RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 ANKRD65E5RJM6 399 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 XRCC5P13010 732 aaKnown RBP22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 RBM5P52756 815 aaKnown RBP eCLIP22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 KCNA1Q09470 495 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 TRADDQ15628 312 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 PTPROQ16827 1216 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 TTMPQ5BVD1 217 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 ZIM3Q96PE6 472 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 RUSC1Q9BVN2 902 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 TSPYL1Q9H0U9 437 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 BHMT2Q9H2M3 363 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 PI4KBQ9UBF8 816 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 NRXN2Q9P2S2 1712 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 GOLGA8KD6RF30 607 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 MSH4O15457 936 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 HSF2BPO75031 334 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 CASP4P49662 377 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 DNAJC21Q5F1R6 531 aaKnown RBP22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 TCERG1LQ5VWI1 586 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 ALS2CLQ60I27 953 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 FBXO11Q86XK2 927 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 RUFY1Q96T51 708 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 PLCB1Q9NQ66 1216 aa22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 AJAP1Q9UKB5 411 aaPredicted RBP22.17■■□□□ 1.14
SHKBP1-225ENST00000600733 TBX3O15119 743 aa22.16■■□□□ 1.14
SHKBP1-225ENST00000600733 OPA1O60313 960 aa22.16■■□□□ 1.14
SHKBP1-225ENST00000600733 SREBF1P36956 1147 aa22.16■■□□□ 1.14
SHKBP1-225ENST00000600733 IRAK1P51617 712 aa22.16■■□□□ 1.14
SHKBP1-225ENST00000600733 PPFIA1Q13136 1202 aa22.16■■□□□ 1.14
SHKBP1-225ENST00000600733 RASSF4Q9H2L5 321 aa22.16■■□□□ 1.14
SHKBP1-225ENST00000600733 ASTN1O14525 1302 aa22.16■■□□□ 1.14
SHKBP1-225ENST00000600733 SMCHD1A6NHR9 2005 aa22.16■■□□□ 1.14
SHKBP1-225ENST00000600733 NDUFB10O96000 172 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 KRT14P02533 472 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 TTC19Q6DKK2 380 aaPredicted RBP22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 SLC30A10Q6XR72 485 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 IKZF4Q9H2S9 585 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 RGL1Q9NZL6 768 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 VAV3Q9UKW4 847 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 SFI1A8K8P3 1242 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 PDXKO00764 312 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 KCNK3O14649 394 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 OPLAHO14841 1288 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 CLIC2O15247 247 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 CALUO43852 315 aaPredicted RBP22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 GCNT3O95395 438 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 NR3C1P04150 777 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 POLD1P28340 1107 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 GUCY2FP51841 1108 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 SLC27A3Q5K4L6 730 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 USP38Q8NB14 1042 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 CASKIN2Q8WXE0 1202 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 CCDC43Q96MW1 224 aaKnown RBP22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 NAGPAQ9UK23 515 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 KIF13BQ9NQT8 1826 aa22.15■■□□□ 1.14
SHKBP1-225ENST00000600733 EML1O00423 815 aa22.14■■□□□ 1.14
SHKBP1-225ENST00000600733 NPR1P16066 1061 aa22.14■■□□□ 1.14
SHKBP1-225ENST00000600733 PAK2Q13177 524 aa22.14■■□□□ 1.14
SHKBP1-225ENST00000600733 NNTQ13423 1086 aa22.14■■□□□ 1.14
SHKBP1-225ENST00000600733 EPHA7Q15375 998 aa22.14■■□□□ 1.14
SHKBP1-225ENST00000600733 KLHL7Q8IXQ5 586 aa22.14■■□□□ 1.14
SHKBP1-225ENST00000600733 CAPS2Q9BXY5 557 aa22.14■■□□□ 1.14
SHKBP1-225ENST00000600733 RABEP2Q9H5N1 569 aa22.14■■□□□ 1.14
SHKBP1-225ENST00000600733 RAD51CO43502 376 aa22.14■■□□□ 1.13
SHKBP1-225ENST00000600733 EPB41P11171 864 aaKnown RBP22.14■■□□□ 1.13
SHKBP1-225ENST00000600733 NOP2P46087 812 aaKnown RBP22.14■■□□□ 1.13
SHKBP1-225ENST00000600733 RPS6KA1Q15418 735 aa22.14■■□□□ 1.13
SHKBP1-225ENST00000600733 SYDE2Q5VT97 1194 aa22.14■■□□□ 1.13
SHKBP1-225ENST00000600733 TATDN1Q6P1N9 297 aa22.14■■□□□ 1.13
SHKBP1-225ENST00000600733 GJB7Q6PEY0 223 aa22.14■■□□□ 1.13
SHKBP1-225ENST00000600733 FAM20AQ96MK3 541 aa22.14■■□□□ 1.13
SHKBP1-225ENST00000600733 TYW1Q9NV66 732 aaKnown RBP22.14■■□□□ 1.13
SHKBP1-225ENST00000600733 JAG1P78504 1218 aa22.13■■□□□ 1.13
SHKBP1-225ENST00000600733 KCTD16Q68DU8 428 aa22.13■■□□□ 1.13
SHKBP1-225ENST00000600733 ALKBH5Q6P6C2 394 aaKnown RBP22.13■■□□□ 1.13
SHKBP1-225ENST00000600733 TMEM179Q6ZVK1 233 aa22.13■■□□□ 1.13
SHKBP1-225ENST00000600733 SH2D3CQ8N5H7 860 aa22.13■■□□□ 1.13
SHKBP1-225ENST00000600733 TAF4BQ92750 862 aa22.13■■□□□ 1.13
SHKBP1-225ENST00000600733 SLC35C1Q96A29 364 aa22.13■■□□□ 1.13
SHKBP1-225ENST00000600733 EIF2AK1Q9BQI3 630 aaKnown RBP22.13■■□□□ 1.13
SHKBP1-225ENST00000600733 SIX2Q9NPC8 291 aa22.13■■□□□ 1.13
SHKBP1-225ENST00000600733 PCDHB13Q9Y5F0 798 aa22.13■■□□□ 1.13
SHKBP1-225ENST00000600733 BTNL10A8MVZ5 291 aa22.13■■□□□ 1.13
SHKBP1-225ENST00000600733 TBCAO75347 108 aaKnown RBP22.13■■□□□ 1.13
SHKBP1-225ENST00000600733 MEX3CQ5U5Q3 659 aaKnown RBP22.13■■□□□ 1.13
SHKBP1-225ENST00000600733 PIGOQ8TEQ8 1089 aa22.13■■□□□ 1.13
SHKBP1-225ENST00000600733 GCNT4Q9P109 453 aa22.13■■□□□ 1.13
SHKBP1-225ENST00000600733 RABGAP1Q9Y3P9 1069 aa22.13■■□□□ 1.13
SHKBP1-225ENST00000600733 GRIN2DO15399 1336 aa22.12■■□□□ 1.13
SHKBP1-225ENST00000600733 ONECUT3O60422 494 aaPredicted RBP22.12■■□□□ 1.13
SHKBP1-225ENST00000600733 KIF4AO95239 1232 aa22.12■■□□□ 1.13
SHKBP1-225ENST00000600733 ABCB5Q2M3G0 1257 aa22.12■■□□□ 1.13
SHKBP1-225ENST00000600733 C10orf76Q5T2E6 689 aa22.12■■□□□ 1.13
SHKBP1-225ENST00000600733 LRRC57Q8N9N7 239 aa22.12■■□□□ 1.13
SHKBP1-225ENST00000600733 IDI2Q9BXS1 227 aa22.12■■□□□ 1.13
SHKBP1-225ENST00000600733 BZW2Q9Y6E2 419 aaKnown RBP22.12■■□□□ 1.13
SHKBP1-225ENST00000600733 ZNF233A6NK53 670 aa22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 TRIM37O94972 964 aa22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 FOSP01100 380 aaPredicted RBP22.11■■□□□ 1.13
SHKBP1-225ENST00000600733 ZNF76P36508 570 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms