RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 KNOP1Q1ED39 458 aaKnown RBP15.96■□□□□ 0.15
SCARB2-221ENST00000640341 CERKLQ49MI3 558 aaPredicted RBP15.96■□□□□ 0.15
SCARB2-221ENST00000640341 RBM46Q8TBY0 533 aaKnown RBP15.96■□□□□ 0.15
SCARB2-221ENST00000640341 CHORDC1Q9UHD1 332 aaPredicted RBP15.96■□□□□ 0.15
SCARB2-221ENST00000640341 GAKO14976 1311 aa15.96■□□□□ 0.15
SCARB2-221ENST00000640341 ABCB11O95342 1321 aa15.96■□□□□ 0.15
SCARB2-221ENST00000640341 FAM86B1E9PN63 330 aa15.96■□□□□ 0.15
SCARB2-221ENST00000640341 ERLIN2O94905 339 aa15.96■□□□□ 0.15
SCARB2-221ENST00000640341 FAM86B2P0C5J1 330 aa15.96■□□□□ 0.15
SCARB2-221ENST00000640341 SNHG28P0DPA3 235 aa15.96■□□□□ 0.15
SCARB2-221ENST00000640341 GCFC2P16383 781 aaKnown RBP15.96■□□□□ 0.15
SCARB2-221ENST00000640341 NR1D1P20393 614 aa15.96■□□□□ 0.15
SCARB2-221ENST00000640341 IBSPP21815 317 aaPredicted RBP15.96■□□□□ 0.15
SCARB2-221ENST00000640341 CYP2J2P51589 502 aa15.96■□□□□ 0.15
SCARB2-221ENST00000640341 TADA2BQ86TJ2 420 aa15.96■□□□□ 0.15
SCARB2-221ENST00000640341 MYCT1Q8N699 235 aa15.96■□□□□ 0.15
SCARB2-221ENST00000640341 PCDHA2Q9Y5H9 948 aa15.96■□□□□ 0.15
SCARB2-221ENST00000640341 GRIN2DO15399 1336 aa15.96■□□□□ 0.15
SCARB2-221ENST00000640341 SMIM23A6NLE4 172 aa15.96■□□□□ 0.14
SCARB2-221ENST00000640341 PPEF1O14829 653 aaPredicted RBP15.96■□□□□ 0.14
SCARB2-221ENST00000640341 ATP2C2O75185 946 aa15.96■□□□□ 0.14
SCARB2-221ENST00000640341 PON1P27169 355 aa15.96■□□□□ 0.14
SCARB2-221ENST00000640341 NMT1P30419 496 aaKnown RBP15.96■□□□□ 0.14
SCARB2-221ENST00000640341 CTNNA1P35221 906 aaKnown RBP15.96■□□□□ 0.14
SCARB2-221ENST00000640341 CLK2P49760 499 aaKnown RBP15.96■□□□□ 0.14
SCARB2-221ENST00000640341 NT5C2P49902 561 aa15.96■□□□□ 0.14
SCARB2-221ENST00000640341 ERVK-9P63128 1117 aa15.96■□□□□ 0.14
SCARB2-221ENST00000640341 GIT2Q14161 759 aa15.96■□□□□ 0.14
SCARB2-221ENST00000640341 INPP4AQ96PE3 977 aaPredicted RBP15.96■□□□□ 0.14
SCARB2-221ENST00000640341 RUSC1Q9BVN2 902 aa15.96■□□□□ 0.14
SCARB2-221ENST00000640341 GANQ9H2C0 597 aa15.96■□□□□ 0.14
SCARB2-221ENST00000640341 GOPCQ9HD26 462 aa15.96■□□□□ 0.14
SCARB2-221ENST00000640341 NAGPAQ9UK23 515 aa15.96■□□□□ 0.14
SCARB2-221ENST00000640341 E7EVH7 732 aa15.95■□□□□ 0.14
SCARB2-221ENST00000640341 SART1O43290 800 aaKnown RBP15.95■□□□□ 0.14
SCARB2-221ENST00000640341 LRRN2O75325 713 aa15.95■□□□□ 0.14
SCARB2-221ENST00000640341 BBOX1O75936 387 aa15.95■□□□□ 0.14
SCARB2-221ENST00000640341 CFBP00751 764 aa15.95■□□□□ 0.14
SCARB2-221ENST00000640341 ITIH3Q06033 890 aa15.95■□□□□ 0.14
SCARB2-221ENST00000640341 GLYCTKQ8IVS8 523 aa15.95■□□□□ 0.14
SCARB2-221ENST00000640341 ERMNQ8TAM6 284 aa15.95■□□□□ 0.14
SCARB2-221ENST00000640341 TEKT1Q969V4 418 aa15.95■□□□□ 0.14
SCARB2-221ENST00000640341 OSGEPQ9NPF4 335 aa15.95■□□□□ 0.14
SCARB2-221ENST00000640341 KIAA0754O94854 1291 aa15.95■□□□□ 0.14
SCARB2-221ENST00000640341 KIF4AO95239 1232 aa15.95■□□□□ 0.14
SCARB2-221ENST00000640341 NR3C1P04150 777 aa15.95■□□□□ 0.14
SCARB2-221ENST00000640341 SLC12A3P55017 1021 aa15.95■□□□□ 0.14
SCARB2-221ENST00000640341 LAMB2P55268 1798 aa15.95■□□□□ 0.14
SCARB2-221ENST00000640341 ZYXQ15942 572 aaKnown RBP15.95■□□□□ 0.14
SCARB2-221ENST00000640341 FAM163AQ96GL9 167 aaPredicted RBP15.95■□□□□ 0.14
SCARB2-221ENST00000640341 EDEM3Q9BZQ6 932 aa15.95■□□□□ 0.14
SCARB2-221ENST00000640341 DDTLA6NHG4 134 aaPredicted RBP15.94■□□□□ 0.14
SCARB2-221ENST00000640341 DAPK3O43293 454 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 EPB41P11171 864 aaKnown RBP15.94■□□□□ 0.14
SCARB2-221ENST00000640341 INPP5BP32019 993 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 ICA1Q05084 483 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 COG2Q14746 738 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 METTL13Q8N6R0 699 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 GDF3Q9NR23 364 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 PCDHGC5Q9Y5F6 944 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 FLOT1O75955 427 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 TRIM49P0CI25 452 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 TRIM49CP0CI26 452 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 POLD1P28340 1107 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 ZNF211Q13398 564 aaPredicted RBP15.94■□□□□ 0.14
SCARB2-221ENST00000640341 IRF2BP2Q7Z5L9 587 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 EFCAB13Q8IY85 973 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 CAVIN3Q969G5 261 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 SH3GL2Q99962 352 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 NOC2LQ9Y3T9 749 aaKnown RBP15.94■□□□□ 0.14
SCARB2-221ENST00000640341 MYH1P12882 1939 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 TMEM110-MUSTN1A8MSY1 372 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 DDX39AO00148 427 aaKnown RBP15.94■□□□□ 0.14
SCARB2-221ENST00000640341 SHOX2O60902 331 aaPredicted RBP15.94■□□□□ 0.14
SCARB2-221ENST00000640341 FLT3P36888 993 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 USP8P40818 1118 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 MKRN4PQ13434 485 aaPredicted RBP15.94■□□□□ 0.14
SCARB2-221ENST00000640341 GLE1Q53GS7 698 aaKnown RBP15.94■□□□□ 0.14
SCARB2-221ENST00000640341 VPS36Q86VN1 386 aa15.94■□□□□ 0.14
SCARB2-221ENST00000640341 RBAK-RBAKDNI3L0D1 243 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 MEIS2O14770 477 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 FAM13AO94988 1023 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 H2AFZP0C0S5 128 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 GBP6Q6ZN66 633 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 H2AFVQ71UI9 128 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 IQCKQ8N0W5 287 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 UHMK1Q8TAS1 419 aaKnown RBP15.93■□□□□ 0.14
SCARB2-221ENST00000640341 ZNF622Q969S3 477 aaKnown RBP eCLIP15.93■□□□□ 0.14
SCARB2-221ENST00000640341 SH2D3AQ9BRG2 576 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 DNAJC18Q9H819 358 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 AIPL1Q9NZN9 384 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 F5H6K3 240 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 TTI1O43156 1089 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 CALUO43852 315 aaPredicted RBP15.93■□□□□ 0.14
SCARB2-221ENST00000640341 TMOD1P28289 359 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 LSP1P33241 339 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 KLRC3Q07444 240 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 DDR1Q08345 913 aa15.93■□□□□ 0.14
SCARB2-221ENST00000640341 ZNF572Q7Z3I7 529 aaPredicted RBP15.93■□□□□ 0.14
SCARB2-221ENST00000640341 SLFN12Q8IYM2 578 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms