RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 PDGFCQ9NRA1 345 aa12.58□□□□□ -0.4
SNX1-212ENST00000560861 DACH1Q9UI36 760 aa12.58□□□□□ -0.4
SNX1-212ENST00000560861 CASP8AP2Q9UKL3 1982 aa12.58□□□□□ -0.4
SNX1-212ENST00000560861 LGR5O75473 907 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 GGPS1O95749 300 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 SSBP05455 408 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNX1-212ENST00000560861 PSAPP07602 524 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 ATP4AP20648 1035 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 PRCPP42785 496 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 RARRES1P49788 294 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 ZNF131P52739 623 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 MYL5Q02045 173 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 COASYQ13057 564 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 MAPK7Q13164 816 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 LY6KQ17RY6 165 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 CELF3Q5SZQ8 465 aaKnown RBP12.57□□□□□ -0.4
SNX1-212ENST00000560861 SCFD2Q8WU76 684 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 PDLIM2Q96JY6 352 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 REEP2Q9BRK0 252 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 TINF2Q9BSI4 451 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 ANKEF1Q9NU02 776 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 EXOC1Q9NV70 894 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 KCND2Q9NZV8 630 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 TCEAL9Q9UHQ7 104 aa12.57□□□□□ -0.4
SNX1-212ENST00000560861 MAFBQ9Y5Q3 323 aaPredicted RBP12.57□□□□□ -0.4
SNX1-212ENST00000560861 ZNF18P17022 549 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 GUCY2CP25092 1073 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 ARHGAP1Q07960 439 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 PSMD2Q13200 908 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 OLFML2BQ68BL8 750 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 SWSAP1Q6NVH7 229 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 MIS18BP1Q6P0N0 1132 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 SARM1Q6SZW1 724 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 PAXIP1Q6ZW49 1069 aaPredicted RBP12.56□□□□□ -0.4
SNX1-212ENST00000560861 ANO5Q75V66 913 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 DPP9Q86TI2 863 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 DAW1Q8N136 415 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 AFAP1L1Q8TED9 768 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 COPS5Q92905 334 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 ATP6V0A1Q93050 837 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 HPS3Q969F9 1004 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 CCDC47Q96A33 483 aaKnown RBP12.56□□□□□ -0.4
SNX1-212ENST00000560861 EMID1Q96A84 441 aaPredicted RBP12.56□□□□□ -0.4
SNX1-212ENST00000560861 PPP1R9BQ96SB3 815 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 GPR20Q99678 358 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 BMP2KQ9NSY1 1161 aaPredicted RBP12.56□□□□□ -0.4
SNX1-212ENST00000560861 PANK4Q9NVE7 773 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 FLRT1Q9NZU1 646 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 GABBR1Q9UBS5 961 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 SAMM50Q9Y512 469 aa12.56□□□□□ -0.4
SNX1-212ENST00000560861 TMEM150BA6NC51 233 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 SMTNL1A8MU46 457 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 RSPH10B2B2RC85 870 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 BACH1O14867 736 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 SORBS3O60504 671 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 RSPH10BP0C881 870 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 TXNP10599 105 aaKnown RBP12.55□□□□□ -0.4
SNX1-212ENST00000560861 YWHABP31946 246 aaKnown RBP12.55□□□□□ -0.4
SNX1-212ENST00000560861 CAP1Q01518 475 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 GRM1Q13255 1194 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 TTLL4Q14679 1199 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 FAM26FQ5R3K3 315 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 PADI6Q6TGC4 694 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 CCDC65Q8IXS2 484 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 TRMT44Q8IYL2 757 aaKnown RBP12.55□□□□□ -0.4
SNX1-212ENST00000560861 GUF1Q8N442 669 aaKnown RBP12.55□□□□□ -0.4
SNX1-212ENST00000560861 GLIS3Q8NEA6 775 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 SOCS4Q8WXH5 440 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 FIZ1Q96SL8 496 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 CEP89Q96ST8 783 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 APBA2Q99767 749 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 FGFBP2Q9BYJ0 223 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 PDLIM7Q9NR12 457 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 SLC5A4Q9NY91 659 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 RWDD2AQ9UIY3 292 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 EMSYQ7Z589 1322 aa12.55□□□□□ -0.4
SNX1-212ENST00000560861 ARHGEF35A5YM69 484 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 DKC1O60832 514 aaKnown RBP eCLIP12.54□□□□□ -0.4
SNX1-212ENST00000560861 HOXD8P13378 290 aaPredicted RBP12.54□□□□□ -0.4
SNX1-212ENST00000560861 IDEP14735 1019 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 PTGS1P23219 599 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 MAP2K2P36507 400 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 RGS2P41220 211 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 PPP1R2P41236 205 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 VEGFBP49765 207 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 PRKCEQ02156 737 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 SP4Q02446 784 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 HSDL1Q3SXM5 330 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 XKR3Q5GH77 459 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 CDKAL1Q5VV42 579 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 SPATA1Q5VX52 437 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 TTI2Q6NXR4 508 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 FOXR2Q6PJQ5 311 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 EPM2AIP1Q7L775 607 aaPredicted RBP12.54□□□□□ -0.4
SNX1-212ENST00000560861 NELFBQ8WX92 580 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 SEPT1Q8WYJ6 367 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 DHTKD1Q96HY7 919 aaPredicted RBP12.54□□□□□ -0.4
SNX1-212ENST00000560861 TRIM47Q96LD4 638 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 ARHGAP39Q9C0H5 1083 aa12.54□□□□□ -0.4
SNX1-212ENST00000560861 ABHD16BQ9H3Z7 469 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms