RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 LGALS16A8MUM7 142 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 NDUFA10O95299 355 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 AMPD3Q01432 767 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 GPS2Q13227 327 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 TLR1Q15399 786 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 SLC35G1Q2M3R5 365 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 PLEKHG6Q3KR16 790 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 TRIM67Q6ZTA4 783 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 C4orf32Q8N8J7 132 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 CNOT6LQ96LI5 555 aaKnown RBP5.94□□□□□ -1.46
VAPA-203ENST00000577539 DEF6Q9H4E7 631 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 MMRN2Q9H8L6 949 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 LRWD1Q9UFC0 647 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 COL4A1P02462 1669 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 DOT1LQ8TEK3 1739 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 CCDC66A2RUB6 948 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 PHACTR2O75167 634 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 SASH3O75995 380 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 TM4SF1P30408 202 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 TNNT3P45378 269 aaPredicted RBP5.94□□□□□ -1.46
VAPA-203ENST00000577539 KLK7P49862 253 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 CYP27A1Q02318 531 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 STK4Q13043 487 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 P2RX5Q93086 422 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 CCDC74AQ96AQ1 378 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 CAPN10Q9HC96 672 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 FAM207AQ9NSI2 230 aaPredicted RBP5.94□□□□□ -1.46
VAPA-203ENST00000577539 VTI1BQ9UEU0 232 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 COL14A1Q05707 1796 aaKnown RBP5.94□□□□□ -1.46
VAPA-203ENST00000577539 ANKRD36CQ5JPF3 1778 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 ABCA3Q99758 1704 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 CICQ96RK0 1608 aaPredicted RBP5.94□□□□□ -1.46
VAPA-203ENST00000577539 BCL9LQ86UU0 1499 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 ZRANB2O95218 330 aaKnown RBP eCLIP5.94□□□□□ -1.46
VAPA-203ENST00000577539 TBC1D8O95759 1140 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 TIMP2P16035 220 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 EEF1GP26641 437 aaKnown RBP5.94□□□□□ -1.46
VAPA-203ENST00000577539 CYLC1P35663 651 aaPredicted RBP5.94□□□□□ -1.46
VAPA-203ENST00000577539 DNM2P50570 870 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 PTPN5P54829 565 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 NAP1L1P55209 391 aaKnown RBP5.94□□□□□ -1.46
VAPA-203ENST00000577539 TMEM266Q2M3C6 531 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 GALNT17Q6IS24 598 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 SV2BQ7L1I2 683 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 RSRC2Q7L4I2 434 aaKnown RBP5.94□□□□□ -1.46
VAPA-203ENST00000577539 NEK11Q8NG66 645 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 JAKMIP2Q96AA8 810 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 LZTS2Q9BRK4 669 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 CCSER1Q9C0I3 900 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 JADE2Q9NQC1 790 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 AGPAT5Q9NUQ2 364 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 CNTN3Q9P232 1028 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 HDAC6Q9UBN7 1215 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 GABBR1Q9UBS5 961 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 ADAMTS1Q9UHI8 967 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 MYO6Q9UM54 1294 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 LRP5O75197 1615 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 DUOX1Q9NRD9 1551 aa5.94□□□□□ -1.46
VAPA-203ENST00000577539 ITIH6Q6UXX5 1313 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 BICDL2A1A5D9 508 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 KLF4O43474 513 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 SRGAP2O75044 1071 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 CCNE1P24864 410 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 DHX9Q08211 1270 aaKnown RBP5.93□□□□□ -1.46
VAPA-203ENST00000577539 UBAP2LQ14157 1087 aaKnown RBP5.93□□□□□ -1.46
VAPA-203ENST00000577539 LRRC41Q15345 812 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 SPA17Q15506 151 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 CALCRLQ16602 461 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 HSP90B2PQ58FF3 399 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 MEX3CQ5U5Q3 659 aaKnown RBP5.93□□□□□ -1.46
VAPA-203ENST00000577539 ANKRD40Q6AI12 368 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 DPP8Q6V1X1 898 aaPredicted RBP5.93□□□□□ -1.46
VAPA-203ENST00000577539 IRF2BP1Q8IU81 584 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 FAM114A1Q8IWE2 563 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 SNX29Q8TEQ0 813 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 CCDC42Q96M95 316 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 GDAP1L1Q96MZ0 367 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 TRIM9Q9C026 710 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 SUGCTQ9HAC7 445 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 USP21Q9UK80 565 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 CCDC151A5D8V7 595 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 LRRC10BA6NIK2 292 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 UBAP1LF5GYI3 381 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 KRT86O43790 486 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 TOM1O60784 492 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 TDP2O95551 362 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 SLC16A2P36021 539 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 LMAN1P49257 510 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 DNA2P51530 1060 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 KRT83P78385 493 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 ST5P78524 1137 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 NEDD1Q8NHV4 660 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 DHTKD1Q96HY7 919 aaPredicted RBP5.93□□□□□ -1.46
VAPA-203ENST00000577539 RHOVQ96L33 236 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 AGBL1Q96MI9 1066 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 PLCD4Q9BRC7 762 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 RTFDC1Q9BY42 306 aaPredicted RBP5.93□□□□□ -1.46
VAPA-203ENST00000577539 ABCB6Q9NP58 842 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 TBC1D7Q9P0N9 293 aa5.93□□□□□ -1.46
VAPA-203ENST00000577539 CHD4Q14839 1912 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms