RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 SYPP08247 313 aa7.09□□□□□ -1.27
SF3B3-214ENST00000572365 HSP90B1P14625 803 aaKnown RBP7.09□□□□□ -1.27
SF3B3-214ENST00000572365 IFNGR1P15260 489 aa7.09□□□□□ -1.27
SF3B3-214ENST00000572365 ZEB1P37275 1124 aaPredicted RBP7.09□□□□□ -1.27
SF3B3-214ENST00000572365 KIF23Q02241 960 aaPredicted RBP7.09□□□□□ -1.27
SF3B3-214ENST00000572365 C21orf62-AS1Q17RA5 79 aa7.09□□□□□ -1.27
SF3B3-214ENST00000572365 PRSS53Q2L4Q9 553 aa7.09□□□□□ -1.27
SF3B3-214ENST00000572365 RTP2Q5QGT7 225 aa7.09□□□□□ -1.27
SF3B3-214ENST00000572365 ACBD5Q5T8D3 534 aaPredicted RBP7.09□□□□□ -1.27
SF3B3-214ENST00000572365 EEF1DP3Q658K8 133 aa7.09□□□□□ -1.27
SF3B3-214ENST00000572365 RNF111Q6ZNA4 994 aa7.09□□□□□ -1.27
SF3B3-214ENST00000572365 FRS2Q8WU20 508 aa7.09□□□□□ -1.27
SF3B3-214ENST00000572365 PTPRN2Q92932 1015 aa7.09□□□□□ -1.27
SF3B3-214ENST00000572365 BRIP1Q9BX63 1249 aa7.09□□□□□ -1.27
SF3B3-214ENST00000572365 CARD11Q9BXL7 1154 aa7.09□□□□□ -1.27
SF3B3-214ENST00000572365 INTS7Q9NVH2 962 aaKnown RBP7.09□□□□□ -1.27
SF3B3-214ENST00000572365 RNF186Q9NXI6 227 aa7.09□□□□□ -1.27
SF3B3-214ENST00000572365 DUSP13Q9UII6 198 aa7.09□□□□□ -1.27
SF3B3-214ENST00000572365 THSD7BQ9C0I4 1608 aa7.09□□□□□ -1.28
SF3B3-214ENST00000572365 RTL1A6NKG5 1358 aa7.08□□□□□ -1.28
SF3B3-214ENST00000572365 FLT4P35916 1363 aa7.08□□□□□ -1.28
SF3B3-214ENST00000572365 FZD9O00144 591 aa7.08□□□□□ -1.28
SF3B3-214ENST00000572365 CA12O43570 354 aa7.08□□□□□ -1.28
SF3B3-214ENST00000572365 EFCAB14O75071 495 aa7.08□□□□□ -1.28
SF3B3-214ENST00000572365 IGHA1P01876 353 aa7.08□□□□□ -1.28
SF3B3-214ENST00000572365 HMGB1P09429 215 aaKnown RBP7.08□□□□□ -1.28
SF3B3-214ENST00000572365 SRGNP10124 158 aa7.08□□□□□ -1.28
SF3B3-214ENST00000572365 ENDOUP21128 410 aaKnown RBP7.08□□□□□ -1.28
SF3B3-214ENST00000572365 IARSP41252 1262 aaKnown RBP7.08□□□□□ -1.28
SF3B3-214ENST00000572365 PIP4K2AP48426 406 aaPredicted RBP7.08□□□□□ -1.28
SF3B3-214ENST00000572365 STYK1Q6J9G0 422 aa7.08□□□□□ -1.28
SF3B3-214ENST00000572365 MAMDC2Q7Z304 686 aaPredicted RBP7.08□□□□□ -1.28
SF3B3-214ENST00000572365 DHX37Q8IY37 1157 aaKnown RBP7.08□□□□□ -1.28
SF3B3-214ENST00000572365 ANKRD13AQ8IZ07 590 aa7.08□□□□□ -1.28
SF3B3-214ENST00000572365 SLC7A14Q8TBB6 771 aa7.08□□□□□ -1.28
SF3B3-214ENST00000572365 FOXP3Q9BZS1 431 aa7.08□□□□□ -1.28
SF3B3-214ENST00000572365 SLC52A2Q9HAB3 445 aa7.08□□□□□ -1.28
SF3B3-214ENST00000572365 TRIM39Q9HCM9 518 aa7.08□□□□□ -1.28
SF3B3-214ENST00000572365 SFMBT1Q9UHJ3 866 aa7.08□□□□□ -1.28
SF3B3-214ENST00000572365 NPFFR2Q9Y5X5 522 aa7.08□□□□□ -1.28
SF3B3-214ENST00000572365 COL15A1P39059 1388 aa7.08□□□□□ -1.28
SF3B3-214ENST00000572365 COL4A5P29400 1685 aa7.07□□□□□ -1.28
SF3B3-214ENST00000572365 BLACEA4D250 179 aa7.07□□□□□ -1.28
SF3B3-214ENST00000572365 ESR1P03372 595 aa7.07□□□□□ -1.28
SF3B3-214ENST00000572365 HOXA10P31260 410 aaPredicted RBP7.07□□□□□ -1.28
SF3B3-214ENST00000572365 SEPHS1P49903 392 aa7.07□□□□□ -1.28
SF3B3-214ENST00000572365 HUNKP57058 714 aa7.07□□□□□ -1.28
SF3B3-214ENST00000572365 EIF4A2Q14240 407 aaKnown RBP7.07□□□□□ -1.28
SF3B3-214ENST00000572365 MSMPQ1L6U9 139 aa7.07□□□□□ -1.28
SF3B3-214ENST00000572365 CCDC93Q567U6 631 aa7.07□□□□□ -1.28
SF3B3-214ENST00000572365 E4F1Q66K89 784 aaPredicted RBP7.07□□□□□ -1.28
SF3B3-214ENST00000572365 GPC2Q8N158 579 aa7.07□□□□□ -1.28
SF3B3-214ENST00000572365 DCAF4Q8WV16 495 aa7.07□□□□□ -1.28
SF3B3-214ENST00000572365 GCC1Q96CN9 775 aa7.07□□□□□ -1.28
SF3B3-214ENST00000572365 MASTLQ96GX5 879 aa7.07□□□□□ -1.28
SF3B3-214ENST00000572365 HRASLS5Q96KN8 279 aa7.07□□□□□ -1.28
SF3B3-214ENST00000572365 ATP13A1Q9HD20 1204 aa7.07□□□□□ -1.28
SF3B3-214ENST00000572365 GPRC5CQ9NQ84 441 aa7.07□□□□□ -1.28
SF3B3-214ENST00000572365 ZNF281Q9Y2X9 895 aa7.07□□□□□ -1.28
SF3B3-214ENST00000572365 PCDHA11Q9Y5I1 949 aa7.07□□□□□ -1.28
SF3B3-214ENST00000572365 UNC80Q8N2C7 3258 aa7.07□□□□□ -1.28
SF3B3-214ENST00000572365 ZNF831Q5JPB2 1677 aa7.06□□□□□ -1.28
SF3B3-214ENST00000572365 A0A087X0B3 334 aa7.06□□□□□ -1.28
SF3B3-214ENST00000572365 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.06□□□□□ -1.28
SF3B3-214ENST00000572365 TMEM82A0PJX8 343 aa7.06□□□□□ -1.28
SF3B3-214ENST00000572365 IRS4O14654 1257 aaPredicted RBP7.06□□□□□ -1.28
SF3B3-214ENST00000572365 FGF10O15520 208 aaPredicted RBP7.06□□□□□ -1.28
SF3B3-214ENST00000572365 TBC1D8O95759 1140 aa7.06□□□□□ -1.28
SF3B3-214ENST00000572365 TGFB1P01137 390 aa7.06□□□□□ -1.28
SF3B3-214ENST00000572365 GSTM1P09488 218 aa7.06□□□□□ -1.28
SF3B3-214ENST00000572365 TEKQ02763 1124 aa7.06□□□□□ -1.28
SF3B3-214ENST00000572365 PRKCQQ04759 706 aa7.06□□□□□ -1.28
SF3B3-214ENST00000572365 PLEKHO1Q53GL0 409 aaPredicted RBP7.06□□□□□ -1.28
SF3B3-214ENST00000572365 RSPO2Q6UXX9 243 aaPredicted RBP7.06□□□□□ -1.28
SF3B3-214ENST00000572365 USP53Q70EK8 1073 aa7.06□□□□□ -1.28
SF3B3-214ENST00000572365 KRT26Q7Z3Y9 468 aa7.06□□□□□ -1.28
SF3B3-214ENST00000572365 CTU1Q7Z7A3 348 aaKnown RBP7.06□□□□□ -1.28
SF3B3-214ENST00000572365 THNSL2Q86YJ6 484 aa7.06□□□□□ -1.28
SF3B3-214ENST00000572365 PPIL6Q8IXY8 311 aa7.06□□□□□ -1.28
SF3B3-214ENST00000572365 CNBD1Q8NA66 436 aa7.06□□□□□ -1.28
SF3B3-214ENST00000572365 ASB11Q8WXH4 323 aa7.06□□□□□ -1.28
SF3B3-214ENST00000572365 MAGEC2Q9UBF1 373 aaPredicted RBP7.06□□□□□ -1.28
SF3B3-214ENST00000572365 NDOR1Q9UHB4 597 aa7.06□□□□□ -1.28
SF3B3-214ENST00000572365 VAV3Q9UKW4 847 aa7.06□□□□□ -1.28
SF3B3-214ENST00000572365 COL4A3BPQ9Y5P4 624 aa7.06□□□□□ -1.28
SF3B3-214ENST00000572365 HTTP42858 3142 aa7.06□□□□□ -1.28
SF3B3-214ENST00000572365 RANBP2P49792 3224 aaKnown RBP7.06□□□□□ -1.28
SF3B3-214ENST00000572365 SSU72P8A0A1W2PR75 194 aa7.05□□□□□ -1.28
SF3B3-214ENST00000572365 ARNTLO00327 626 aa7.05□□□□□ -1.28
SF3B3-214ENST00000572365 MEFVO15553 781 aaPredicted RBP7.05□□□□□ -1.28
SF3B3-214ENST00000572365 DNAJC8O75937 253 aaPredicted RBP7.05□□□□□ -1.28
SF3B3-214ENST00000572365 PLS3P13797 630 aa7.05□□□□□ -1.28
SF3B3-214ENST00000572365 SDSP20132 328 aa7.05□□□□□ -1.28
SF3B3-214ENST00000572365 BRAPQ7Z569 592 aa7.05□□□□□ -1.28
SF3B3-214ENST00000572365 CREG2Q8IUH2 290 aa7.05□□□□□ -1.28
SF3B3-214ENST00000572365 KSR1Q8IVT5 923 aa7.05□□□□□ -1.28
SF3B3-214ENST00000572365 CCDC103Q8IW40 242 aa7.05□□□□□ -1.28
SF3B3-214ENST00000572365 JDP2Q8WYK2 163 aa7.05□□□□□ -1.28
SF3B3-214ENST00000572365 MISP3Q96FF7 219 aa7.05□□□□□ -1.28
SF3B3-214ENST00000572365 SCLYQ96I15 445 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms