18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 STXBP4Q6ZWJ1 553 aa18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 RIOX2Q8IUF8 465 aa18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 KSR1Q8IVT5 923 aa18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 NEK11Q8NG66 645 aa18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 STRA6Q9BX79 667 aa18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 IKZF4Q9H2S9 585 aa18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 ARMCX3Q9UH62 379 aaPredicted RBP18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 REXO2Q9Y3B8 237 aaKnown RBP18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 TMEM150BA6NC51 233 aa18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 SLC16A3O15427 465 aaKnown RBP18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 AKAP3O75969 853 aa18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 KCNH2Q12809 1159 aa18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 TTLL12Q14166 644 aaPredicted RBP18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 MAEAQ7L5Y9 396 aa18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 EDEM3Q9BZQ6 932 aa18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 PCDHB13Q9Y5F0 798 aa18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 PCDHA10Q9Y5I2 948 aa18.96■□□□□ 0.63
RABGGTA-201ENST00000216840 NFASCO94856 1347 aa18.95■□□□□ 0.62
RABGGTA-201ENST00000216840 SPATA31C2B4DYI2 1134 aa18.95■□□□□ 0.62
RABGGTA-201ENST00000216840 BACH1O14867 736 aa18.95■□□□□ 0.62
RABGGTA-201ENST00000216840 PPP1R37O75864 691 aa18.95■□□□□ 0.62
RABGGTA-201ENST00000216840 CASP4P49662 377 aa18.95■□□□□ 0.62
RABGGTA-201ENST00000216840 ANKRD35Q8N283 1001 aa18.95■□□□□ 0.62
RABGGTA-201ENST00000216840 DNERQ8NFT8 737 aa18.95■□□□□ 0.62
RABGGTA-201ENST00000216840 BAP1Q92560 729 aa18.95■□□□□ 0.62
RABGGTA-201ENST00000216840 CDHR1Q96JP9 859 aa18.95■□□□□ 0.62
RABGGTA-201ENST00000216840 IWS1Q96ST2 819 aa18.95■□□□□ 0.62
RABGGTA-201ENST00000216840 IRX2Q9BZI1 471 aaPredicted RBP18.95■□□□□ 0.62
RABGGTA-201ENST00000216840 NHEJ1Q9H9Q4 299 aaPredicted RBP18.95■□□□□ 0.62
RABGGTA-201ENST00000216840 ANKEF1Q9NU02 776 aa18.95■□□□□ 0.62
RABGGTA-201ENST00000216840 PLAGL2Q9UPG8 496 aa18.95■□□□□ 0.62
RABGGTA-201ENST00000216840 KCNH4Q9UQ05 1017 aa18.95■□□□□ 0.62
RABGGTA-201ENST00000216840 SCN4AP35499 1836 aa18.95■□□□□ 0.62
RABGGTA-201ENST00000216840 USO1O60763 962 aaKnown RBP18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 NOL4O94818 638 aa18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 CASQ1P31415 396 aa18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 ARHGAP25P42331 645 aa18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 CNTN2Q02246 1040 aa18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 UTP14CQ5TAP6 766 aaKnown RBP18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 SH2D3AQ9BRG2 576 aa18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 FBXO40Q9UH90 709 aa18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 ARID2Q68CP9 1835 aa18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 PFASO15067 1338 aa18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 EPB41P11171 864 aaKnown RBP18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 IRX3P78415 501 aaPredicted RBP18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 PPP2R3AQ06190 1150 aa18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 PPIL2Q13356 520 aa18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 GNPTABQ3T906 1256 aa18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 SMAP1Q8IYB5 467 aaPredicted RBP18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 CCDC170Q8IYT3 715 aa18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 CCDC43Q96MW1 224 aaKnown RBP18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 LSM14BQ9BX40 385 aaKnown RBP18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 SPATC1LQ9H0A9 340 aa18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 METTL14Q9HCE5 456 aaKnown RBP18.94■□□□□ 0.62
RABGGTA-201ENST00000216840 GLTPD2A6NH11 291 aa18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 LRRC53A6NM62 1247 aa18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 ABL1P00519 1130 aa18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 MAPTP10636 758 aaKnown RBP18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 ARHGAP29Q52LW3 1261 aa18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 XKR9Q5GH70 373 aa18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 PLA2G4FQ68DD2 849 aa18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 PDXDC1Q6P996 788 aa18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 RRAGAQ7L523 313 aa18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 CRACR2AQ9BSW2 395 aa18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 TIPINQ9BVW5 301 aa18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 ASCC2Q9H1I8 757 aaPredicted RBP18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 JPH1Q9HDC5 661 aaPredicted RBP18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 CEP72Q9P209 647 aa18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 LARSQ9P2J5 1176 aaKnown RBP18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 ZNF215Q9UL58 517 aaPredicted RBP18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 TELO2Q9Y4R8 837 aa18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 CNMDO75829 334 aa18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 PLS3P13797 630 aa18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 CYLC1P35663 651 aaPredicted RBP18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 NPEPPSP55786 919 aa18.93■□□□□ 0.62
RABGGTA-201ENST00000216840 HERVK_113P62684 666 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms