RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 MPHOSPH10O00566 681 aaKnown RBP13.52□□□□□ -0.25
HDAC7-230ENST00000552960 FAM107AO95990 144 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 SERPING1P05155 500 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 GNA11P29992 359 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 PRPHP41219 470 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 PPP1R2P41236 205 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 TNNI2P48788 182 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 PSEN1P49768 467 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 IFFO1Q0D2I5 559 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 PRPF4BQ13523 1007 aaKnown RBP13.52□□□□□ -0.25
HDAC7-230ENST00000552960 TMEM266Q2M3C6 531 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 KRT79Q5XKE5 535 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 DGKHQ86XP1 1220 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 MYOCDQ8IZQ8 938 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 KIRREL3Q8IZU9 778 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 WHAMMQ8TF30 809 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 PRMT6Q96LA8 375 aaPredicted RBP13.52□□□□□ -0.25
HDAC7-230ENST00000552960 TAF1DQ9H5J8 278 aaPredicted RBP13.52□□□□□ -0.25
HDAC7-230ENST00000552960 MAGEF1Q9HAY2 307 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 GOPCQ9HD26 462 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 COL4A3BPQ9Y5P4 624 aa13.52□□□□□ -0.25
HDAC7-230ENST00000552960 PJA2O43164 708 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 FSBPO95073 299 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 ACTN1P12814 892 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 ITGB3BPQ13352 177 aaPredicted RBP13.51□□□□□ -0.25
HDAC7-230ENST00000552960 KRT71Q3SY84 523 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 CDAN1Q8IWY9 1227 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 USP38Q8NB14 1042 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 RUBCNQ92622 972 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 SLC40A1Q9NP59 571 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 FAM198AQ9UFP1 575 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 AMACRQ9UHK6 382 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 FBXL5Q9UKA1 691 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 TLDC2A0PJX2 215 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 PHF20L1A8MW92 1017 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 KRT18P05783 430 aaKnown RBP13.51□□□□□ -0.25
HDAC7-230ENST00000552960 PDHBP11177 359 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 SCP2P22307 547 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 FLT3P36888 993 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 NAB2Q15742 525 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 QPCTQ16769 361 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 SPATS2Q86XZ4 545 aaKnown RBP13.51□□□□□ -0.25
HDAC7-230ENST00000552960 GUF1Q8N442 669 aaKnown RBP13.51□□□□□ -0.25
HDAC7-230ENST00000552960 ARFGAP2Q8N6H7 521 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 IQCDQ96DY2 449 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 HAUS2Q9NVX0 235 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 GRID2IPA4D2P6 1211 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 GMNCA6NCL1 334 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 DCDC2CA8MYV0 355 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 DAPK3O43293 454 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 SLC37A4O43826 429 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 LCA5LO95447 670 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 PLCG2P16885 1265 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 FKBP3Q00688 224 aaKnown RBP13.51□□□□□ -0.25
HDAC7-230ENST00000552960 GABPAQ06546 454 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 ASIC2Q16515 512 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 ASTE1Q2TB18 679 aaPredicted RBP13.51□□□□□ -0.25
HDAC7-230ENST00000552960 TCERG1LQ5VWI1 586 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 SLF2Q8IX21 1173 aa13.51□□□□□ -0.25
HDAC7-230ENST00000552960 ZKSCAN4Q969J2 545 aaPredicted RBP13.51□□□□□ -0.25
HDAC7-230ENST00000552960 SSU72P8A0A1W2PR75 194 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 CLRN2A0PK11 232 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 KRIT1O00522 736 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 CHUKO15111 745 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 SART1O43290 800 aaKnown RBP13.5□□□□□ -0.25
HDAC7-230ENST00000552960 SHMT1P34896 483 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 MAGOHP61326 146 aaKnown RBP13.5□□□□□ -0.25
HDAC7-230ENST00000552960 SPRED3Q2MJR0 410 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 STRIP1Q5VSL9 837 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 LRRC55Q6ZSA7 311 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 TTLL6Q8N841 843 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 MDM1Q8TC05 714 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 MAGOHBQ96A72 148 aaKnown RBP13.5□□□□□ -0.25
HDAC7-230ENST00000552960 PNMA5Q96PV4 448 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 FGFBP2Q9BYJ0 223 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 CELF4Q9BZC1 486 aaKnown RBP13.5□□□□□ -0.25
HDAC7-230ENST00000552960 VCPKMTQ9H867 229 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 CEP72Q9P209 647 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 RNF14Q9UBS8 474 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 NPHP3-ACAD11A0A0J9YXS1 232 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 NF2P35240 595 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 JAG1P78504 1218 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 LRRC63Q05C16 580 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 SLC18A3Q16572 532 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 HERC4Q5GLZ8 1057 aaPredicted RBP13.5□□□□□ -0.25
HDAC7-230ENST00000552960 MEI1Q5TIA1 1274 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 NEUROG2Q9H2A3 272 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 TMBIM4Q9HC24 238 aa13.5□□□□□ -0.25
HDAC7-230ENST00000552960 DDX20Q9UHI6 824 aaKnown RBP13.5□□□□□ -0.25
HDAC7-230ENST00000552960 NOL4O94818 638 aa13.49□□□□□ -0.25
HDAC7-230ENST00000552960 TNFRSF8P28908 595 aa13.49□□□□□ -0.25
HDAC7-230ENST00000552960 FAM26FQ5R3K3 315 aa13.49□□□□□ -0.25
HDAC7-230ENST00000552960 NEDD1Q8NHV4 660 aa13.49□□□□□ -0.25
HDAC7-230ENST00000552960 INPP4AQ96PE3 977 aaPredicted RBP13.49□□□□□ -0.25
HDAC7-230ENST00000552960 ZMYND12Q9H0C1 365 aa13.49□□□□□ -0.25
HDAC7-230ENST00000552960 PANK4Q9NVE7 773 aa13.49□□□□□ -0.25
HDAC7-230ENST00000552960 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.49□□□□□ -0.25
HDAC7-230ENST00000552960 SERPINB13Q9UIV8 391 aa13.49□□□□□ -0.25
HDAC7-230ENST00000552960 ITGA4P13612 1032 aa13.49□□□□□ -0.25
HDAC7-230ENST00000552960 GALNT17Q6IS24 598 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms