RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 C17orf102A2RUQ5 167 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 SPTLC2O15270 562 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 TLR3O15455 904 aaKnown RBP15.86■□□□□ 0.13
SNX6-206ENST00000556162 ZNF862O60290 1169 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 LONP1P36776 959 aaKnown RBP15.86■□□□□ 0.13
SNX6-206ENST00000556162 PRKCEQ02156 737 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 TLE2Q04725 743 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 PPFIA1Q13136 1202 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 KRT79Q5XKE5 535 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 DPF3Q92784 378 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 PPP6R2O75170 966 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 OATP04181 439 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 INSRRP14616 1297 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 RPA1P27694 616 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 XKR3Q5GH77 459 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 CATSPER3Q86XQ3 398 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 C4orf19Q8IY42 314 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 KRI1Q8N9T8 703 aaKnown RBP15.86■□□□□ 0.13
SNX6-206ENST00000556162 KCNG4Q8TDN1 519 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 POLR3CQ9BUI4 534 aaPredicted RBP15.86■□□□□ 0.13
SNX6-206ENST00000556162 TUFT1Q9NNX1 390 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 SETD4Q9NVD3 440 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 FBXO2Q9UK22 296 aaPredicted RBP15.86■□□□□ 0.13
SNX6-206ENST00000556162 NOD1Q9Y239 953 aa15.86■□□□□ 0.13
SNX6-206ENST00000556162 RRN3P2A6NIE6 340 aa15.85■□□□□ 0.13
SNX6-206ENST00000556162 DDX11L8A8MPP1 907 aa15.85■□□□□ 0.13
SNX6-206ENST00000556162 EVI5O60447 810 aa15.85■□□□□ 0.13
SNX6-206ENST00000556162 CCT6AP40227 531 aaKnown RBP15.85■□□□□ 0.13
SNX6-206ENST00000556162 IGBP1P78318 339 aa15.85■□□□□ 0.13
SNX6-206ENST00000556162 GRIK4Q16099 956 aa15.85■□□□□ 0.13
SNX6-206ENST00000556162 PTGISQ16647 500 aa15.85■□□□□ 0.13
SNX6-206ENST00000556162 ZNF484Q5JVG2 852 aa15.85■□□□□ 0.13
SNX6-206ENST00000556162 GDF6Q6KF10 455 aaPredicted RBP15.85■□□□□ 0.13
SNX6-206ENST00000556162 FAM126BQ8IXS8 530 aa15.85■□□□□ 0.13
SNX6-206ENST00000556162 SNX29Q8TEQ0 813 aa15.85■□□□□ 0.13
SNX6-206ENST00000556162 TRPV6Q9H1D0 765 aa15.85■□□□□ 0.13
SNX6-206ENST00000556162 TRMT13Q9NUP7 481 aaKnown RBP15.85■□□□□ 0.13
SNX6-206ENST00000556162 RCOR1Q9UKL0 485 aa15.85■□□□□ 0.13
SNX6-206ENST00000556162 PP2D1A8MPX8 630 aa15.84■□□□□ 0.13
SNX6-206ENST00000556162 B4GALT4O60513 344 aa15.84■□□□□ 0.13
SNX6-206ENST00000556162 MED24O75448 989 aa15.84■□□□□ 0.13
SNX6-206ENST00000556162 SPATA31C1P0DKV0 1188 aa15.84■□□□□ 0.13
SNX6-206ENST00000556162 CDC25AP30304 524 aa15.84■□□□□ 0.13
SNX6-206ENST00000556162 UBA7P41226 1012 aa15.84■□□□□ 0.13
SNX6-206ENST00000556162 GRIN1Q05586 938 aa15.84■□□□□ 0.13
SNX6-206ENST00000556162 OTUD6AQ7L8S5 288 aa15.84■□□□□ 0.13
SNX6-206ENST00000556162 LMBR1Q8WVP7 490 aa15.84■□□□□ 0.13
SNX6-206ENST00000556162 WRAP73Q9P2S5 460 aaPredicted RBP15.84■□□□□ 0.13
SNX6-206ENST00000556162 SEPT9Q9UHD8 586 aaPredicted RBP15.84■□□□□ 0.13
SNX6-206ENST00000556162 LYPLA2O95372 231 aa15.84■□□□□ 0.13
SNX6-206ENST00000556162 CD4P01730 458 aa15.84■□□□□ 0.13
SNX6-206ENST00000556162 MUTP22033 750 aa15.84■□□□□ 0.13
SNX6-206ENST00000556162 YWHABP31946 246 aaKnown RBP15.84■□□□□ 0.13
SNX6-206ENST00000556162 PIAS4Q8N2W9 510 aaPredicted RBP15.84■□□□□ 0.13
SNX6-206ENST00000556162 CHAMP1Q96JM3 812 aa15.84■□□□□ 0.13
SNX6-206ENST00000556162 SPATA32Q96LK8 384 aa15.84■□□□□ 0.13
SNX6-206ENST00000556162 CLIC6Q96NY7 704 aa15.84■□□□□ 0.13
SNX6-206ENST00000556162 NIFKQ9BYG3 293 aaKnown RBP15.84■□□□□ 0.13
SNX6-206ENST00000556162 SCAND2PQ9GZW5 306 aaPredicted RBP15.84■□□□□ 0.13
SNX6-206ENST00000556162 CSRNP2Q9H175 543 aa15.84■□□□□ 0.13
SNX6-206ENST00000556162 STBD1O95210 358 aa15.83■□□□□ 0.12
SNX6-206ENST00000556162 HOXC8P31273 242 aa15.83■□□□□ 0.12
SNX6-206ENST00000556162 ME1P48163 572 aa15.83■□□□□ 0.12
SNX6-206ENST00000556162 ZNF200P98182 395 aaPredicted RBP15.83■□□□□ 0.12
SNX6-206ENST00000556162 FAAP100Q0VG06 881 aa15.83■□□□□ 0.12
SNX6-206ENST00000556162 ANO5Q75V66 913 aa15.83■□□□□ 0.12
SNX6-206ENST00000556162 NACC1Q96RE7 527 aa15.83■□□□□ 0.12
SNX6-206ENST00000556162 MYH9P35579 1960 aaKnown RBP15.83■□□□□ 0.12
SNX6-206ENST00000556162 COL1A2P08123 1366 aa15.83■□□□□ 0.12
SNX6-206ENST00000556162 TREHO43280 583 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 CLTBP09497 229 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 XRCC6P12956 609 aaKnown RBP eCLIP15.82■□□□□ 0.12
SNX6-206ENST00000556162 ADAM17P78536 824 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 HIC1Q14526 733 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 ZRSR1Q15695 479 aaKnown RBP15.82■□□□□ 0.12
SNX6-206ENST00000556162 CABP7Q86V35 215 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 C7orf61Q8IZ16 206 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 LEO1Q8WVC0 666 aaPredicted RBP15.82■□□□□ 0.12
SNX6-206ENST00000556162 TRAPPC12Q8WVT3 735 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 CDK5RAP3Q96JB5 506 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 MMTAG2Q9BU76 263 aaKnown RBP15.82■□□□□ 0.12
SNX6-206ENST00000556162 TMEM39AQ9NV64 488 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 TUBE1Q9UJT0 475 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 KIAA1024Q9UPX6 916 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 MYH15Q9Y2K3 1946 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 CUTAO60888 179 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 MTERF2Q49AM1 385 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 SPECC1Q5M775 1068 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 MARCH8Q5T0T0 291 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 POTEGQ6S5H5 508 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 PIGOQ8TEQ8 1089 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 CALML4Q96GE6 196 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 CEP170P1Q96L14 293 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 CCDC43Q96MW1 224 aaKnown RBP15.82■□□□□ 0.12
SNX6-206ENST00000556162 NT5C3AQ9H0P0 336 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 PRKAG2Q9UGJ0 569 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 NR2E3Q9Y5X4 410 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 KDM3AQ9Y4C1 1321 aa15.82■□□□□ 0.12
SNX6-206ENST00000556162 TMEM150BA6NC51 233 aa15.81■□□□□ 0.12
SNX6-206ENST00000556162 ZBTB42B2RXF5 422 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms