RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 DDX20Q9UHI6 824 aaKnown RBP13.79□□□□□ -0.2
DDX55-206ENST00000539934 CARD8Q9Y2G2 431 aa13.79□□□□□ -0.2
DDX55-206ENST00000539934 LINC00854A0A1B0GVQ3 168 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 FRMD3A2A2Y4 597 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 SPTLC2O15270 562 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 CYP2D6P10635 497 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 BTDP43251 543 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 CEBPZQ03701 1054 aaKnown RBP13.78□□□□□ -0.2
DDX55-206ENST00000539934 BIRC3Q13489 604 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 SLC9C1Q4G0N8 1177 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 SH2D4BQ5SQS7 431 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 ZCCHC8Q6NZY4 707 aaKnown RBP13.78□□□□□ -0.2
DDX55-206ENST00000539934 ZNF654Q8IZM8 581 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 KIAA1958Q8N8K9 716 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 KRI1Q8N9T8 703 aaKnown RBP13.78□□□□□ -0.2
DDX55-206ENST00000539934 PRMT6Q96LA8 375 aaPredicted RBP13.78□□□□□ -0.2
DDX55-206ENST00000539934 ALG1Q9BT22 464 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 TIMM22Q9Y584 194 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 MYH6P13533 1939 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 NID2Q14112 1375 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 ANKRD65E5RJM6 399 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 NPM3O75607 178 aaKnown RBP13.78□□□□□ -0.2
DDX55-206ENST00000539934 PDGFRBP09619 1106 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 ENDOUP21128 410 aaKnown RBP13.78□□□□□ -0.2
DDX55-206ENST00000539934 GBP2P32456 591 aaPredicted RBP13.78□□□□□ -0.2
DDX55-206ENST00000539934 EVX2Q03828 476 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 SSRP1Q08945 709 aaKnown RBP13.78□□□□□ -0.2
DDX55-206ENST00000539934 SEC23AQ15436 765 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 NTRK3Q16288 839 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 BOLA3Q53S33 107 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 CEP85LQ5SZL2 805 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 IFIT1BQ5T764 474 aaKnown RBP13.78□□□□□ -0.2
DDX55-206ENST00000539934 TGFBRAP1Q8WUH2 860 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 ARMC5Q96C12 935 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 ZMAT2Q96NC0 199 aaKnown RBP13.78□□□□□ -0.2
DDX55-206ENST00000539934 SLC26A6Q9BXS9 759 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 ARHGAP39Q9C0H5 1083 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 L2HGDHQ9H9P8 463 aa13.78□□□□□ -0.2
DDX55-206ENST00000539934 FAM217BQ9NTX9 383 aaPredicted RBP13.78□□□□□ -0.2
DDX55-206ENST00000539934 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
DDX55-206ENST00000539934 FAM205AQ6ZU69 1335 aa13.77□□□□□ -0.2
DDX55-206ENST00000539934 ORC4O43929 436 aa13.77□□□□□ -0.21
DDX55-206ENST00000539934 ZBTB48P10074 688 aaPredicted RBP13.77□□□□□ -0.21
DDX55-206ENST00000539934 TCF3P15923 654 aa13.77□□□□□ -0.21
DDX55-206ENST00000539934 RCAN1P53805 252 aa13.77□□□□□ -0.21
DDX55-206ENST00000539934 TUBA1BP68363 451 aa13.77□□□□□ -0.21
DDX55-206ENST00000539934 CBX3Q13185 183 aa13.77□□□□□ -0.21
DDX55-206ENST00000539934 MUM1Q2TAK8 710 aa13.77□□□□□ -0.21
DDX55-206ENST00000539934 PABPC1LQ4VXU2 614 aaKnown RBP13.77□□□□□ -0.21
DDX55-206ENST00000539934 TUBA1AQ71U36 451 aa13.77□□□□□ -0.21
DDX55-206ENST00000539934 ENAHQ8N8S7 591 aaPredicted RBP13.77□□□□□ -0.21
DDX55-206ENST00000539934 SUN5Q8TC36 379 aa13.77□□□□□ -0.21
DDX55-206ENST00000539934 FAM200AQ8TCP9 573 aa13.77□□□□□ -0.21
DDX55-206ENST00000539934 HVCN1Q96D96 273 aa13.77□□□□□ -0.21
DDX55-206ENST00000539934 ZBED3Q96IU2 234 aaPredicted RBP13.77□□□□□ -0.21
DDX55-206ENST00000539934 ZNF333Q96JL9 665 aa13.77□□□□□ -0.21
DDX55-206ENST00000539934 CDHR1Q96JP9 859 aa13.77□□□□□ -0.21
DDX55-206ENST00000539934 TSC22D3Q99576 134 aa13.77□□□□□ -0.21
DDX55-206ENST00000539934 GJB4Q9NTQ9 266 aa13.77□□□□□ -0.21
DDX55-206ENST00000539934 MYO3BQ8WXR4 1341 aa13.77□□□□□ -0.21
DDX55-206ENST00000539934 GOLGA6L10A0A0M3HER8 536 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 TARSL2A2RTX5 802 aaKnown RBP13.76□□□□□ -0.21
DDX55-206ENST00000539934 B4DLN1 442 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 CLASP2O75122 1294 aaKnown RBP13.76□□□□□ -0.21
DDX55-206ENST00000539934 USP2O75604 605 aaPredicted RBP13.76□□□□□ -0.21
DDX55-206ENST00000539934 SLC8A1P32418 973 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 PPIDQ08752 370 aaKnown RBP13.76□□□□□ -0.21
DDX55-206ENST00000539934 KCTD2Q14681 263 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 USH1GQ495M9 461 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 ATL3Q6DD88 541 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 TRIM22Q8IYM9 498 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 OPTNQ96CV9 577 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 NAF1Q96HR8 494 aaKnown RBP13.76□□□□□ -0.21
DDX55-206ENST00000539934 AIFM3Q96NN9 605 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.76□□□□□ -0.21
DDX55-206ENST00000539934 SEPT10Q9P0V9 454 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 SQORQ9Y6N5 450 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 ZSWIM8A7E2V4 1837 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 STK36Q9NRP7 1315 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 GPR75-ASB3A0A0A6YYF3 556 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 TSPY2A6NKD2 308 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 PLCG2P16885 1265 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 IFNAR1P17181 557 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 KIF11P52732 1056 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 MAP7D1Q3KQU3 841 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 CFAP100Q494V2 611 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 C12orf60Q5U649 245 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 FAM117BQ6P1L5 589 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 MAPKAPK5Q8IW41 473 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 FANCBQ8NB91 859 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 ERP27Q96DN0 273 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 USP28Q96RU2 1077 aa13.76□□□□□ -0.21
DDX55-206ENST00000539934 MYH1P12882 1939 aa13.75□□□□□ -0.21
DDX55-206ENST00000539934 POLR3DP05423 398 aaPredicted RBP13.75□□□□□ -0.21
DDX55-206ENST00000539934 TROVE2P10155 538 aaKnown RBP eCLIP13.75□□□□□ -0.21
DDX55-206ENST00000539934 S100A5P33763 92 aa13.75□□□□□ -0.21
DDX55-206ENST00000539934 PIK3CAP42336 1068 aa13.75□□□□□ -0.21
DDX55-206ENST00000539934 PLCB4Q15147 1175 aa13.75□□□□□ -0.21
DDX55-206ENST00000539934 INAQ16352 499 aa13.75□□□□□ -0.21
DDX55-206ENST00000539934 FAM47AQ5JRC9 791 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms