RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 CDC6Q99741 560 aa8.18□□□□□ -1.1
CCDC7-209ENST00000539197 IGSF5Q9NSI5 407 aa8.18□□□□□ -1.1
CCDC7-209ENST00000539197 OAZ3Q9UMX2 235 aa8.18□□□□□ -1.1
CCDC7-209ENST00000539197 WNT9AO14904 365 aa8.17□□□□□ -1.1
CCDC7-209ENST00000539197 FAM153BP0C7A2 387 aa8.17□□□□□ -1.1
CCDC7-209ENST00000539197 CR2P20023 1033 aa8.17□□□□□ -1.1
CCDC7-209ENST00000539197 GJA4P35212 333 aa8.17□□□□□ -1.1
CCDC7-209ENST00000539197 GUCY1A3Q02108 690 aa8.17□□□□□ -1.1
CCDC7-209ENST00000539197 SSRP1Q08945 709 aaKnown RBP8.17□□□□□ -1.1
CCDC7-209ENST00000539197 FOXE3Q13461 319 aa8.17□□□□□ -1.1
CCDC7-209ENST00000539197 NRN1LQ496H8 165 aa8.17□□□□□ -1.1
CCDC7-209ENST00000539197 MTERF2Q49AM1 385 aa8.17□□□□□ -1.1
CCDC7-209ENST00000539197 FSTL4Q6MZW2 842 aa8.17□□□□□ -1.1
CCDC7-209ENST00000539197 RNF207Q6ZRF8 634 aa8.17□□□□□ -1.1
CCDC7-209ENST00000539197 LARP4Q71RC2 724 aaKnown RBP eCLIP8.17□□□□□ -1.1
CCDC7-209ENST00000539197 MENTQ9BUN1 341 aa8.17□□□□□ -1.1
CCDC7-209ENST00000539197 KIAA1683Q9H0B3 1180 aa8.17□□□□□ -1.1
CCDC7-209ENST00000539197 SLITRK6Q9H5Y7 841 aa8.17□□□□□ -1.1
CCDC7-209ENST00000539197 SMURF1Q9HCE7 757 aa8.17□□□□□ -1.1
CCDC7-209ENST00000539197 CDC42EP3Q9UKI2 254 aa8.17□□□□□ -1.1
CCDC7-209ENST00000539197 ATP23Q9Y6H3 246 aa8.17□□□□□ -1.1
CCDC7-209ENST00000539197 NPIPB8E9PQR5 432 aa8.16□□□□□ -1.1
CCDC7-209ENST00000539197 ARVCFO00192 962 aa8.16□□□□□ -1.1
CCDC7-209ENST00000539197 RAD17O75943 681 aa8.16□□□□□ -1.1
CCDC7-209ENST00000539197 C4BPAP04003 597 aaKnown RBP8.16□□□□□ -1.1
CCDC7-209ENST00000539197 ETV4P43268 484 aa8.16□□□□□ -1.1
CCDC7-209ENST00000539197 KCNQ1P51787 676 aa8.16□□□□□ -1.1
CCDC7-209ENST00000539197 LRSAM1Q6UWE0 723 aa8.16□□□□□ -1.1
CCDC7-209ENST00000539197 Q6ZSN1 163 aa8.16□□□□□ -1.1
CCDC7-209ENST00000539197 EXTL1Q92935 676 aa8.16□□□□□ -1.1
CCDC7-209ENST00000539197 BTBD7Q9P203 1132 aa8.16□□□□□ -1.1
CCDC7-209ENST00000539197 CCDC9Q9Y3X0 531 aaKnown RBP8.16□□□□□ -1.1
CCDC7-209ENST00000539197 NR2E1Q9Y466 385 aa8.16□□□□□ -1.1
CCDC7-209ENST00000539197 PRAMEF25A6NGN4 478 aa8.15□□□□□ -1.1
CCDC7-209ENST00000539197 ZNF561-AS1K7EIQ3 104 aa8.15□□□□□ -1.1
CCDC7-209ENST00000539197 STK10O94804 968 aaKnown RBP8.15□□□□□ -1.1
CCDC7-209ENST00000539197 PTGS1P23219 599 aa8.15□□□□□ -1.1
CCDC7-209ENST00000539197 DNM2P50570 870 aa8.15□□□□□ -1.1
CCDC7-209ENST00000539197 TM4SF20Q53R12 229 aa8.15□□□□□ -1.1
CCDC7-209ENST00000539197 FIGNQ5HY92 759 aa8.15□□□□□ -1.1
CCDC7-209ENST00000539197 ZBTB38Q8NAP3 1195 aaPredicted RBP8.15□□□□□ -1.1
CCDC7-209ENST00000539197 IPO9Q96P70 1041 aaKnown RBP8.15□□□□□ -1.1
CCDC7-209ENST00000539197 INCENPQ9NQS7 918 aa8.15□□□□□ -1.1
CCDC7-209ENST00000539197 FBXO10Q9UK96 956 aa8.15□□□□□ -1.1
CCDC7-209ENST00000539197 CCDC66A2RUB6 948 aa8.14□□□□□ -1.11
CCDC7-209ENST00000539197 U2SURPO15042 1029 aaKnown RBP8.14□□□□□ -1.11
CCDC7-209ENST00000539197 CDC14BO60729 498 aa8.14□□□□□ -1.11
CCDC7-209ENST00000539197 CRTAMO95727 393 aa8.14□□□□□ -1.11
CCDC7-209ENST00000539197 MPIG6BO95866 241 aa8.14□□□□□ -1.11
CCDC7-209ENST00000539197 NAT1P18440 290 aa8.14□□□□□ -1.11
CCDC7-209ENST00000539197 ACO1P21399 889 aaKnown RBP8.14□□□□□ -1.11
CCDC7-209ENST00000539197 AOAHP28039 575 aa8.14□□□□□ -1.11
CCDC7-209ENST00000539197 SUMO1P63165 101 aaKnown RBP8.14□□□□□ -1.11
CCDC7-209ENST00000539197 ST5P78524 1137 aa8.14□□□□□ -1.11
CCDC7-209ENST00000539197 DGCR2P98153 550 aa8.14□□□□□ -1.11
CCDC7-209ENST00000539197 DUSP8Q13202 625 aa8.14□□□□□ -1.11
CCDC7-209ENST00000539197 USP39Q53GS9 565 aaKnown RBP8.14□□□□□ -1.11
CCDC7-209ENST00000539197 MIIPQ5JXC2 388 aa8.14□□□□□ -1.11
CCDC7-209ENST00000539197 C16orf59Q7L2K0 433 aa8.14□□□□□ -1.11
CCDC7-209ENST00000539197 CXXC5Q7LFL8 322 aaKnown RBP8.14□□□□□ -1.11
CCDC7-209ENST00000539197 POLNQ7Z5Q5 900 aa8.14□□□□□ -1.11
CCDC7-209ENST00000539197 CKAP2LQ8IYA6 745 aa8.14□□□□□ -1.11
CCDC7-209ENST00000539197 OR14A2Q96R54 314 aa8.14□□□□□ -1.11
CCDC7-209ENST00000539197 AMNQ9BXJ7 453 aa8.14□□□□□ -1.11
CCDC7-209ENST00000539197 ZDHHC5Q9C0B5 715 aa8.14□□□□□ -1.11
CCDC7-209ENST00000539197 GALNT8Q9NY28 637 aa8.14□□□□□ -1.11
CCDC7-209ENST00000539197 OVOL3O00110 214 aa8.13□□□□□ -1.11
CCDC7-209ENST00000539197 HMGCRP04035 888 aa8.13□□□□□ -1.11
CCDC7-209ENST00000539197 RASGRF1Q13972 1273 aa8.13□□□□□ -1.11
CCDC7-209ENST00000539197 CRY1Q16526 586 aa8.13□□□□□ -1.11
CCDC7-209ENST00000539197 CISD2Q8N5K1 135 aaKnown RBP8.13□□□□□ -1.11
CCDC7-209ENST00000539197 ZNF503Q96F45 646 aa8.13□□□□□ -1.11
CCDC7-209ENST00000539197 C12orf65Q9H3J6 166 aaKnown RBP8.13□□□□□ -1.11
CCDC7-209ENST00000539197 UCKL1Q9NWZ5 548 aa8.13□□□□□ -1.11
CCDC7-209ENST00000539197 SLC30A1Q9Y6M5 507 aa8.13□□□□□ -1.11
CCDC7-209ENST00000539197 GSTA4O15217 222 aa8.12□□□□□ -1.11
CCDC7-209ENST00000539197 CD83Q01151 205 aa8.12□□□□□ -1.11
CCDC7-209ENST00000539197 CFHR4Q92496 578 aa8.12□□□□□ -1.11
CCDC7-209ENST00000539197 FAM89AQ96GI7 184 aa8.12□□□□□ -1.11
CCDC7-209ENST00000539197 PLA2G12BQ9BX93 195 aa8.12□□□□□ -1.11
CCDC7-209ENST00000539197 CSRNP2Q9H175 543 aa8.12□□□□□ -1.11
CCDC7-209ENST00000539197 ARHGAP6O43182 974 aa8.11□□□□□ -1.11
CCDC7-209ENST00000539197 MMEP08473 750 aa8.11□□□□□ -1.11
CCDC7-209ENST00000539197 NFYCQ13952 458 aa8.11□□□□□ -1.11
CCDC7-209ENST00000539197 FAM47CQ5HY64 1035 aa8.11□□□□□ -1.11
CCDC7-209ENST00000539197 ZC3H7AQ8IWR0 971 aaKnown RBP8.11□□□□□ -1.11
CCDC7-209ENST00000539197 WDR48Q8TAF3 677 aa8.11□□□□□ -1.11
CCDC7-209ENST00000539197 CCDC113Q9H0I3 377 aa8.11□□□□□ -1.11
CCDC7-209ENST00000539197 PUF60Q9UHX1 559 aaKnown RBP8.11□□□□□ -1.11
CCDC7-209ENST00000539197 RPS19P39019 145 aaKnown RBP8.1□□□□□ -1.11
CCDC7-209ENST00000539197 HERVK_113P62684 666 aa8.1□□□□□ -1.11
CCDC7-209ENST00000539197 ABHD18Q0P651 414 aa8.1□□□□□ -1.11
CCDC7-209ENST00000539197 STILQ15468 1287 aa8.1□□□□□ -1.11
CCDC7-209ENST00000539197 NAALADL2Q58DX5 795 aa8.1□□□□□ -1.11
CCDC7-209ENST00000539197 WNK4Q96J92 1243 aa8.1□□□□□ -1.11
CCDC7-209ENST00000539197 DHRS4Q9BTZ2 278 aa8.1□□□□□ -1.11
CCDC7-209ENST00000539197 SLC52A2Q9HAB3 445 aa8.1□□□□□ -1.11
CCDC7-209ENST00000539197 PPP1R1BQ9UD71 204 aaPredicted RBP8.1□□□□□ -1.11
CCDC7-209ENST00000539197 COQ6Q9Y2Z9 468 aa8.1□□□□□ -1.11
CCDC7-209ENST00000539197 MRPS23Q9Y3D9 190 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms