RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 AIFM3Q96NN9 605 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 SLC28A3Q9HAS3 691 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 ORC3Q9UBD5 711 aaPredicted RBP11.21□□□□□ -0.61
SKA2-208ENST00000583927 TCEAL9Q9UHQ7 104 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 YBX2Q9Y2T7 364 aaKnown RBP11.21□□□□□ -0.61
SKA2-208ENST00000583927 PCDHA2Q9Y5H9 948 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 PCDHA10Q9Y5I2 948 aa11.21□□□□□ -0.61
SKA2-208ENST00000583927 PRRC2BQ5JSZ5 2229 aaKnown RBP11.21□□□□□ -0.62
SKA2-208ENST00000583927 IGSF9BQ9UPX0 1349 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 KDM3AQ9Y4C1 1321 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 SMIM35A0A1B0GVV1 85 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 WDR64B1ANS9 1081 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 KIF28PB7ZC32 967 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 PSMD10O75832 226 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 GJB5O95377 273 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 PSAPP07602 524 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 GCFC2P16383 781 aaKnown RBP11.2□□□□□ -0.62
SKA2-208ENST00000583927 SFNP31947 248 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 GRIN2CQ14957 1233 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 ZNF484Q5JVG2 852 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 USP38Q8NB14 1042 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 DBF4BQ8NFT6 615 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 ETNPPLQ8TBG4 499 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 BBXQ8WY36 941 aaPredicted RBP11.2□□□□□ -0.62
SKA2-208ENST00000583927 SEPT8Q92599 483 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 FAM161BQ96MY7 647 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 KIF2CQ99661 725 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 NAP1L4Q99733 375 aaKnown RBP11.2□□□□□ -0.62
SKA2-208ENST00000583927 ZNF302Q9NR11 478 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 LIMCH1Q9UPQ0 1083 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 TRPC6Q9Y210 931 aa11.2□□□□□ -0.62
SKA2-208ENST00000583927 CUL9Q8IWT3 2517 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 NCOR1O75376 2440 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 FNDC1Q4ZHG4 1894 aaPredicted RBP11.19□□□□□ -0.62
SKA2-208ENST00000583927 ZBTB42B2RXF5 422 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 BACH1O14867 736 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 LARGE1O95461 756 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 CHRNA1P02708 482 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 POU3F3P20264 500 aaPredicted RBP11.19□□□□□ -0.62
SKA2-208ENST00000583927 ATP4AP20648 1035 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 JAK3P52333 1124 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 TCTN1Q2MV58 587 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 IER5Q5VY09 327 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 SWSAP1Q6NVH7 229 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 PDXDC2PQ6P474 469 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 RUFY4Q6ZNE9 571 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 ZNF710Q8N1W2 664 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 FAM167AQ96KS9 214 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 RAD9AQ99638 391 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 LLPHQ9BRT6 129 aaKnown RBP11.19□□□□□ -0.62
SKA2-208ENST00000583927 NKX2-4Q9H2Z4 354 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 KCNJ14Q9UNX9 436 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 CEP131Q9UPN4 1083 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 COL4A4P53420 1690 aaPredicted RBP11.19□□□□□ -0.62
SKA2-208ENST00000583927 MUC3AQ02505 3323 aa11.19□□□□□ -0.62
SKA2-208ENST00000583927 BRWD1Q9NSI6 2320 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 CCDC194A0A1B0GVG4 234 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 DDX39AO00148 427 aaKnown RBP11.18□□□□□ -0.62
SKA2-208ENST00000583927 TBX3O15119 743 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 GAS7O60861 476 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 CTSHP09668 335 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 FOSL2P15408 326 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 RABGGTBP53611 331 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 DEFB103AP81534 67 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 MRPS6P82932 125 aaKnown RBP11.18□□□□□ -0.62
SKA2-208ENST00000583927 HTRA4P83105 476 aaPredicted RBP11.18□□□□□ -0.62
SKA2-208ENST00000583927 FBXO47Q5MNV8 452 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 LRCH2Q5VUJ6 765 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 PPP2R2DQ66LE6 453 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 MTHFD1LQ6UB35 978 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 TSHZ1Q6ZSZ6 1077 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 NEK8Q86SG6 692 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 NECAB1Q8N987 351 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 DNAJB3Q8WWF6 145 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 MYLIPQ8WY64 445 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 TNFRSF25Q93038 417 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 TOP1MTQ969P6 601 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 ZSCAN31Q96LW9 406 aaPredicted RBP11.18□□□□□ -0.62
SKA2-208ENST00000583927 FAM20AQ96MK3 541 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 GAS2L1Q99501 681 aaPredicted RBP11.18□□□□□ -0.62
SKA2-208ENST00000583927 TEKT3Q9BXF9 490 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 IFIH1Q9BYX4 1025 aaKnown RBP11.18□□□□□ -0.62
SKA2-208ENST00000583927 KCNMB3Q9NPA1 279 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 SH2B1Q9NRF2 756 aaPredicted RBP11.18□□□□□ -0.62
SKA2-208ENST00000583927 DISC1Q9NRI5 854 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 KIAA1671Q9BY89 1806 aa11.18□□□□□ -0.62
SKA2-208ENST00000583927 MAGEB2O15479 319 aa11.17□□□□□ -0.62
SKA2-208ENST00000583927 TLL1O43897 1013 aa11.17□□□□□ -0.62
SKA2-208ENST00000583927 TDP2O95551 362 aa11.17□□□□□ -0.62
SKA2-208ENST00000583927 MMP1P03956 469 aa11.17□□□□□ -0.62
SKA2-208ENST00000583927 AMHP03971 560 aa11.17□□□□□ -0.62
SKA2-208ENST00000583927 CA3P07451 260 aa11.17□□□□□ -0.62
SKA2-208ENST00000583927 KLRC1P26715 233 aa11.17□□□□□ -0.62
SKA2-208ENST00000583927 KRT2P35908 639 aa11.17□□□□□ -0.62
SKA2-208ENST00000583927 TAP1Q03518 808 aa11.17□□□□□ -0.62
SKA2-208ENST00000583927 ST3GAL1Q11201 340 aa11.17□□□□□ -0.62
SKA2-208ENST00000583927 PPP2R5CQ13362 524 aa11.17□□□□□ -0.62
SKA2-208ENST00000583927 LPIN1Q14693 890 aa11.17□□□□□ -0.62
SKA2-208ENST00000583927 INF2Q27J81 1249 aa11.17□□□□□ -0.62
SKA2-208ENST00000583927 FTHL17Q9BXU8 183 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms