RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Fgd5Q80UZ0 1219 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Rnaseh2bQ80ZV0 308 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 AarsQ8BGQ7 968 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Snx14Q8BHY8 964 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ythdf3Q8BYK6 585 aaKnown RBP14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Vps37cQ8R105 352 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 F11Q91Y47 624 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Q9D5Q8 446 aa14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Cse1lQ9ERK4 971 aaKnown RBP14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Pacsin2Q9WVE8 486 aaKnown RBP14.06□□□□□ -0.16
Nup88-203ENSMUST00000108531 Scgb2b7D3YYY1 112 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ccdc78D3Z5T1 437 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Gm6121L7MUF1 212 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Clcn6O35454 870 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Mybl2P48972 704 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Snap25P60879 206 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Igf2bp2Q5SF07 592 aaKnown RBP14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Klra5Q60652 266 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Map3k12Q60700 888 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Nell2Q61220 819 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Atp2b4Q6Q477 1205 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Tmc4Q7TQ65 694 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Rassf10Q8BL43 508 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Scfd2Q8BTY8 684 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Slc12a6Q924N4 1150 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Pstpip2Q99M15 334 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Eya4Q9Z191 616 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 1700017N19RikA0A087WPJ1 469 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ttc13A0A1L1SSC7 844 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Kiaa1522A2A7S8 1013 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Gm14525B1AZA0 212 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Gm2012B1B0R1 212 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Usp17lbE9Q9U0 468 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Gdap1O88741 358 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 FosP01101 380 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Hnrnph2P70333 449 aaKnown RBP14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Fam107bQ3TGF2 131 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Cracr2aQ3UP38 310 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Gm14819Q62478 212 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Lilrb4Q64281 335 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Lrig3Q6P1C6 1117 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Taok3Q8BYC6 898 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Akt1s1Q9D1F4 257 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 SmapQ9R0P4 181 aaKnown RBP14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ankrd2Q9WV06 328 aa14.05□□□□□ -0.16
Nup88-203ENSMUST00000108531 Sema4dO09126 861 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Cpsf2O35218 782 aaKnown RBP14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Hnrnph1O35737 449 aaKnown RBP14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ephb4P54761 987 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Phactr1Q2M3X8 580 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Xxylt1Q3U4G3 392 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Trip13Q3UA06 432 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Fbxo11Q7TPD1 930 aaKnown RBP14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ccdc113Q8C5T8 377 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Anapc4Q91W96 807 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Fthl17aQ9DAX0 182 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Azi2Q9QYP6 405 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Zfp174B9EJW5 407 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Gm3095E9Q058 166 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Eif3dO70194 548 aaKnown RBP14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Rnaseh1O70338 285 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Pkn1P70268 946 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Dok7Q18PE0 504 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Znf652Q5DU09 608 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Cyfip2Q5SQX6 1253 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Tspyl5Q69ZB3 406 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Rps6ka6Q7TPS0 764 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Celf4Q7TSY6 486 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ms4a5Q810P8 197 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 FtoQ8BGW1 502 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ccdc15Q8C9M2 810 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Lrrc42Q8R2U7 421 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Arhgef7Q9ES28 862 aa14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Hyou1Q9JKR6 999 aaKnown RBP14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Cdc42ep4Q9JM96 349 aaKnown RBP14.04□□□□□ -0.16
Nup88-203ENSMUST00000108531 Lrrc38A2VDH3 298 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Fbxw10Q5SUS0 1030 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 AdalQ80SY6 360 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Scfd1Q8BRF7 639 aaKnown RBP14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Tbc1d10cQ8C9V1 444 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Lrrc45Q8CIM1 670 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Tbx22Q8K402 517 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Psma8Q9CWH6 250 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Rabl3Q9D4V7 236 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Nup50Q9JIH2 466 aaKnown RBP14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Wdr72D3YYM4 1114 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Mmp14P53690 582 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Tex11Q14AT2 947 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Brip1Q5SXJ3 1174 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ppp2r2aQ6P1F6 447 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Als2cr12Q8BVM7 383 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ttc16Q8C1F5 767 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Ccdc186Q8C9S4 917 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Enox2Q8R0Z2 598 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Llcfc1Q9D9P8 108 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Uchl3Q9JKB1 230 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Tlr2Q9QUN7 784 aa14.03□□□□□ -0.16
Nup88-203ENSMUST00000108531 Gm10110D3Z5M2 615 aa14.02□□□□□ -0.16
Nup88-203ENSMUST00000108531 Tnfrsf11aO35305 625 aa14.02□□□□□ -0.16
Nup88-203ENSMUST00000108531 Nmt1O70310 496 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 83.9 ms