RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 CEP63Q96MT8 703 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 TLR10Q9BXR5 811 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 VAV3Q9UKW4 847 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 SCAF8Q9UPN6 1271 aaKnown RBP12.67□□□□□ -0.38
C11orf54-214ENST00000540113 FRMD3A2A2Y4 597 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 TBX3O15119 743 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 CETN3O15182 167 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 SLC26A4O43511 780 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 PALMO75781 387 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 HOXA7P31268 230 aaPredicted RBP12.67□□□□□ -0.38
C11orf54-214ENST00000540113 CIITAP33076 1130 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 GPS2Q13227 327 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 SPDYE2Q495Y8 402 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 TCERG1LQ5VWI1 586 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 HAUS3Q68CZ6 603 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 GJB7Q6PEY0 223 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 CCNI2Q6ZMN8 369 aaPredicted RBP12.67□□□□□ -0.38
C11orf54-214ENST00000540113 SYT2Q8N9I0 419 aaPredicted RBP12.67□□□□□ -0.38
C11orf54-214ENST00000540113 SPATA4Q8NEY3 305 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 IQCDQ96DY2 449 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 ALS2CR12Q96Q35 445 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 GOLPH3Q9H4A6 298 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 TMOD2Q9NZR1 351 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 AJAP1Q9UKB5 411 aaPredicted RBP12.67□□□□□ -0.38
C11orf54-214ENST00000540113 ZBTB21Q9ULJ3 1066 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 HPCAL4Q9UM19 191 aa12.67□□□□□ -0.38
C11orf54-214ENST00000540113 AKAP3O75969 853 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 FOSP01100 380 aaPredicted RBP12.66□□□□□ -0.38
C11orf54-214ENST00000540113 SERPING1P05155 500 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 KCNA3P22001 575 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 RPA1P27694 616 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 KLHL30Q0D2K2 578 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 GRIPAP1Q4V328 841 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 CCDC181Q5TID7 509 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 TPH2Q8IWU9 490 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 TTLL6Q8N841 843 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 EIF2AK1Q9BQI3 630 aaKnown RBP12.66□□□□□ -0.38
C11orf54-214ENST00000540113 SELENOOQ9BVL4 669 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 GANQ9H2C0 597 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 SYNPO2Q9UMS6 1093 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 TMX2Q9Y320 296 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 HYOU1Q9Y4L1 999 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 PJA2O43164 708 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 GCNT3O95395 438 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 SYF2O95926 243 aaKnown RBP12.66□□□□□ -0.38
C11orf54-214ENST00000540113 STAT2P52630 851 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 DLGAP5Q15398 846 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 KNOP1Q1ED39 458 aaKnown RBP12.66□□□□□ -0.38
C11orf54-214ENST00000540113 ZC2HC1CQ53FD0 456 aaPredicted RBP12.66□□□□□ -0.38
C11orf54-214ENST00000540113 HSP90B2PQ58FF3 399 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 MCTP2Q6DN12 878 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 LARGE2Q8N3Y3 721 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 ERMNQ8TAM6 284 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 NOX5Q96PH1 765 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 PSMD1Q99460 953 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 WDR18Q9BV38 432 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 TMEM39BQ9GZU3 492 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 ARHGEF10LQ9HCE6 1279 aa12.66□□□□□ -0.38
C11orf54-214ENST00000540113 RBM12Q9NTZ6 932 aaKnown RBP12.66□□□□□ -0.38
C11orf54-214ENST00000540113 IGLV3-22A0A075B6J6 115 aa12.65□□□□□ -0.38
C11orf54-214ENST00000540113 SSU72P8A0A1W2PR75 194 aa12.65□□□□□ -0.38
C11orf54-214ENST00000540113 CCDC66A2RUB6 948 aa12.65□□□□□ -0.38
C11orf54-214ENST00000540113 PIK3CDO00329 1044 aa12.65□□□□□ -0.38
C11orf54-214ENST00000540113 CYP3A4P08684 503 aa12.65□□□□□ -0.38
C11orf54-214ENST00000540113 DPEP1P16444 411 aa12.65□□□□□ -0.38
C11orf54-214ENST00000540113 NMT1P30419 496 aaKnown RBP12.65□□□□□ -0.38
C11orf54-214ENST00000540113 ASIC2Q16515 512 aa12.65□□□□□ -0.38
C11orf54-214ENST00000540113 RPGRIP1Q96KN7 1286 aa12.65□□□□□ -0.38
C11orf54-214ENST00000540113 PCDHB13Q9Y5F0 798 aa12.65□□□□□ -0.38
C11orf54-214ENST00000540113 A0A0U1RQG5 324 aaPredicted RBP12.64□□□□□ -0.39
C11orf54-214ENST00000540113 TARSL2A2RTX5 802 aaKnown RBP12.64□□□□□ -0.39
C11orf54-214ENST00000540113 ZSCAN5CA6NGD5 496 aaPredicted RBP12.64□□□□□ -0.39
C11orf54-214ENST00000540113 RNF40O75150 1001 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 GGCXP38435 758 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 COG2Q14746 738 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 KIAA0753Q2KHM9 967 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 MIGA2Q7L4E1 593 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 DYDC2Q96IM9 177 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 GLIS2Q9BZE0 524 aaPredicted RBP12.64□□□□□ -0.39
C11orf54-214ENST00000540113 FAM204AQ9H8W3 233 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 VEZTQ9HBM0 779 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 PKD2L1Q9P0L9 805 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 ARMCX3Q9UH62 379 aaPredicted RBP12.64□□□□□ -0.39
C11orf54-214ENST00000540113 RABGAP1Q9Y3P9 1069 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 ASTN1O14525 1302 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 PITPNM2Q9BZ72 1349 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 ZC3H4Q9UPT8 1303 aaKnown RBP12.64□□□□□ -0.39
C11orf54-214ENST00000540113 GNA14O95837 355 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 MARSP56192 900 aaKnown RBP12.64□□□□□ -0.39
C11orf54-214ENST00000540113 PTK2Q05397 1052 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 DPY19L2P1Q6NXN4 242 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 SND1Q7KZF4 910 aaKnown RBP eCLIP12.64□□□□□ -0.39
C11orf54-214ENST00000540113 EPM2AIP1Q7L775 607 aaPredicted RBP12.64□□□□□ -0.39
C11orf54-214ENST00000540113 ZNF571Q7Z3V5 609 aaPredicted RBP12.64□□□□□ -0.39
C11orf54-214ENST00000540113 ZC3H3Q8IXZ2 948 aaKnown RBP12.64□□□□□ -0.39
C11orf54-214ENST00000540113 RTKN2Q8IZC4 609 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 TXLNBQ8N3L3 684 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 PROCA1Q8NCQ7 364 aaPredicted RBP12.64□□□□□ -0.39
C11orf54-214ENST00000540113 EXOC4Q96A65 974 aa12.64□□□□□ -0.39
C11orf54-214ENST00000540113 FAM20AQ96MK3 541 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms