RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 LGR5O75473 907 aa20.71■□□□□ 0.91
SSBP4-212ENST00000601919 YWHABP31946 246 aaKnown RBP20.71■□□□□ 0.91
SSBP4-212ENST00000601919 SLC12A3P55017 1021 aa20.71■□□□□ 0.91
SSBP4-212ENST00000601919 PSMC6P62333 389 aa20.71■□□□□ 0.91
SSBP4-212ENST00000601919 DPYDQ12882 1025 aa20.71■□□□□ 0.91
SSBP4-212ENST00000601919 CNNM4Q6P4Q7 775 aa20.71■□□□□ 0.91
SSBP4-212ENST00000601919 PLPPR4Q7Z2D5 763 aa20.71■□□□□ 0.91
SSBP4-212ENST00000601919 PIGOQ8TEQ8 1089 aa20.71■□□□□ 0.91
SSBP4-212ENST00000601919 STAMQ92783 540 aa20.71■□□□□ 0.91
SSBP4-212ENST00000601919 GLG1Q92896 1179 aa20.71■□□□□ 0.91
SSBP4-212ENST00000601919 FAM167AQ96KS9 214 aa20.71■□□□□ 0.91
SSBP4-212ENST00000601919 GSDMAQ96QA5 445 aa20.71■□□□□ 0.91
SSBP4-212ENST00000601919 SMARCAD1Q9H4L7 1026 aa20.71■□□□□ 0.91
SSBP4-212ENST00000601919 GNEQ9Y223 722 aaKnown RBP20.71■□□□□ 0.91
SSBP4-212ENST00000601919 PCDHA5Q9Y5H7 936 aa20.71■□□□□ 0.91
SSBP4-212ENST00000601919 SEPT4O43236 478 aa20.7■□□□□ 0.9
SSBP4-212ENST00000601919 DUSP11O75319 330 aaKnown RBP20.7■□□□□ 0.9
SSBP4-212ENST00000601919 KRT18P05783 430 aaKnown RBP20.7■□□□□ 0.9
SSBP4-212ENST00000601919 ELNP15502 786 aa20.7■□□□□ 0.9
SSBP4-212ENST00000601919 PRKCEQ02156 737 aa20.7■□□□□ 0.9
SSBP4-212ENST00000601919 CACNB2Q08289 660 aaPredicted RBP20.7■□□□□ 0.9
SSBP4-212ENST00000601919 UGCGQ16739 394 aa20.7■□□□□ 0.9
SSBP4-212ENST00000601919 DGKDQ16760 1214 aa20.7■□□□□ 0.9
SSBP4-212ENST00000601919 XKR3Q5GH77 459 aa20.7■□□□□ 0.9
SSBP4-212ENST00000601919 NT5DC1Q5TFE4 455 aa20.7■□□□□ 0.9
SSBP4-212ENST00000601919 TLK2Q86UE8 772 aa20.7■□□□□ 0.9
SSBP4-212ENST00000601919 GPBP1Q86WP2 473 aa20.7■□□□□ 0.9
SSBP4-212ENST00000601919 TRIML1Q8N9V2 468 aa20.7■□□□□ 0.9
SSBP4-212ENST00000601919 AFG1LQ8WV93 481 aa20.7■□□□□ 0.9
SSBP4-212ENST00000601919 MTRQ99707 1265 aa20.7■□□□□ 0.9
SSBP4-212ENST00000601919 GTPBP4Q9BZE4 634 aaKnown RBP20.7■□□□□ 0.9
SSBP4-212ENST00000601919 TRIM9Q9C026 710 aa20.7■□□□□ 0.9
SSBP4-212ENST00000601919 NRBP2Q9NSY0 501 aa20.7■□□□□ 0.9
SSBP4-212ENST00000601919 WRAP73Q9P2S5 460 aaPredicted RBP20.7■□□□□ 0.9
SSBP4-212ENST00000601919 TUBE1Q9UJT0 475 aa20.7■□□□□ 0.9
SSBP4-212ENST00000601919 DYNC1LI2O43237 492 aaPredicted RBP20.69■□□□□ 0.9
SSBP4-212ENST00000601919 PRR29P0C7W0 189 aa20.69■□□□□ 0.9
SSBP4-212ENST00000601919 PRKAR2AP13861 404 aaKnown RBP20.69■□□□□ 0.9
SSBP4-212ENST00000601919 CNGA1P29973 690 aa20.69■□□□□ 0.9
SSBP4-212ENST00000601919 CPT1AP50416 773 aa20.69■□□□□ 0.9
SSBP4-212ENST00000601919 ASIC1P78348 528 aa20.69■□□□□ 0.9
SSBP4-212ENST00000601919 CUL4BQ13620 913 aa20.69■□□□□ 0.9
SSBP4-212ENST00000601919 TMEM63BQ5T3F8 832 aa20.69■□□□□ 0.9
SSBP4-212ENST00000601919 GJC2Q5T442 439 aaPredicted RBP20.69■□□□□ 0.9
SSBP4-212ENST00000601919 LRSAM1Q6UWE0 723 aa20.69■□□□□ 0.9
SSBP4-212ENST00000601919 TRPV1Q8NER1 839 aa20.69■□□□□ 0.9
SSBP4-212ENST00000601919 SPATA20Q8TB22 786 aa20.69■□□□□ 0.9
SSBP4-212ENST00000601919 BLZF1Q9H2G9 400 aa20.69■□□□□ 0.9
SSBP4-212ENST00000601919 SPC25Q9HBM1 224 aa20.69■□□□□ 0.9
SSBP4-212ENST00000601919 TELO2Q9Y4R8 837 aa20.69■□□□□ 0.9
SSBP4-212ENST00000601919 PVALEFA0A1B0GWK0 134 aa20.68■□□□□ 0.9
SSBP4-212ENST00000601919 MYMKA6NI61 221 aa20.68■□□□□ 0.9
SSBP4-212ENST00000601919 OATP04181 439 aa20.68■□□□□ 0.9
SSBP4-212ENST00000601919 RPN1P04843 607 aaKnown RBP20.68■□□□□ 0.9
SSBP4-212ENST00000601919 RARBP10826 455 aa20.68■□□□□ 0.9
SSBP4-212ENST00000601919 CYP11B2P19099 503 aa20.68■□□□□ 0.9
SSBP4-212ENST00000601919 GRK4P32298 578 aa20.68■□□□□ 0.9
SSBP4-212ENST00000601919 SARSP49591 514 aaKnown RBP20.68■□□□□ 0.9
SSBP4-212ENST00000601919 UTP14CQ5TAP6 766 aaKnown RBP20.68■□□□□ 0.9
SSBP4-212ENST00000601919 DDX12PQ92771 950 aa20.68■□□□□ 0.9
SSBP4-212ENST00000601919 ERCC4Q92889 916 aaPredicted RBP20.68■□□□□ 0.9
SSBP4-212ENST00000601919 ERAP1Q9NZ08 941 aa20.68■□□□□ 0.9
SSBP4-212ENST00000601919 ZNF215Q9UL58 517 aaPredicted RBP20.68■□□□□ 0.9
SSBP4-212ENST00000601919 PPME1Q9Y570 386 aa20.68■□□□□ 0.9
SSBP4-212ENST00000601919 A0A087WWV3 80 aa20.67■□□□□ 0.9
SSBP4-212ENST00000601919 A6NJR5 290 aa20.67■□□□□ 0.9
SSBP4-212ENST00000601919 ZNF862O60290 1169 aa20.67■□□□□ 0.9
SSBP4-212ENST00000601919 LGALS2P05162 132 aa20.67■□□□□ 0.9
SSBP4-212ENST00000601919 MMP3P08254 477 aa20.67■□□□□ 0.9
SSBP4-212ENST00000601919 HOXD8P13378 290 aaPredicted RBP20.67■□□□□ 0.9
SSBP4-212ENST00000601919 RARRES1P49788 294 aa20.67■□□□□ 0.9
SSBP4-212ENST00000601919 TYRO3Q06418 890 aa20.67■□□□□ 0.9
SSBP4-212ENST00000601919 KCNB1Q14721 858 aa20.67■□□□□ 0.9
SSBP4-212ENST00000601919 STX1AQ16623 288 aa20.67■□□□□ 0.9
SSBP4-212ENST00000601919 XKR9Q5GH70 373 aa20.67■□□□□ 0.9
SSBP4-212ENST00000601919 MAP3K21Q5TCX8 1036 aa20.67■□□□□ 0.9
SSBP4-212ENST00000601919 BBXQ8WY36 941 aaPredicted RBP20.67■□□□□ 0.9
SSBP4-212ENST00000601919 PCYT2Q99447 389 aa20.67■□□□□ 0.9
SSBP4-212ENST00000601919 TIPINQ9BVW5 301 aa20.67■□□□□ 0.9
SSBP4-212ENST00000601919 ANO10Q9NW15 660 aa20.67■□□□□ 0.9
SSBP4-212ENST00000601919 SEPT9Q9UHD8 586 aaPredicted RBP20.67■□□□□ 0.9
SSBP4-212ENST00000601919 ARID2Q68CP9 1835 aa20.67■□□□□ 0.9
SSBP4-212ENST00000601919 ADCY6O43306 1168 aa20.66■□□□□ 0.9
SSBP4-212ENST00000601919 KPNA6O60684 536 aa20.66■□□□□ 0.9
SSBP4-212ENST00000601919 RINT1Q6NUQ1 792 aa20.66■□□□□ 0.9
SSBP4-212ENST00000601919 PADI6Q6TGC4 694 aa20.66■□□□□ 0.9
SSBP4-212ENST00000601919 UNC13DQ70J99 1090 aa20.66■□□□□ 0.9
SSBP4-212ENST00000601919 ANO5Q75V66 913 aa20.66■□□□□ 0.9
SSBP4-212ENST00000601919 CCDC65Q8IXS2 484 aa20.66■□□□□ 0.9
SSBP4-212ENST00000601919 CEP170P1Q96L14 293 aa20.66■□□□□ 0.9
SSBP4-212ENST00000601919 NIFKQ9BYG3 293 aaKnown RBP20.66■□□□□ 0.9
SSBP4-212ENST00000601919 TSPY26PQ9H489 355 aa20.66■□□□□ 0.9
SSBP4-212ENST00000601919 EXOC1Q9NV70 894 aa20.66■□□□□ 0.9
SSBP4-212ENST00000601919 ZBTB39O15060 712 aa20.65■□□□□ 0.9
SSBP4-212ENST00000601919 ZEB2O60315 1214 aa20.65■□□□□ 0.9
SSBP4-212ENST00000601919 MSCO60682 206 aa20.65■□□□□ 0.9
SSBP4-212ENST00000601919 STBD1O95210 358 aa20.65■□□□□ 0.9
SSBP4-212ENST00000601919 CAVIN2O95810 425 aa20.65■□□□□ 0.9
SSBP4-212ENST00000601919 CASP1P29466 404 aa20.65■□□□□ 0.9
SSBP4-212ENST00000601919 NLRP12P59046 1061 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms