RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 TRIM7Q9C029 511 aa18.82■□□□□ 0.6
PTPN21-208ENST00000556564 VPS18Q9P253 973 aa18.82■□□□□ 0.6
PTPN21-208ENST00000556564 BCL9O00512 1426 aa18.82■□□□□ 0.6
PTPN21-208ENST00000556564 C6orf222P0C671 652 aaPredicted RBP18.82■□□□□ 0.6
PTPN21-208ENST00000556564 TRIM58Q8NG06 486 aa18.82■□□□□ 0.6
PTPN21-208ENST00000556564 LDHAP00338 332 aaKnown RBP18.82■□□□□ 0.6
PTPN21-208ENST00000556564 CCNE1P24864 410 aa18.82■□□□□ 0.6
PTPN21-208ENST00000556564 NBPF9Q3BBW0 867 aa18.82■□□□□ 0.6
PTPN21-208ENST00000556564 SLC10A5Q5PT55 438 aa18.82■□□□□ 0.6
PTPN21-208ENST00000556564 SCYL3Q8IZE3 742 aa18.82■□□□□ 0.6
PTPN21-208ENST00000556564 KRIT1O00522 736 aa18.82■□□□□ 0.6
PTPN21-208ENST00000556564 HPDP32754 393 aaPredicted RBP18.82■□□□□ 0.6
PTPN21-208ENST00000556564 RINT1Q6NUQ1 792 aa18.82■□□□□ 0.6
PTPN21-208ENST00000556564 MTA3Q9BTC8 594 aa18.82■□□□□ 0.6
PTPN21-208ENST00000556564 GCOM2Q9BZD3 368 aaPredicted RBP18.82■□□□□ 0.6
PTPN21-208ENST00000556564 THAP9Q9H5L6 903 aa18.81■□□□□ 0.6
PTPN21-208ENST00000556564 GPC3P51654 580 aa18.81■□□□□ 0.6
PTPN21-208ENST00000556564 UNC13DQ70J99 1090 aa18.81■□□□□ 0.6
PTPN21-208ENST00000556564 SGMS1Q86VZ5 419 aa18.81■□□□□ 0.6
PTPN21-208ENST00000556564 THEM5Q8N1Q8 247 aa18.81■□□□□ 0.6
PTPN21-208ENST00000556564 SLITRK6Q9H5Y7 841 aa18.81■□□□□ 0.6
PTPN21-208ENST00000556564 TUBB2AQ13885 445 aa18.81■□□□□ 0.6
PTPN21-208ENST00000556564 TUBB2BQ9BVA1 445 aa18.81■□□□□ 0.6
PTPN21-208ENST00000556564 ARHGAP23Q9P227 1491 aa18.81■□□□□ 0.6
PTPN21-208ENST00000556564 H7C0C1 242 aa18.81■□□□□ 0.6
PTPN21-208ENST00000556564 ATP5OP48047 213 aa18.81■□□□□ 0.6
PTPN21-208ENST00000556564 C6orf163Q5TEZ5 329 aa18.81■□□□□ 0.6
PTPN21-208ENST00000556564 NKIRAS1Q9NYS0 192 aa18.81■□□□□ 0.6
PTPN21-208ENST00000556564 MYO5BQ9ULV0 1848 aa18.81■□□□□ 0.6
PTPN21-208ENST00000556564 PDHBP11177 359 aa18.81■□□□□ 0.6
PTPN21-208ENST00000556564 ZNF394Q53GI3 561 aa18.81■□□□□ 0.6
PTPN21-208ENST00000556564 AGBL1Q96MI9 1066 aa18.81■□□□□ 0.6
PTPN21-208ENST00000556564 PPP2R2CQ9Y2T4 447 aa18.81■□□□□ 0.6
PTPN21-208ENST00000556564 KIF28PB7ZC32 967 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 ATP5DP30049 168 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 MAPK4P31152 587 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 COASYQ13057 564 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 TKFCQ3LXA3 575 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 HAUS1Q96CS2 278 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 PSMC4P43686 418 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 USP11P51784 963 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 GTF2A2P52657 109 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 TOPORSQ9NS56 1045 aaPredicted RBP18.8■□□□□ 0.6
PTPN21-208ENST00000556564 GGPS1O95749 300 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 ADCY8P40145 1251 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 CTSHP09668 335 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 KCNV1Q6PIU1 500 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 TXNRD3Q86VQ6 643 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 NEK9Q8TD19 979 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 SPZ1Q9BXG8 430 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 SLC12A6Q9UHW9 1150 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 PCDHA10Q9Y5I2 948 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 SAR1BQ9Y6B6 198 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 BZW2Q9Y6E2 419 aaKnown RBP18.8■□□□□ 0.6
PTPN21-208ENST00000556564 NAA35Q5VZE5 725 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 ATG4CQ96DT6 458 aa18.8■□□□□ 0.6
PTPN21-208ENST00000556564 MYO1FO00160 1098 aa18.79■□□□□ 0.6
PTPN21-208ENST00000556564 HDXQ7Z353 690 aa18.79■□□□□ 0.6
PTPN21-208ENST00000556564 MAN1A1P33908 653 aa18.79■□□□□ 0.6
PTPN21-208ENST00000556564 STAT5BP51692 787 aa18.79■□□□□ 0.6
PTPN21-208ENST00000556564 RNF139Q8WU17 664 aa18.79■□□□□ 0.6
PTPN21-208ENST00000556564 UBR1Q8IWV7 1749 aa18.79■□□□□ 0.6
PTPN21-208ENST00000556564 CXCL9Q07325 125 aa18.79■□□□□ 0.6
PTPN21-208ENST00000556564 ARMCX2Q7L311 632 aa18.79■□□□□ 0.6
PTPN21-208ENST00000556564 IGDCC4Q8TDY8 1250 aa18.79■□□□□ 0.6
PTPN21-208ENST00000556564 IVLP07476 585 aa18.79■□□□□ 0.6
PTPN21-208ENST00000556564 YWHABP31946 246 aaKnown RBP18.79■□□□□ 0.6
PTPN21-208ENST00000556564 FAM81BQ96LP2 452 aa18.79■□□□□ 0.6
PTPN21-208ENST00000556564 EPN1Q9Y6I3 576 aaPredicted RBP18.79■□□□□ 0.6
PTPN21-208ENST00000556564 CEP55Q53EZ4 464 aa18.79■□□□□ 0.6
PTPN21-208ENST00000556564 CAPN12Q6ZSI9 719 aa18.79■□□□□ 0.6
PTPN21-208ENST00000556564 PALM2Q8IXS6 379 aa18.79■□□□□ 0.6
PTPN21-208ENST00000556564 C2orf40Q9H1Z8 148 aa18.79■□□□□ 0.6
PTPN21-208ENST00000556564 MROH1Q8NDA8 1641 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 NPHP3-ACAD11A0A0J9YXS1 232 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 SPDYE2BA6NHP3 402 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 SPDYE6P0CI01 402 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 ALDH3A1P30838 453 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 ZNF667Q5HYK9 610 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 DNAJC24Q6P3W2 148 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 KRT222Q8N1A0 295 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 SLC12A2P55011 1212 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 ELMSAN1Q6PJG2 1045 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 SH2D3AQ9BRG2 576 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 TRIM49BA6NDI0 452 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 LRRC63Q05C16 580 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 RGL1Q9NZL6 768 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 HYOU1Q9Y4L1 999 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 SARNPP82979 210 aaKnown RBP18.78■□□□□ 0.6
PTPN21-208ENST00000556564 EXOSC10Q01780 885 aaKnown RBP18.78■□□□□ 0.6
PTPN21-208ENST00000556564 BEST2Q8NFU1 509 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 KRT12Q99456 494 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 PRR29P0C7W0 189 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 NFIAQ12857 509 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 MAP7D1Q3KQU3 841 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 PPP4R3CPQ6ZMV5 832 aa18.78■□□□□ 0.6
PTPN21-208ENST00000556564 GH1P01241 217 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 FCGRTP55899 365 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 TMEM62Q0P6H9 643 aa18.77■□□□□ 0.6
PTPN21-208ENST00000556564 MB21D1Q8N884 522 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms