RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 CCDC175P0C221 793 aa21.74■■□□□ 1.07
TREX1-205ENST00000625293 GAP43P17677 238 aa21.74■■□□□ 1.07
TREX1-205ENST00000625293 NF2P35240 595 aa21.74■■□□□ 1.07
TREX1-205ENST00000625293 RMDN3Q96TC7 470 aa21.74■■□□□ 1.07
TREX1-205ENST00000625293 LXNQ9BS40 222 aa21.74■■□□□ 1.07
TREX1-205ENST00000625293 MRPL44Q9H9J2 332 aaKnown RBP21.74■■□□□ 1.07
TREX1-205ENST00000625293 TRAF3IP3Q9Y228 551 aa21.74■■□□□ 1.07
TREX1-205ENST00000625293 FANCGO15287 622 aa21.73■■□□□ 1.07
TREX1-205ENST00000625293 TBCAO75347 108 aaKnown RBP21.73■■□□□ 1.07
TREX1-205ENST00000625293 GNA14O95837 355 aa21.73■■□□□ 1.07
TREX1-205ENST00000625293 MTMR1Q13613 665 aa21.73■■□□□ 1.07
TREX1-205ENST00000625293 TMEM132BQ14DG7 1078 aa21.73■■□□□ 1.07
TREX1-205ENST00000625293 SNRNP48Q6IEG0 339 aaKnown RBP21.73■■□□□ 1.07
TREX1-205ENST00000625293 XRRA1Q6P2D8 792 aa21.73■■□□□ 1.07
TREX1-205ENST00000625293 IQCDQ96DY2 449 aa21.73■■□□□ 1.07
TREX1-205ENST00000625293 BCAS3Q9H6U6 928 aa21.73■■□□□ 1.07
TREX1-205ENST00000625293 TMOD4Q9NZQ9 345 aa21.73■■□□□ 1.07
TREX1-205ENST00000625293 KCND2Q9NZV8 630 aa21.73■■□□□ 1.07
TREX1-205ENST00000625293 MYBP10242 640 aa21.72■■□□□ 1.07
TREX1-205ENST00000625293 ZNF157P51786 506 aaPredicted RBP21.72■■□□□ 1.07
TREX1-205ENST00000625293 ZNF131P52739 623 aa21.72■■□□□ 1.07
TREX1-205ENST00000625293 MAP3K9P80192 1104 aa21.72■■□□□ 1.07
TREX1-205ENST00000625293 BAATQ14032 418 aaPredicted RBP21.72■■□□□ 1.07
TREX1-205ENST00000625293 VGLL4Q14135 290 aa21.72■■□□□ 1.07
TREX1-205ENST00000625293 MEA1Q16626 185 aa21.72■■□□□ 1.07
TREX1-205ENST00000625293 RGMBQ6NW40 437 aa21.72■■□□□ 1.07
TREX1-205ENST00000625293 WDR59Q6PJI9 974 aa21.72■■□□□ 1.07
TREX1-205ENST00000625293 NSMFQ6X4W1 530 aa21.72■■□□□ 1.07
TREX1-205ENST00000625293 MIER3Q7Z3K6 550 aa21.72■■□□□ 1.07
TREX1-205ENST00000625293 CLMNQ96JQ2 1002 aa21.72■■□□□ 1.07
TREX1-205ENST00000625293 PURBQ96QR8 312 aaKnown RBP21.72■■□□□ 1.07
TREX1-205ENST00000625293 SPDYE16A6NNV3 312 aaPredicted RBP21.71■■□□□ 1.07
TREX1-205ENST00000625293 KNOP1Q1ED39 458 aaKnown RBP21.71■■□□□ 1.07
TREX1-205ENST00000625293 MAF1Q9H063 256 aa21.71■■□□□ 1.07
TREX1-205ENST00000625293 L2HGDHQ9H9P8 463 aa21.71■■□□□ 1.07
TREX1-205ENST00000625293 TBC1D22BQ9NU19 505 aa21.71■■□□□ 1.07
TREX1-205ENST00000625293 COL11A1P12107 1806 aaPredicted RBP21.71■■□□□ 1.07
TREX1-205ENST00000625293 DDX39AO00148 427 aaKnown RBP21.71■■□□□ 1.07
TREX1-205ENST00000625293 ZBED6P86452 979 aa21.71■■□□□ 1.07
TREX1-205ENST00000625293 TRIM59Q8IWR1 403 aa21.71■■□□□ 1.07
TREX1-205ENST00000625293 BANK1Q8NDB2 785 aa21.71■■□□□ 1.07
TREX1-205ENST00000625293 FIZ1Q96SL8 496 aa21.71■■□□□ 1.07
TREX1-205ENST00000625293 AGPAT5Q9NUQ2 364 aa21.71■■□□□ 1.07
TREX1-205ENST00000625293 PKD2L1Q9P0L9 805 aa21.71■■□□□ 1.07
TREX1-205ENST00000625293 FAM155AB1AL88 458 aaPredicted RBP21.7■■□□□ 1.06
TREX1-205ENST00000625293 PDXKO00764 312 aa21.7■■□□□ 1.06
TREX1-205ENST00000625293 LYPLA2O95372 231 aa21.7■■□□□ 1.06
TREX1-205ENST00000625293 P4HBP07237 508 aaKnown RBP21.7■■□□□ 1.06
TREX1-205ENST00000625293 TRIM21P19474 475 aaKnown RBP21.7■■□□□ 1.06
TREX1-205ENST00000625293 GUCY2CP25092 1073 aa21.7■■□□□ 1.06
TREX1-205ENST00000625293 MKRN3Q13064 507 aaKnown RBP21.7■■□□□ 1.06
TREX1-205ENST00000625293 ARHGEF16Q5VV41 709 aa21.7■■□□□ 1.06
TREX1-205ENST00000625293 VSIG10LQ86VR7 867 aa21.7■■□□□ 1.06
TREX1-205ENST00000625293 CHP1Q99653 195 aa21.7■■□□□ 1.06
TREX1-205ENST00000625293 TEX13BQ9BXU2 312 aa21.7■■□□□ 1.06
TREX1-205ENST00000625293 ODF2LQ9ULJ1 636 aa21.7■■□□□ 1.06
TREX1-205ENST00000625293 EIF3DO15371 548 aaKnown RBP eCLIP21.69■■□□□ 1.06
TREX1-205ENST00000625293 PPP1R12BO60237 982 aaPredicted RBP21.69■■□□□ 1.06
TREX1-205ENST00000625293 PRPF6O94906 941 aaKnown RBP21.69■■□□□ 1.06
TREX1-205ENST00000625293 MYCLP12524 364 aaPredicted RBP21.69■■□□□ 1.06
TREX1-205ENST00000625293 FKBP1BP68106 108 aa21.69■■□□□ 1.06
TREX1-205ENST00000625293 LDLRAD1Q5T700 205 aa21.69■■□□□ 1.06
TREX1-205ENST00000625293 ARMC9Q7Z3E5 817 aa21.69■■□□□ 1.06
TREX1-205ENST00000625293 HHIPL1Q96JK4 782 aa21.69■■□□□ 1.06
TREX1-205ENST00000625293 ZSWIM4Q9H7M6 989 aa21.69■■□□□ 1.06
TREX1-205ENST00000625293 HOXC10Q9NYD6 342 aa21.69■■□□□ 1.06
TREX1-205ENST00000625293 SEL1LQ9UBV2 794 aa21.69■■□□□ 1.06
TREX1-205ENST00000625293 DNAI1Q9UI46 699 aa21.69■■□□□ 1.06
TREX1-205ENST00000625293 LOC285556D6RIA3 1793 aa21.69■■□□□ 1.06
TREX1-205ENST00000625293 FAM13AO94988 1023 aa21.69■■□□□ 1.06
TREX1-205ENST00000625293 ADAM9Q13443 819 aa21.69■■□□□ 1.06
TREX1-205ENST00000625293 CCDC40Q4G0X9 1142 aa21.69■■□□□ 1.06
TREX1-205ENST00000625293 TSC1Q92574 1164 aa21.69■■□□□ 1.06
TREX1-205ENST00000625293 PARVGQ9HBI0 331 aa21.69■■□□□ 1.06
TREX1-205ENST00000625293 POLD4Q9HCU8 107 aa21.69■■□□□ 1.06
TREX1-205ENST00000625293 ASTN1O14525 1302 aa21.68■■□□□ 1.06
TREX1-205ENST00000625293 ATP9AO75110 1047 aa21.68■■□□□ 1.06
TREX1-205ENST00000625293 CCND2P30279 289 aa21.68■■□□□ 1.06
TREX1-205ENST00000625293 ACRBPQ8NEB7 543 aa21.68■■□□□ 1.06
TREX1-205ENST00000625293 TYW1Q9NV66 732 aaKnown RBP21.68■■□□□ 1.06
TREX1-205ENST00000625293 CYP39A1Q9NYL5 469 aa21.68■■□□□ 1.06
TREX1-205ENST00000625293 DBR1Q9UK59 544 aaKnown RBP21.68■■□□□ 1.06
TREX1-205ENST00000625293 A0A0U1RQJ8 604 aa21.67■■□□□ 1.06
TREX1-205ENST00000625293 SFI1A8K8P3 1242 aa21.67■■□□□ 1.06
TREX1-205ENST00000625293 CETN3O15182 167 aa21.67■■□□□ 1.06
TREX1-205ENST00000625293 EPHB6O15197 1021 aa21.67■■□□□ 1.06
TREX1-205ENST00000625293 CALUO43852 315 aaPredicted RBP21.67■■□□□ 1.06
TREX1-205ENST00000625293 GCNT3O95395 438 aa21.67■■□□□ 1.06
TREX1-205ENST00000625293 NR3C2P08235 984 aa21.67■■□□□ 1.06
TREX1-205ENST00000625293 NR2F2P24468 414 aa21.67■■□□□ 1.06
TREX1-205ENST00000625293 HNRNPH3P31942 346 aaKnown RBP21.67■■□□□ 1.06
TREX1-205ENST00000625293 CDK17Q00537 523 aa21.67■■□□□ 1.06
TREX1-205ENST00000625293 KCNMA1Q12791 1236 aa21.67■■□□□ 1.06
TREX1-205ENST00000625293 MAPK7Q13164 816 aa21.67■■□□□ 1.06
TREX1-205ENST00000625293 ATRIPQ8WXE1 791 aa21.67■■□□□ 1.06
TREX1-205ENST00000625293 GPRASP2Q96D09 838 aa21.67■■□□□ 1.06
TREX1-205ENST00000625293 PCMTD1Q96MG8 357 aaPredicted RBP21.67■■□□□ 1.06
TREX1-205ENST00000625293 INPP4AQ96PE3 977 aaPredicted RBP21.67■■□□□ 1.06
TREX1-205ENST00000625293 ACAD9Q9H845 621 aa21.67■■□□□ 1.06
TREX1-205ENST00000625293 OTOFQ9HC10 1997 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms