RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 BPIFA3Q9BQP9 254 aa18.49■□□□□ 0.55
TPM1-219ENST00000559397 RNF208Q9H0X6 261 aa18.49■□□□□ 0.55
TPM1-219ENST00000559397 SAMM50Q9Y512 469 aa18.49■□□□□ 0.55
TPM1-219ENST00000559397 BIN1O00499 593 aa18.48■□□□□ 0.55
TPM1-219ENST00000559397 LGR5O75473 907 aa18.48■□□□□ 0.55
TPM1-219ENST00000559397 CPT1AP50416 773 aa18.48■□□□□ 0.55
TPM1-219ENST00000559397 MIS18BP1Q6P0N0 1132 aa18.48■□□□□ 0.55
TPM1-219ENST00000559397 CABP7Q86V35 215 aa18.48■□□□□ 0.55
TPM1-219ENST00000559397 CCDC60Q8IWA6 550 aaPredicted RBP18.48■□□□□ 0.55
TPM1-219ENST00000559397 NAT10Q9H0A0 1025 aaKnown RBP18.48■□□□□ 0.55
TPM1-219ENST00000559397 MAN1B1Q9UKM7 699 aa18.48■□□□□ 0.55
TPM1-219ENST00000559397 PPFIA4O75335 1185 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 SLITRK3O94933 977 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 PSAPP07602 524 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 C6orf222P0C671 652 aaPredicted RBP18.47■□□□□ 0.55
TPM1-219ENST00000559397 SPATA31C1P0DKV0 1188 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 BEX3Q00994 111 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 DPYDQ12882 1025 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 FSCN1Q16658 493 aaKnown RBP18.47■□□□□ 0.55
TPM1-219ENST00000559397 TRIML1Q8N9V2 468 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 ERMNQ8TAM6 284 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 SMARCE1Q969G3 411 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 DYDC2Q96IM9 177 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 MTRQ99707 1265 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 POLR3CQ9BUI4 534 aaPredicted RBP18.47■□□□□ 0.55
TPM1-219ENST00000559397 SPC25Q9HBM1 224 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 RGL1Q9NZL6 768 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 CCDC39Q9UFE4 941 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 STK24Q9Y6E0 443 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 MED24O75448 989 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 SMC2O95347 1197 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 CST5P28325 142 aaPredicted RBP18.47■□□□□ 0.55
TPM1-219ENST00000559397 STAT6P42226 847 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 MORC3Q14149 939 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 ECM1Q16610 540 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 DGKDQ16760 1214 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 RRAGBQ5VZM2 374 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 KRT79Q5XKE5 535 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 CCSAPQ6IQ19 270 aaPredicted RBP18.47■□□□□ 0.55
TPM1-219ENST00000559397 SWSAP1Q6NVH7 229 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 CATSPER3Q86XQ3 398 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 NEK9Q8TD19 979 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 SNX29Q8TEQ0 813 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 DEFB118Q96PH6 123 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 CUEDC2Q9H467 287 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 GABBR1Q9UBS5 961 aa18.47■□□□□ 0.55
TPM1-219ENST00000559397 GTPBP6O43824 516 aaPredicted RBP18.46■□□□□ 0.55
TPM1-219ENST00000559397 LGALS2P05162 132 aa18.46■□□□□ 0.55
TPM1-219ENST00000559397 P4HBP07237 508 aaKnown RBP18.46■□□□□ 0.55
TPM1-219ENST00000559397 BMP6P22004 513 aa18.46■□□□□ 0.55
TPM1-219ENST00000559397 RPA1P27694 616 aa18.46■□□□□ 0.55
TPM1-219ENST00000559397 AFMP43652 599 aa18.46■□□□□ 0.55
TPM1-219ENST00000559397 UGCGQ16739 394 aa18.46■□□□□ 0.55
TPM1-219ENST00000559397 HAUS3Q68CZ6 603 aa18.46■□□□□ 0.55
TPM1-219ENST00000559397 DHX40Q8IX18 779 aaKnown RBP18.46■□□□□ 0.55
TPM1-219ENST00000559397 BANK1Q8NDB2 785 aa18.46■□□□□ 0.55
TPM1-219ENST00000559397 AFAP1L1Q8TED9 768 aa18.46■□□□□ 0.55
TPM1-219ENST00000559397 MAGEF1Q9HAY2 307 aa18.46■□□□□ 0.55
TPM1-219ENST00000559397 TUFT1Q9NNX1 390 aa18.46■□□□□ 0.55
TPM1-219ENST00000559397 WRAP73Q9P2S5 460 aaPredicted RBP18.46■□□□□ 0.55
TPM1-219ENST00000559397 MAFBQ9Y5Q3 323 aaPredicted RBP18.46■□□□□ 0.55
TPM1-219ENST00000559397 EMSYQ7Z589 1322 aa18.46■□□□□ 0.55
TPM1-219ENST00000559397 IGSF9BQ9UPX0 1349 aa18.46■□□□□ 0.55
TPM1-219ENST00000559397 MYH9P35579 1960 aaKnown RBP18.45■□□□□ 0.54
TPM1-219ENST00000559397 QARSP47897 775 aaKnown RBP18.45■□□□□ 0.54
TPM1-219ENST00000559397 CYP4A11Q02928 519 aa18.45■□□□□ 0.54
TPM1-219ENST00000559397 CTTNQ14247 550 aaKnown RBP18.45■□□□□ 0.54
TPM1-219ENST00000559397 LRRC41Q15345 812 aa18.45■□□□□ 0.54
TPM1-219ENST00000559397 BRDTQ58F21 947 aaPredicted RBP18.45■□□□□ 0.54
TPM1-219ENST00000559397 GNASQ5JWF2 1037 aa18.45■□□□□ 0.54
TPM1-219ENST00000559397 HYIQ5T013 277 aa18.45■□□□□ 0.54
TPM1-219ENST00000559397 UTP14CQ5TAP6 766 aaKnown RBP18.45■□□□□ 0.54
TPM1-219ENST00000559397 PLPPR4Q7Z2D5 763 aa18.45■□□□□ 0.54
TPM1-219ENST00000559397 LRRC15Q8TF66 581 aa18.45■□□□□ 0.54
TPM1-219ENST00000559397 PNMA5Q96PV4 448 aa18.45■□□□□ 0.54
TPM1-219ENST00000559397 GSDMAQ96QA5 445 aa18.45■□□□□ 0.54
TPM1-219ENST00000559397 LXNQ9BS40 222 aa18.45■□□□□ 0.54
TPM1-219ENST00000559397 C16orf70Q9BSU1 422 aa18.45■□□□□ 0.54
TPM1-219ENST00000559397 ZNF302Q9NR11 478 aa18.45■□□□□ 0.54
TPM1-219ENST00000559397 OGDHLQ9ULD0 1010 aa18.45■□□□□ 0.54
TPM1-219ENST00000559397 POTEB3A0JP26 581 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 AP5Z1O43299 807 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 SLC26A4O43511 780 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 ZNF862O60290 1169 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 GJB1P08034 283 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 PLCG1P19174 1290 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 ATP4AP20648 1035 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 CCT6AP40227 531 aaKnown RBP18.44■□□□□ 0.54
TPM1-219ENST00000559397 STAT5BP51692 787 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 POTEBQ6S5H4 581 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 RNF180Q86T96 592 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 TRIM50Q86XT4 487 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 CRISPLD2Q9H0B8 497 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 KBTBD4Q9NVX7 518 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 BACH1O14867 736 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 SGPL1O95470 568 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 MYL1P05976 194 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 ZNF286BP0CG31 522 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 MUTP22033 750 aa18.44■□□□□ 0.54
TPM1-219ENST00000559397 PSMC5P62195 406 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms