RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 EVI5O60447 810 aa24.04■■□□□ 1.44
NEK3-202ENST00000550841 SLITRK3O94933 977 aa24.04■■□□□ 1.44
NEK3-202ENST00000550841 NCLP19338 710 aaKnown RBP24.04■■□□□ 1.44
NEK3-202ENST00000550841 MARCKSP29966 332 aaPredicted RBP24.04■■□□□ 1.44
NEK3-202ENST00000550841 XKR3Q5GH77 459 aa24.04■■□□□ 1.44
NEK3-202ENST00000550841 ANKRD33Q7Z3H0 272 aa24.04■■□□□ 1.44
NEK3-202ENST00000550841 TPH2Q8IWU9 490 aa24.04■■□□□ 1.44
NEK3-202ENST00000550841 C4orf19Q8IY42 314 aa24.04■■□□□ 1.44
NEK3-202ENST00000550841 KRI1Q8N9T8 703 aaKnown RBP24.04■■□□□ 1.44
NEK3-202ENST00000550841 BANK1Q8NDB2 785 aa24.04■■□□□ 1.44
NEK3-202ENST00000550841 SCAND2PQ9GZW5 306 aaPredicted RBP24.04■■□□□ 1.44
NEK3-202ENST00000550841 RGL1Q9NZL6 768 aa24.04■■□□□ 1.44
NEK3-202ENST00000550841 HDAC6Q9UBN7 1215 aa24.04■■□□□ 1.44
NEK3-202ENST00000550841 RCOR1Q9UKL0 485 aa24.04■■□□□ 1.44
NEK3-202ENST00000550841 NRCAMQ92823 1304 aa24.04■■□□□ 1.44
NEK3-202ENST00000550841 C17orf102A2RUQ5 167 aa24.03■■□□□ 1.44
NEK3-202ENST00000550841 SLC26A4O43511 780 aa24.03■■□□□ 1.44
NEK3-202ENST00000550841 OATP04181 439 aa24.03■■□□□ 1.44
NEK3-202ENST00000550841 SMIM10L2AP0DMW4 78 aa24.03■■□□□ 1.44
NEK3-202ENST00000550841 SMIM10L2BP0DMW5 78 aa24.03■■□□□ 1.44
NEK3-202ENST00000550841 RPA1P27694 616 aa24.03■■□□□ 1.44
NEK3-202ENST00000550841 RTP1P59025 263 aa24.03■■□□□ 1.44
NEK3-202ENST00000550841 LRRC26Q2I0M4 334 aa24.03■■□□□ 1.44
NEK3-202ENST00000550841 ZNF484Q5JVG2 852 aa24.03■■□□□ 1.44
NEK3-202ENST00000550841 OTUD6AQ7L8S5 288 aa24.03■■□□□ 1.44
NEK3-202ENST00000550841 LXNQ9BS40 222 aa24.03■■□□□ 1.44
NEK3-202ENST00000550841 GTF2IRD1Q9UHL9 959 aa24.03■■□□□ 1.44
NEK3-202ENST00000550841 KAT6AQ92794 2004 aa24.03■■□□□ 1.44
NEK3-202ENST00000550841 LYPLA2O95372 231 aa24.02■■□□□ 1.44
NEK3-202ENST00000550841 XRCC6P12956 609 aaKnown RBP eCLIP24.02■■□□□ 1.44
NEK3-202ENST00000550841 ATP4AP20648 1035 aa24.02■■□□□ 1.44
NEK3-202ENST00000550841 CCT6AP40227 531 aaKnown RBP24.02■■□□□ 1.44
NEK3-202ENST00000550841 PRKCEQ02156 737 aa24.02■■□□□ 1.44
NEK3-202ENST00000550841 CYP4A11Q02928 519 aa24.02■■□□□ 1.44
NEK3-202ENST00000550841 PPFIA1Q13136 1202 aa24.02■■□□□ 1.44
NEK3-202ENST00000550841 CTTNQ14247 550 aaKnown RBP24.02■■□□□ 1.44
NEK3-202ENST00000550841 FBXO2Q9UK22 296 aaPredicted RBP24.02■■□□□ 1.44
NEK3-202ENST00000550841 ATP11BQ9Y2G3 1177 aa24.02■■□□□ 1.44
NEK3-202ENST00000550841 DDX11L8A8MPP1 907 aa24.01■■□□□ 1.43
NEK3-202ENST00000550841 ZNF862O60290 1169 aa24.01■■□□□ 1.43
NEK3-202ENST00000550841 UBA7P41226 1012 aa24.01■■□□□ 1.43
NEK3-202ENST00000550841 UGCGQ16739 394 aa24.01■■□□□ 1.43
NEK3-202ENST00000550841 TRIM60Q495X7 471 aa24.01■■□□□ 1.43
NEK3-202ENST00000550841 CATSPER3Q86XQ3 398 aa24.01■■□□□ 1.43
NEK3-202ENST00000550841 KCTD17Q8N5Z5 321 aa24.01■■□□□ 1.43
NEK3-202ENST00000550841 SNX29Q8TEQ0 813 aa24.01■■□□□ 1.43
NEK3-202ENST00000550841 NIFKQ9BYG3 293 aaKnown RBP24.01■■□□□ 1.43
NEK3-202ENST00000550841 NOD1Q9Y239 953 aa24.01■■□□□ 1.43
NEK3-202ENST00000550841 WDR81Q562E7 1941 aa24.01■■□□□ 1.43
NEK3-202ENST00000550841 COL1A2P08123 1366 aa24.01■■□□□ 1.43
NEK3-202ENST00000550841 PQBP1O60828 265 aaKnown RBP24■■□□□ 1.43
NEK3-202ENST00000550841 SPATA31C1P0DKV0 1188 aa24■■□□□ 1.43
NEK3-202ENST00000550841 INSRRP14616 1297 aa24■■□□□ 1.43
NEK3-202ENST00000550841 TLE2Q04725 743 aa24■■□□□ 1.43
NEK3-202ENST00000550841 GRIK4Q16099 956 aa24■■□□□ 1.43
NEK3-202ENST00000550841 FAM126BQ8IXS8 530 aa24■■□□□ 1.43
NEK3-202ENST00000550841 ZNF579Q8NAF0 562 aaKnown RBP24■■□□□ 1.43
NEK3-202ENST00000550841 SPATA32Q96LK8 384 aa24■■□□□ 1.43
NEK3-202ENST00000550841 NACC1Q96RE7 527 aa24■■□□□ 1.43
NEK3-202ENST00000550841 SETD4Q9NVD3 440 aa24■■□□□ 1.43
NEK3-202ENST00000550841 PPME1Q9Y570 386 aa24■■□□□ 1.43
NEK3-202ENST00000550841 CUTAO60888 179 aa23.99■■□□□ 1.43
NEK3-202ENST00000550841 PTGISQ16647 500 aa23.99■■□□□ 1.43
NEK3-202ENST00000550841 GDF6Q6KF10 455 aaPredicted RBP23.99■■□□□ 1.43
NEK3-202ENST00000550841 TRMT1LQ7Z2T5 733 aaKnown RBP23.99■■□□□ 1.43
NEK3-202ENST00000550841 EXOC8Q8IYI6 725 aa23.99■■□□□ 1.43
NEK3-202ENST00000550841 NT5C3AQ9H0P0 336 aa23.99■■□□□ 1.43
NEK3-202ENST00000550841 CSRNP2Q9H175 543 aa23.99■■□□□ 1.43
NEK3-202ENST00000550841 KDM3AQ9Y4C1 1321 aa23.99■■□□□ 1.43
NEK3-202ENST00000550841 MED24O75448 989 aa23.98■■□□□ 1.43
NEK3-202ENST00000550841 CD4P01730 458 aa23.98■■□□□ 1.43
NEK3-202ENST00000550841 HOXC8P31273 242 aa23.98■■□□□ 1.43
NEK3-202ENST00000550841 YWHABP31946 246 aaKnown RBP23.98■■□□□ 1.43
NEK3-202ENST00000550841 TXLNAP40222 546 aa23.98■■□□□ 1.43
NEK3-202ENST00000550841 ME1P48163 572 aa23.98■■□□□ 1.43
NEK3-202ENST00000550841 CABP7Q86V35 215 aa23.98■■□□□ 1.43
NEK3-202ENST00000550841 LEO1Q8WVC0 666 aaPredicted RBP23.98■■□□□ 1.43
NEK3-202ENST00000550841 CALML4Q96GE6 196 aa23.98■■□□□ 1.43
NEK3-202ENST00000550841 CDK5RAP3Q96JB5 506 aa23.98■■□□□ 1.43
NEK3-202ENST00000550841 ANKEF1Q9NU02 776 aa23.98■■□□□ 1.43
NEK3-202ENST00000550841 SEPT9Q9UHD8 586 aaPredicted RBP23.98■■□□□ 1.43
NEK3-202ENST00000550841 MAGEB2O15479 319 aa23.97■■□□□ 1.43
NEK3-202ENST00000550841 B4GALT4O60513 344 aa23.97■■□□□ 1.43
NEK3-202ENST00000550841 STBD1O95210 358 aa23.97■■□□□ 1.43
NEK3-202ENST00000550841 CDC25AP30304 524 aa23.97■■□□□ 1.43
NEK3-202ENST00000550841 PPP1R13LQ8WUF5 828 aa23.97■■□□□ 1.43
NEK3-202ENST00000550841 LMBR1Q8WVP7 490 aa23.97■■□□□ 1.43
NEK3-202ENST00000550841 CLIC6Q96NY7 704 aa23.97■■□□□ 1.43
NEK3-202ENST00000550841 CCSER1Q9C0I3 900 aa23.97■■□□□ 1.43
NEK3-202ENST00000550841 TRPV6Q9H1D0 765 aa23.97■■□□□ 1.43
NEK3-202ENST00000550841 PP2D1A8MPX8 630 aa23.96■■□□□ 1.43
NEK3-202ENST00000550841 RPLP2P05387 115 aaKnown RBP23.96■■□□□ 1.43
NEK3-202ENST00000550841 CLTBP09497 229 aa23.96■■□□□ 1.43
NEK3-202ENST00000550841 IGBP1P78318 339 aa23.96■■□□□ 1.43
NEK3-202ENST00000550841 ADAM17P78536 824 aa23.96■■□□□ 1.43
NEK3-202ENST00000550841 GRIN1Q05586 938 aa23.96■■□□□ 1.43
NEK3-202ENST00000550841 PTK7Q13308 1070 aa23.96■■□□□ 1.43
NEK3-202ENST00000550841 HYIQ5T013 277 aa23.96■■□□□ 1.43
NEK3-202ENST00000550841 ANO5Q75V66 913 aa23.96■■□□□ 1.43
NEK3-202ENST00000550841 CCDC43Q96MW1 224 aaKnown RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms