RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 PBKQ96KB5 322 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 SH3GLB2Q9NR46 395 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 RBM12Q9NTZ6 932 aaKnown RBP13.03□□□□□ -0.32
ERBB2-206ENST00000578373 PI4KBQ9UBF8 816 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 NXF1Q9UBU9 619 aaKnown RBP13.03□□□□□ -0.32
ERBB2-206ENST00000578373 MAD1L1Q9Y6D9 718 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 POLGP54098 1239 aaPredicted RBP13.03□□□□□ -0.32
ERBB2-206ENST00000578373 IWS1Q96ST2 819 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 RNF14Q9UBS8 474 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 MAGED2Q9UNF1 606 aaPredicted RBP13.03□□□□□ -0.32
ERBB2-206ENST00000578373 HPSEQ9Y251 543 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 COL15A1P39059 1388 aa13.02□□□□□ -0.32
ERBB2-206ENST00000578373 SGK1O00141 431 aa13.02□□□□□ -0.32
ERBB2-206ENST00000578373 ECEL1O95672 775 aa13.02□□□□□ -0.32
ERBB2-206ENST00000578373 PIK3CAP42336 1068 aa13.02□□□□□ -0.32
ERBB2-206ENST00000578373 CARSP49589 748 aaKnown RBP13.02□□□□□ -0.32
ERBB2-206ENST00000578373 STAT2P52630 851 aa13.02□□□□□ -0.32
ERBB2-206ENST00000578373 YWHAGP61981 247 aaKnown RBP eCLIP13.02□□□□□ -0.32
ERBB2-206ENST00000578373 PPP2R5EQ16537 467 aa13.02□□□□□ -0.32
ERBB2-206ENST00000578373 ZNF449Q6P9G9 518 aa13.02□□□□□ -0.32
ERBB2-206ENST00000578373 SREK1Q8WXA9 508 aaKnown RBP13.02□□□□□ -0.32
ERBB2-206ENST00000578373 ZNF668Q96K58 619 aaPredicted RBP13.02□□□□□ -0.32
ERBB2-206ENST00000578373 LBHD1Q9BQE6 289 aaPredicted RBP13.02□□□□□ -0.32
ERBB2-206ENST00000578373 TTC7AQ9ULT0 858 aaPredicted RBP13.02□□□□□ -0.32
ERBB2-206ENST00000578373 STK24Q9Y6E0 443 aa13.02□□□□□ -0.32
ERBB2-206ENST00000578373 PIK3C2BO00750 1634 aa13.02□□□□□ -0.32
ERBB2-206ENST00000578373 PTPRUQ92729 1446 aa13.02□□□□□ -0.32
ERBB2-206ENST00000578373 NMT1P30419 496 aaKnown RBP13.02□□□□□ -0.33
ERBB2-206ENST00000578373 SEC24CP53992 1094 aa13.02□□□□□ -0.33
ERBB2-206ENST00000578373 NTRK3Q16288 839 aa13.02□□□□□ -0.33
ERBB2-206ENST00000578373 ANAPC5Q9UJX4 755 aa13.02□□□□□ -0.33
ERBB2-206ENST00000578373 SCAF8Q9UPN6 1271 aaKnown RBP13.02□□□□□ -0.33
ERBB2-206ENST00000578373 PVALEFA0A1B0GWK0 134 aa13.02□□□□□ -0.33
ERBB2-206ENST00000578373 SUN1O94901 812 aa13.02□□□□□ -0.33
ERBB2-206ENST00000578373 SAT1P21673 171 aa13.02□□□□□ -0.33
ERBB2-206ENST00000578373 KCNJ6P48051 423 aa13.02□□□□□ -0.33
ERBB2-206ENST00000578373 MFAP3P55082 362 aa13.02□□□□□ -0.33
ERBB2-206ENST00000578373 DRAP1Q14919 205 aaPredicted RBP13.02□□□□□ -0.33
ERBB2-206ENST00000578373 C10orf76Q5T2E6 689 aa13.02□□□□□ -0.33
ERBB2-206ENST00000578373 FBXW10Q5XX13 1052 aa13.02□□□□□ -0.33
ERBB2-206ENST00000578373 ANKRD35Q8N283 1001 aa13.02□□□□□ -0.33
ERBB2-206ENST00000578373 FUT8Q9BYC5 575 aa13.02□□□□□ -0.33
ERBB2-206ENST00000578373 KMT5AQ9NQR1 393 aa13.02□□□□□ -0.33
ERBB2-206ENST00000578373 ZC3H13Q5T200 1668 aaKnown RBP13.02□□□□□ -0.33
ERBB2-206ENST00000578373 NRXN1Q9ULB1 1477 aa13.02□□□□□ -0.33
ERBB2-206ENST00000578373 A0A1W2PQC6 194 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 ORC4O43929 436 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 SRGNP10124 158 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 SLC9A1P19634 815 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 MTERF2Q49AM1 385 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 BEND6Q5SZJ8 279 aaPredicted RBP13.01□□□□□ -0.33
ERBB2-206ENST00000578373 RNF10Q8N5U6 811 aaKnown RBP13.01□□□□□ -0.33
ERBB2-206ENST00000578373 FBXL5Q9UKA1 691 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 ARHGAP42A6NI28 874 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 RPS6KA4O75676 772 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 H2AFXP16104 143 aaPredicted RBP13.01□□□□□ -0.33
ERBB2-206ENST00000578373 EZH2Q15910 746 aaKnown RBP13.01□□□□□ -0.33
ERBB2-206ENST00000578373 GEN1Q17RS7 908 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 ADGRA1Q86SQ6 560 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 LMNTD2Q8IXW0 634 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 NIM1KQ8IY84 436 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 ZNF34Q8IZ26 560 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.01□□□□□ -0.33
ERBB2-206ENST00000578373 LRRC8CQ8TDW0 803 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 RNF34Q969K3 372 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 DYDC2Q96IM9 177 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 ODF2LQ9ULJ1 636 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 F5H6K3 240 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 CIB2O75838 187 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 MMEP08473 750 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 GCKP35557 465 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 PDE6BP35913 854 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 KLRC3Q07444 240 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 KCTD19Q17RG1 926 aaPredicted RBP13.01□□□□□ -0.33
ERBB2-206ENST00000578373 SCARA5Q6ZMJ2 495 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 NARFQ9UHQ1 456 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 GBP1P32455 592 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 COPB2P35606 906 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 ERFP50548 548 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 RCN2Q14257 317 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 KNOP1Q1ED39 458 aaKnown RBP13.01□□□□□ -0.33
ERBB2-206ENST00000578373 CCNI2Q6ZMN8 369 aaPredicted RBP13.01□□□□□ -0.33
ERBB2-206ENST00000578373 SCYL3Q8IZE3 742 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 NEDD1Q8NHV4 660 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 PLA2G12BQ9BX93 195 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 CCSER1Q9C0I3 900 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 CNTNAP5Q8WYK1 1306 aa13.01□□□□□ -0.33
ERBB2-206ENST00000578373 DLC1Q96QB1 1528 aa13□□□□□ -0.33
ERBB2-206ENST00000578373 LRRD1A4D1F6 860 aa13□□□□□ -0.33
ERBB2-206ENST00000578373 GAP43P17677 238 aa13□□□□□ -0.33
ERBB2-206ENST00000578373 TFAMQ00059 246 aaKnown RBP13□□□□□ -0.33
ERBB2-206ENST00000578373 CC2D2BQ6DHV5 1058 aa13□□□□□ -0.33
ERBB2-206ENST00000578373 PDXDC1Q6P996 788 aa13□□□□□ -0.33
ERBB2-206ENST00000578373 TMED8Q6PL24 325 aaPredicted RBP13□□□□□ -0.33
ERBB2-206ENST00000578373 SRLQ86TD4 932 aa13□□□□□ -0.33
ERBB2-206ENST00000578373 SUPT20HQ8NEM7 779 aa13□□□□□ -0.33
ERBB2-206ENST00000578373 TRIM6Q9C030 488 aaPredicted RBP13□□□□□ -0.33
ERBB2-206ENST00000578373 H3BQF6 201 aa13□□□□□ -0.33
ERBB2-206ENST00000578373 I3L4J1 428 aa13□□□□□ -0.33
ERBB2-206ENST00000578373 SART1O43290 800 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms