RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 MAML3Q96JK9 1138 aa6.67□□□□□ -1.34
DNMT1-220ENST00000589351 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.67□□□□□ -1.348e-9■■■□□ 15.7
DNMT1-220ENST00000589351 XPNPEP3Q9NQH7 507 aa6.67□□□□□ -1.34
DNMT1-220ENST00000589351 TMEM39AQ9NV64 488 aa6.67□□□□□ -1.34
DNMT1-220ENST00000589351 ABI2Q9NYB9 513 aaPredicted RBP6.67□□□□□ -1.34
DNMT1-220ENST00000589351 BCCIPQ9P287 314 aaKnown RBP eCLIP6.67□□□□□ -1.34
DNMT1-220ENST00000589351 CNPY2Q9Y2B0 182 aa6.67□□□□□ -1.34
DNMT1-220ENST00000589351 DIS3Q9Y2L1 958 aaKnown RBP6.67□□□□□ -1.34
DNMT1-220ENST00000589351 CTDP1Q9Y5B0 961 aaPredicted RBP6.67□□□□□ -1.34
DNMT1-220ENST00000589351 FAM95CA0A1B0GW59 222 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 WDR46O15213 610 aaKnown RBP6.66□□□□□ -1.34
DNMT1-220ENST00000589351 PAPLNO95428 1278 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 CLTBP09497 229 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 IFIT2P09913 472 aaKnown RBP6.66□□□□□ -1.34
DNMT1-220ENST00000589351 AKR1A1P14550 325 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 FOSL2P15408 326 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 ADMP35318 185 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 TLE2Q04725 743 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 ICA1Q05084 483 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 SNX17Q15036 470 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 TRIM60Q495X7 471 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 PRAMEF19Q5SWL8 479 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 ZSCAN25Q6NSZ9 544 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 SPOCD1Q6ZMY3 1216 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 C12orf50Q8NA57 414 aaPredicted RBP6.66□□□□□ -1.34
DNMT1-220ENST00000589351 TRPV1Q8NER1 839 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 FAM200AQ8TCP9 573 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 RNPC3Q96LT9 517 aaKnown RBP6.66□□□□□ -1.34
DNMT1-220ENST00000589351 PRIMPOLQ96LW4 560 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 MMP19Q99542 508 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 RIOK1Q9BRS2 568 aaKnown RBP6.66□□□□□ -1.34
DNMT1-220ENST00000589351 TINF2Q9BSI4 451 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 CHMP4BQ9H444 224 aaKnown RBP6.66□□□□□ -1.34
DNMT1-220ENST00000589351 VCPKMTQ9H867 229 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 PRDM16Q9HAZ2 1276 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 SPC25Q9HBM1 224 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 PDLIM7Q9NR12 457 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 ATP8A2Q9NTI2 1148 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 FNDC3AQ9Y2H6 1198 aaKnown RBP6.66□□□□□ -1.34
DNMT1-220ENST00000589351 TMX2Q9Y320 296 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 SIPA1L1O43166 1804 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 CDK5RAP2Q96SN8 1893 aa6.66□□□□□ -1.34
DNMT1-220ENST00000589351 A0A0C4DFX4 3053 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 A0A1W2PRG0 241 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 TNFRSF10BO14763 440 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 HMMRO75330 724 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 TIAF1O95411 115 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 IGHA2P01877 340 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 ACPPP15309 386 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 TCF3P15923 654 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 GUCY1A2P33402 732 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 STAT3P40763 770 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 FPGSQ05932 587 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 GABPAQ06546 454 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 C9orf50Q5SZB4 431 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 PAOXQ6QHF9 649 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 RIOX2Q8IUF8 465 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 MSL3Q8N5Y2 521 aaKnown RBP6.65□□□□□ -1.34
DNMT1-220ENST00000589351 PCSK9Q8NBP7 692 aaKnown RBP6.65□□□□□ -1.34
DNMT1-220ENST00000589351 SLC44A5Q8NCS7 719 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 AGBL5Q8NDL9 886 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.65□□□□□ -1.34
DNMT1-220ENST00000589351 FBLIM1Q8WUP2 373 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 MYLIPQ8WY64 445 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 DDX11Q96FC9 970 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 TOX2Q96NM4 488 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 TMPRSS13Q9BYE2 586 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 ANTXR1Q9H6X2 564 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 KANSL2Q9H9L4 492 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 DCP1AQ9NPI6 582 aaPredicted RBP6.65□□□□□ -1.34
DNMT1-220ENST00000589351 STARD7Q9NQZ5 370 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 FAM13BQ9NYF5 915 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 FAM184BQ9ULE4 1060 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 TNNQ9UQP3 1299 aa6.65□□□□□ -1.34
DNMT1-220ENST00000589351 GNEQ9Y223 722 aaKnown RBP6.65□□□□□ -1.34
DNMT1-220ENST00000589351 MROH7Q68CQ1 1323 aa6.65□□□□□ -1.35
DNMT1-220ENST00000589351 ZNF532Q9HCE3 1301 aa6.65□□□□□ -1.35
DNMT1-220ENST00000589351 FRMPD3Q5JV73 1810 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 TRIM43BA6NCK2 446 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 DBX1A6NMT0 343 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 GOLIM4O00461 696 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 KIAA0355O15063 1070 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 TLR3O15455 904 aaKnown RBP6.64□□□□□ -1.35
DNMT1-220ENST00000589351 PQBP1O60828 265 aaKnown RBP6.64□□□□□ -1.35
DNMT1-220ENST00000589351 ZBED4O75132 1171 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 PDE6AP16499 860 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 ZNF16P17020 682 aaPredicted RBP6.64□□□□□ -1.35
DNMT1-220ENST00000589351 RFX1P22670 979 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 CDK8P49336 464 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 FAM47AQ5JRC9 791 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 CDPF1Q6NVV7 123 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 C16orf46Q6P387 395 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 CCDC129Q6ZRS4 1044 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 RPAP2Q8IXW5 612 aaPredicted RBP6.64□□□□□ -1.35
DNMT1-220ENST00000589351 SPICE1Q8N0Z3 855 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 TMEM199Q8N511 208 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 SMG8Q8ND04 991 aaKnown RBP6.64□□□□□ -1.35
DNMT1-220ENST00000589351 GPR152Q8TDT2 470 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 SDR42E1Q8WUS8 393 aa6.64□□□□□ -1.35
DNMT1-220ENST00000589351 TRIM43Q96BQ3 446 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms