RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 TSPY8P0CW00 308 aa13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 ACTN1P12814 892 aa13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 NQO1P15559 274 aaKnown RBP13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 DCAF17Q5H9S7 520 aaPredicted RBP13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 FAM26FQ5R3K3 315 aa13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 H2AFVQ71UI9 128 aa13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 LRRC4CQ9HCJ2 640 aa13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 ALDH5A1P51649 535 aaPredicted RBP13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 PMS2P54278 862 aa13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 CACNB1Q02641 598 aaPredicted RBP13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 ITIH4Q14624 930 aa13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 SLMAPQ14BN4 828 aa13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 TAF11Q15544 211 aa13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 CHADLQ6NUI6 762 aa13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 MAB21L3Q8N8X9 362 aa13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 U2AF1L4Q8WU68 220 aaKnown RBP13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 SYN2Q92777 582 aaPredicted RBP13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 SH3GL3Q99963 347 aa13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 CPSF2Q9P2I0 782 aaKnown RBP13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 AMFRQ9UKV5 643 aa13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 ZBTB1Q9Y2K1 713 aa13.97□□□□□ -0.17
SFSWAP-209ENST00000540469 ABCB11O95342 1321 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 MYH7BA7E2Y1 1941 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 MYBP10242 640 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 GNA11P29992 359 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 DR1Q01658 176 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 EBF2Q9HAK2 575 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 MLXIPLQ9NP71 852 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 KCNK9Q9NPC2 374 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 STK17AQ9UEE5 414 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 NOL4O94818 638 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 IL2RBP14784 551 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 SPTY2D1Q68D10 685 aaPredicted RBP13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 GALNT17Q6IS24 598 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 SYCE1Q8N0S2 351 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 CEP120Q8N960 986 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 ANKRD42Q8N9B4 389 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 PARD3BQ8TEW8 1205 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 LRRC27Q9C0I9 530 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 BARHL2Q9NY43 387 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 TMEM59LQ9UK28 342 aa13.96□□□□□ -0.17
SFSWAP-209ENST00000540469 ASAP2O43150 1006 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 SUN1O94901 812 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 ABCB4P21439 1286 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 EVA1CP58658 441 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 IFI35P80217 286 aaPredicted RBP13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 RBBP5Q15291 538 aaKnown RBP13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 HERC4Q5GLZ8 1057 aaPredicted RBP13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 MAEAQ7L5Y9 396 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 OTUD6AQ7L8S5 288 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 ZNF444Q8N0Y2 327 aaPredicted RBP13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 ZNF483Q8TF39 744 aaPredicted RBP13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 RASAL2Q9UJF2 1139 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 TIAM2Q8IVF5 1701 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 PDE6CP51160 858 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 GRB10Q13322 594 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 ADAM9Q13443 819 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 SPICE1Q8N0Z3 855 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 STMN4Q9H169 189 aaPredicted RBP13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 IRAK4Q9NWZ3 460 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 ZNF142P52746 1687 aaPredicted RBP13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 USP17L3A6NCW0 530 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 USP17L4A6NCW7 530 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 STXBP3O00186 592 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 MPHOSPH10O00566 681 aaKnown RBP13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 PCK1P35558 622 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 INHBEP58166 350 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 NUGGCQ68CJ6 796 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 TAOK1Q7L7X3 1001 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 USP17L1Q7RTZ2 530 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 PROM2Q8N271 834 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 SPDYE1Q8NFV5 336 aaPredicted RBP13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 UBA5Q9GZZ9 404 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 DCP1AQ9NPI6 582 aaPredicted RBP13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 MTRF1LQ9UGC7 380 aaKnown RBP13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 SLC12A4Q9UP95 1085 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 AGAP1Q9UPQ3 857 aa13.95□□□□□ -0.18
SFSWAP-209ENST00000540469 KLRF2D3W0D1 207 aa13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 CETN3O15182 167 aa13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 CCND1P24385 295 aa13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 ZNF211Q13398 564 aaPredicted RBP13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 SLC29A2Q14542 456 aa13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 ZNF571Q7Z3V5 609 aaPredicted RBP13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 REXO1Q8N1G1 1221 aaKnown RBP13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 TPCN2Q8NHX9 752 aa13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 GLG1Q92896 1179 aa13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 NLRP3Q96P20 1036 aa13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 MMTAG2Q9BU76 263 aaKnown RBP13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 FGFR1OP2Q9NVK5 253 aa13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 A8MUI8 341 aa13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 USP17L8P0C7I0 530 aa13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 ATP2A2P16615 1042 aaKnown RBP13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 KCNH2Q12809 1159 aa13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 COASYQ13057 564 aa13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 C10orf76Q5T2E6 689 aa13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 ERICH1Q86X53 443 aa13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 BLOC1S4Q9NUP1 217 aa13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 NAGPAQ9UK23 515 aa13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 NUP188Q5SRE5 1749 aa13.94□□□□□ -0.18
SFSWAP-209ENST00000540469 CES2O00748 559 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms