RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 KLHL33A6NCF5 533 aa19.64■□□□□ 0.73
RAB40C-203ENST00000535977 LRRC53A6NM62 1247 aa19.64■□□□□ 0.73
RAB40C-203ENST00000535977 EN1Q05925 392 aaPredicted RBP19.64■□□□□ 0.73
RAB40C-203ENST00000535977 LRRC41Q15345 812 aa19.64■□□□□ 0.73
RAB40C-203ENST00000535977 ZC3H3Q8IXZ2 948 aaKnown RBP19.64■□□□□ 0.73
RAB40C-203ENST00000535977 SH2D3CQ8N5H7 860 aa19.64■□□□□ 0.73
RAB40C-203ENST00000535977 RNF10Q8N5U6 811 aaKnown RBP19.64■□□□□ 0.73
RAB40C-203ENST00000535977 CCDC155Q8N6L0 562 aa19.64■□□□□ 0.73
RAB40C-203ENST00000535977 CRYGNQ8WXF5 182 aa19.64■□□□□ 0.73
RAB40C-203ENST00000535977 MEIS2O14770 477 aa19.64■□□□□ 0.73
RAB40C-203ENST00000535977 ZNF263O14978 683 aa19.64■□□□□ 0.73
RAB40C-203ENST00000535977 CYP11B2P19099 503 aa19.64■□□□□ 0.73
RAB40C-203ENST00000535977 ICA1Q05084 483 aa19.64■□□□□ 0.73
RAB40C-203ENST00000535977 GRIK3Q13003 919 aa19.64■□□□□ 0.73
RAB40C-203ENST00000535977 HERC4Q5GLZ8 1057 aaPredicted RBP19.64■□□□□ 0.73
RAB40C-203ENST00000535977 ZFPM1Q8IX07 1006 aa19.64■□□□□ 0.73
RAB40C-203ENST00000535977 CAGE1Q8TC20 777 aa19.64■□□□□ 0.73
RAB40C-203ENST00000535977 JADE2Q9NQC1 790 aa19.64■□□□□ 0.73
RAB40C-203ENST00000535977 MACROD2A1Z1Q3 448 aa19.63■□□□□ 0.73
RAB40C-203ENST00000535977 A6NNZ2 444 aa19.63■□□□□ 0.73
RAB40C-203ENST00000535977 SKAP2O75563 359 aaPredicted RBP19.63■□□□□ 0.73
RAB40C-203ENST00000535977 EPB41P11171 864 aaKnown RBP19.63■□□□□ 0.73
RAB40C-203ENST00000535977 ARHGAP4P98171 946 aa19.63■□□□□ 0.73
RAB40C-203ENST00000535977 TUBB8Q3ZCM7 444 aa19.63■□□□□ 0.73
RAB40C-203ENST00000535977 SLC9C1Q4G0N8 1177 aa19.63■□□□□ 0.73
RAB40C-203ENST00000535977 TLDC1Q6P9B6 456 aa19.63■□□□□ 0.73
RAB40C-203ENST00000535977 ZNF572Q7Z3I7 529 aaPredicted RBP19.63■□□□□ 0.73
RAB40C-203ENST00000535977 FBXO11Q86XK2 927 aa19.63■□□□□ 0.73
RAB40C-203ENST00000535977 PARP9Q8IXQ6 854 aa19.63■□□□□ 0.73
RAB40C-203ENST00000535977 ZNF473Q8WTR7 871 aaKnown RBP19.63■□□□□ 0.73
RAB40C-203ENST00000535977 EMILIN3Q9NT22 766 aa19.63■□□□□ 0.73
RAB40C-203ENST00000535977 FAM198AQ9UFP1 575 aa19.63■□□□□ 0.73
RAB40C-203ENST00000535977 SNX12Q9UMY4 172 aa19.63■□□□□ 0.73
RAB40C-203ENST00000535977 E9PMD0 336 aa19.63■□□□□ 0.73
RAB40C-203ENST00000535977 PDE2AO00408 941 aaPredicted RBP19.63■□□□□ 0.73
RAB40C-203ENST00000535977 TCP1P17987 556 aaKnown RBP19.63■□□□□ 0.73
RAB40C-203ENST00000535977 LSP1P33241 339 aa19.63■□□□□ 0.73
RAB40C-203ENST00000535977 IFT88Q13099 833 aa19.63■□□□□ 0.73
RAB40C-203ENST00000535977 COL23A1Q86Y22 540 aaPredicted RBP19.63■□□□□ 0.73
RAB40C-203ENST00000535977 EPN3Q9H201 632 aa19.63■□□□□ 0.73
RAB40C-203ENST00000535977 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.63■□□□□ 0.73
RAB40C-203ENST00000535977 RBAK-RBAKDNI3L0D1 243 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 EPHB6O15197 1021 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 SERPING1P05155 500 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 KRT18P05783 430 aaKnown RBP19.62■□□□□ 0.73
RAB40C-203ENST00000535977 MAGEA1P43355 309 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 C2orf54Q08AI8 447 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 E2F5Q15329 346 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 ASTE1Q2TB18 679 aaPredicted RBP19.62■□□□□ 0.73
RAB40C-203ENST00000535977 DACT2Q5SW24 774 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 TRIM59Q8IWR1 403 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 AKT1S1Q96B36 256 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 TFR2Q9UP52 801 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 DNM3Q9UQ16 869 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 DDTLA6NHG4 134 aaPredicted RBP19.62■□□□□ 0.73
RAB40C-203ENST00000535977 F5H6K3 240 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 PLSCR1O15162 318 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 NKRFO15226 690 aaKnown RBP eCLIP19.62■□□□□ 0.73
RAB40C-203ENST00000535977 ENTPD3O75355 529 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 EZRP15311 586 aaKnown RBP19.62■□□□□ 0.73
RAB40C-203ENST00000535977 RPA1P27694 616 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 CIITAP33076 1130 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 RBM5P52756 815 aaKnown RBP eCLIP19.62■□□□□ 0.73
RAB40C-203ENST00000535977 SLC12A3P55017 1021 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 KLRC3Q07444 240 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 KCNMA1Q12791 1236 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 NAA25Q14CX7 972 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 ABCB5Q2M3G0 1257 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 SFMBT2Q5VUG0 894 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 KCTD16Q68DU8 428 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 STYK1Q6J9G0 422 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 TSEN2Q8NCE0 465 aaKnown RBP19.62■□□□□ 0.73
RAB40C-203ENST00000535977 ETNPPLQ8TBG4 499 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 SCLT1Q96NL6 688 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 KCTD10Q9H3F6 313 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 DBNDD1Q9H9R9 158 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 TSKSQ9UJT2 592 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 DUSP10Q9Y6W6 482 aa19.62■□□□□ 0.73
RAB40C-203ENST00000535977 POTEB3A0JP26 581 aa19.61■□□□□ 0.73
RAB40C-203ENST00000535977 SPDYE3A6NKU9 549 aa19.61■□□□□ 0.73
RAB40C-203ENST00000535977 POTECB2RU33 542 aa19.61■□□□□ 0.73
RAB40C-203ENST00000535977 CETN3O15182 167 aa19.61■□□□□ 0.73
RAB40C-203ENST00000535977 ZNF185O15231 689 aa19.61■□□□□ 0.73
RAB40C-203ENST00000535977 RAD21O60216 631 aa19.61■□□□□ 0.73
RAB40C-203ENST00000535977 PLEKP08567 350 aaPredicted RBP19.61■□□□□ 0.73
RAB40C-203ENST00000535977 SREBF1P36956 1147 aa19.61■□□□□ 0.73
RAB40C-203ENST00000535977 GUCY1A3Q02108 690 aa19.61■□□□□ 0.73
RAB40C-203ENST00000535977 POTEBQ6S5H4 581 aa19.61■□□□□ 0.73
RAB40C-203ENST00000535977 KIAA0825Q8IV33 1275 aa19.61■□□□□ 0.73
RAB40C-203ENST00000535977 ZNF483Q8TF39 744 aaPredicted RBP19.61■□□□□ 0.73
RAB40C-203ENST00000535977 ARFGEF1Q9Y6D6 1849 aa19.61■□□□□ 0.73
RAB40C-203ENST00000535977 TCP10Q12799 353 aa19.61■□□□□ 0.73
RAB40C-203ENST00000535977 ZKSCAN8Q15776 578 aaPredicted RBP19.61■□□□□ 0.73
RAB40C-203ENST00000535977 SYDE2Q5VT97 1194 aa19.61■□□□□ 0.73
RAB40C-203ENST00000535977 CYB5D1Q6P9G0 228 aa19.61■□□□□ 0.73
RAB40C-203ENST00000535977 BTNL9Q6UXG8 535 aa19.61■□□□□ 0.73
RAB40C-203ENST00000535977 KRT26Q7Z3Y9 468 aa19.61■□□□□ 0.73
RAB40C-203ENST00000535977 SYT2Q8N9I0 419 aaPredicted RBP19.61■□□□□ 0.73
RAB40C-203ENST00000535977 GLIS3Q8NEA6 775 aa19.61■□□□□ 0.73
RAB40C-203ENST00000535977 RNPC3Q96LT9 517 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms