RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 LCORLQ8N3X6 602 aa18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 KIFC3Q9BVG8 833 aa18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 SAMSN1Q9NSI8 373 aaKnown RBP18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 GOLGA8SH3BPF8 625 aa18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 PAMP19021 973 aa18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 DPP9Q86TI2 863 aa18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 DEPDC1BQ8WUY9 529 aa18.71■□□□□ 0.59
HMGXB3-206ENST00000613459 NLRP1Q9C000 1473 aa18.71■□□□□ 0.58
HMGXB3-206ENST00000613459 LRRN2O75325 713 aa18.71■□□□□ 0.58
HMGXB3-206ENST00000613459 ZBED1O96006 694 aa18.71■□□□□ 0.58
HMGXB3-206ENST00000613459 OR6B2Q6IFH4 312 aa18.71■□□□□ 0.58
HMGXB3-206ENST00000613459 ALKBH5Q6P6C2 394 aaKnown RBP18.71■□□□□ 0.58
HMGXB3-206ENST00000613459 VPS39Q96JC1 886 aa18.71■□□□□ 0.58
HMGXB3-206ENST00000613459 KRT31Q15323 416 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 WDR70Q9NW82 654 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 HEG1Q9ULI3 1381 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 SYNJ2BP-COX16A0A087WUM0 186 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 USP6P35125 1406 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 SPARCL1Q14515 664 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 PYROXD1Q8WU10 500 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 TRAIPQ9BWF2 469 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 COX16Q9P0S2 106 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 TOM1L1O75674 476 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 PLS3P13797 630 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 TFAMQ00059 246 aaKnown RBP18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 TAF1BQ53T94 588 aaPredicted RBP18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 SPOPLQ6IQ16 392 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 GDAP1Q8TB36 358 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 RASGRP4Q8TDF6 673 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 RUBCNQ92622 972 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 KLC2Q9H0B6 622 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 TMEM60Q9H2L4 133 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 RPF1Q9H9Y2 349 aaKnown RBP18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 WDR64B1ANS9 1081 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 CLIC2O15247 247 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 ZSCAN20P17040 1043 aaPredicted RBP18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 TFDP2Q14188 446 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 EAPPQ56P03 285 aaPredicted RBP18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 KCTD1Q719H9 257 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 SMYD4Q8IYR2 804 aaPredicted RBP18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 FAM167AQ96KS9 214 aa18.7■□□□□ 0.58
HMGXB3-206ENST00000613459 PVALEFA0A1B0GWK0 134 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 GRID2IPA4D2P6 1211 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 SPAG7O75391 227 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 CDR2Q01850 454 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 C4orf50Q6ZRC1 276 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 NDUFAF2Q8N183 169 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 MCUQ8NE86 351 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 ANLNQ9NQW6 1124 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 ARL4CP56559 192 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 TEDDM1Q5T9Z0 273 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 TADA2BQ86TJ2 420 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 BCS1LQ9Y276 419 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 DYNLL1P63167 89 aaKnown RBP18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 NLRP10Q86W26 655 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 CRLF3Q8IUI8 442 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 GIMAP8Q8ND71 665 aaPredicted RBP18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 OSBP2Q969R2 916 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 CALN1Q9BXU9 219 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 KDM5CP41229 1560 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 FSCBQ5H9T9 825 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 KSR1Q8IVT5 923 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 ZSWIM5Q9P217 1185 aa18.69■□□□□ 0.58
HMGXB3-206ENST00000613459 ANXA13P27216 316 aa18.68■□□□□ 0.58
HMGXB3-206ENST00000613459 CIITAP33076 1130 aa18.68■□□□□ 0.58
HMGXB3-206ENST00000613459 LGALS16A8MUM7 142 aa18.68■□□□□ 0.58
HMGXB3-206ENST00000613459 TADA3O75528 432 aa18.68■□□□□ 0.58
HMGXB3-206ENST00000613459 TNFAIP2Q03169 654 aa18.68■□□□□ 0.58
HMGXB3-206ENST00000613459 PTPN12Q05209 780 aaKnown RBP18.68■□□□□ 0.58
HMGXB3-206ENST00000613459 NR5A1Q13285 461 aa18.68■□□□□ 0.58
HMGXB3-206ENST00000613459 TTC39CQ8N584 583 aa18.68■□□□□ 0.58
HMGXB3-206ENST00000613459 KLHL38Q2WGJ6 581 aa18.68■□□□□ 0.58
HMGXB3-206ENST00000613459 ERICH1Q86X53 443 aa18.68■□□□□ 0.58
HMGXB3-206ENST00000613459 STRIP2Q9ULQ0 834 aa18.68■□□□□ 0.58
HMGXB3-206ENST00000613459 SLC8A2Q9UPR5 921 aa18.68■□□□□ 0.58
HMGXB3-206ENST00000613459 ADCY1Q08828 1119 aa18.68■□□□□ 0.58
HMGXB3-206ENST00000613459 PCDHB6Q9Y5E3 794 aa18.68■□□□□ 0.58
HMGXB3-206ENST00000613459 MORC2Q9Y6X9 1032 aaPredicted RBP18.68■□□□□ 0.58
HMGXB3-206ENST00000613459 CFAP65Q6ZU64 1925 aaKnown RBP18.68■□□□□ 0.58
HMGXB3-206ENST00000613459 NVLO15381 856 aaKnown RBP18.68■□□□□ 0.58
HMGXB3-206ENST00000613459 PLAAQ9Y263 795 aa18.68■□□□□ 0.58
HMGXB3-206ENST00000613459 MBD5Q9P267 1494 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 COBLO75128 1261 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 CA4P22748 312 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 PAPOLAP51003 745 aaKnown RBP18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 WDR75Q8IWA0 830 aaKnown RBP18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 PIP4K2CQ8TBX8 421 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 PUS7LQ9H0K6 701 aaKnown RBP18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 PPME1Q9Y570 386 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 KRT38O76015 456 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 CALB1P05937 261 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 EEF1B2P24534 225 aaKnown RBP18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 SLCO1A2P46721 670 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 PROSER3Q2NL68 480 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 TMEM179Q6ZVK1 233 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 TRIML2Q8N7C3 387 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 MCPH1Q8NEM0 835 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 CEP19Q96LK0 163 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 ZBTB18Q99592 522 aa18.67■□□□□ 0.58
HMGXB3-206ENST00000613459 COA1Q9GZY4 146 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms