RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 ACTN4O43707 911 aaKnown RBP12.46□□□□□ -0.42
CCDC84-205ENST00000528088 CLTBP09497 229 aa12.46□□□□□ -0.42
CCDC84-205ENST00000528088 FAM86B2P0C5J1 330 aa12.46□□□□□ -0.42
CCDC84-205ENST00000528088 ARP10275 920 aa12.46□□□□□ -0.42
CCDC84-205ENST00000528088 NKX3-2P78367 333 aa12.46□□□□□ -0.42
CCDC84-205ENST00000528088 ARHGAP1Q07960 439 aa12.46□□□□□ -0.42
CCDC84-205ENST00000528088 FAAP100Q0VG06 881 aa12.46□□□□□ -0.42
CCDC84-205ENST00000528088 LRIT3Q3SXY7 679 aa12.46□□□□□ -0.42
CCDC84-205ENST00000528088 C9orf50Q5SZB4 431 aa12.46□□□□□ -0.42
CCDC84-205ENST00000528088 CELF3Q5SZQ8 465 aaKnown RBP12.46□□□□□ -0.42
CCDC84-205ENST00000528088 NAP1L4Q99733 375 aaKnown RBP12.46□□□□□ -0.42
CCDC84-205ENST00000528088 FOXP1Q9H334 677 aaPredicted RBP12.46□□□□□ -0.42
CCDC84-205ENST00000528088 DDX25Q9UHL0 483 aaKnown RBP12.46□□□□□ -0.42
CCDC84-205ENST00000528088 MEIS1O00470 390 aa12.45□□□□□ -0.42
CCDC84-205ENST00000528088 CDK7P50613 346 aa12.45□□□□□ -0.42
CCDC84-205ENST00000528088 EPHB4P54760 987 aa12.45□□□□□ -0.42
CCDC84-205ENST00000528088 SP2Q02086 613 aa12.45□□□□□ -0.42
CCDC84-205ENST00000528088 SEMA3FQ13275 785 aa12.45□□□□□ -0.42
CCDC84-205ENST00000528088 SHHQ15465 462 aa12.45□□□□□ -0.42
CCDC84-205ENST00000528088 EARS2Q5JPH6 523 aaKnown RBP12.45□□□□□ -0.42
CCDC84-205ENST00000528088 CXCL17Q6UXB2 119 aa12.45□□□□□ -0.42
CCDC84-205ENST00000528088 Q7L0L9 218 aa12.45□□□□□ -0.42
CCDC84-205ENST00000528088 NIPA1Q7RTP0 329 aa12.45□□□□□ -0.42
CCDC84-205ENST00000528088 ANKRD33Q7Z3H0 272 aa12.45□□□□□ -0.42
CCDC84-205ENST00000528088 NOSTRINQ8IVI9 506 aa12.45□□□□□ -0.42
CCDC84-205ENST00000528088 GLT1D1Q96MS3 346 aa12.45□□□□□ -0.42
CCDC84-205ENST00000528088 AGO4Q9HCK5 861 aaKnown RBP12.45□□□□□ -0.42
CCDC84-205ENST00000528088 JPH1Q9HDC5 661 aaPredicted RBP12.45□□□□□ -0.42
CCDC84-205ENST00000528088 LTBP2Q14767 1821 aa12.44□□□□□ -0.42
CCDC84-205ENST00000528088 IPO5O00410 1097 aaKnown RBP12.44□□□□□ -0.42
CCDC84-205ENST00000528088 KIAA0355O15063 1070 aa12.44□□□□□ -0.42
CCDC84-205ENST00000528088 ATP9AO75110 1047 aa12.44□□□□□ -0.42
CCDC84-205ENST00000528088 MMP3P08254 477 aa12.44□□□□□ -0.42
CCDC84-205ENST00000528088 GCFC2P16383 781 aaKnown RBP12.44□□□□□ -0.42
CCDC84-205ENST00000528088 KCNA2P16389 499 aa12.44□□□□□ -0.42
CCDC84-205ENST00000528088 CIITAP33076 1130 aa12.44□□□□□ -0.42
CCDC84-205ENST00000528088 ANP32AP39687 249 aaKnown RBP12.44□□□□□ -0.42
CCDC84-205ENST00000528088 DGKDQ16760 1214 aa12.44□□□□□ -0.42
CCDC84-205ENST00000528088 UTP14CQ5TAP6 766 aaKnown RBP12.44□□□□□ -0.42
CCDC84-205ENST00000528088 DESI1Q6ICB0 168 aa12.44□□□□□ -0.42
CCDC84-205ENST00000528088 METTL7BQ6UX53 244 aa12.44□□□□□ -0.42
CCDC84-205ENST00000528088 CRYGNQ8WXF5 182 aa12.44□□□□□ -0.42
CCDC84-205ENST00000528088 SENP7Q9BQF6 1050 aa12.44□□□□□ -0.42
CCDC84-205ENST00000528088 TMEM39AQ9NV64 488 aa12.44□□□□□ -0.42
CCDC84-205ENST00000528088 GRIN2DO15399 1336 aa12.44□□□□□ -0.42
CCDC84-205ENST00000528088 ELP1O95163 1332 aa12.44□□□□□ -0.42
CCDC84-205ENST00000528088 IGLV3-22A0A075B6J6 115 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 KIF28PB7ZC32 967 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 ARVCFO00192 962 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 KPNA6O60684 536 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 GAS7O60861 476 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 BAG4O95429 457 aaKnown RBP12.43□□□□□ -0.42
CCDC84-205ENST00000528088 ZNF286BP0CG31 522 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 PSMC6P62333 389 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 HSDL1Q3SXM5 330 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 FAM47CQ5HY64 1035 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 LRCH2Q5VUJ6 765 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 MOXD1Q6UVY6 613 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 FERMT3Q86UX7 667 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 PPTC7Q8NI37 304 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 TNFRSF25Q93038 417 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 TOX2Q96NM4 488 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 MTG1Q9BT17 334 aaPredicted RBP12.43□□□□□ -0.42
CCDC84-205ENST00000528088 TEKT3Q9BXF9 490 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 BCAS3Q9H6U6 928 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 SLC9A2Q9UBY0 812 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 SAMM50Q9Y512 469 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 MYH9P35579 1960 aaKnown RBP12.43□□□□□ -0.42
CCDC84-205ENST00000528088 KAT6AQ92794 2004 aa12.43□□□□□ -0.42
CCDC84-205ENST00000528088 A0A0U1RQG5 324 aaPredicted RBP12.42□□□□□ -0.42
CCDC84-205ENST00000528088 DCDC2CA8MYV0 355 aa12.42□□□□□ -0.42
CCDC84-205ENST00000528088 TK2O00142 265 aa12.42□□□□□ -0.42
CCDC84-205ENST00000528088 MSH4O15457 936 aa12.42□□□□□ -0.42
CCDC84-205ENST00000528088 CHMP2AO43633 222 aa12.42□□□□□ -0.42
CCDC84-205ENST00000528088 RAG1P15918 1043 aa12.42□□□□□ -0.42
CCDC84-205ENST00000528088 SYT1P21579 422 aa12.42□□□□□ -0.42
CCDC84-205ENST00000528088 MCM7P33993 719 aa12.42□□□□□ -0.42
CCDC84-205ENST00000528088 Q4G0T1 1027 aa12.42□□□□□ -0.42
CCDC84-205ENST00000528088 RNF19BQ6ZMZ0 732 aa12.42□□□□□ -0.42
CCDC84-205ENST00000528088 FAM126BQ8IXS8 530 aa12.42□□□□□ -0.42
CCDC84-205ENST00000528088 PPP1R13LQ8WUF5 828 aa12.42□□□□□ -0.42
CCDC84-205ENST00000528088 EMID1Q96A84 441 aaPredicted RBP12.42□□□□□ -0.42
CCDC84-205ENST00000528088 TBC1D22BQ9NU19 505 aa12.42□□□□□ -0.42
CCDC84-205ENST00000528088 TBX21Q9UL17 535 aa12.42□□□□□ -0.42
CCDC84-205ENST00000528088 NFASCO94856 1347 aa12.42□□□□□ -0.42
CCDC84-205ENST00000528088 BACH1O14867 736 aa12.41□□□□□ -0.42
CCDC84-205ENST00000528088 STX6O43752 255 aa12.41□□□□□ -0.42
CCDC84-205ENST00000528088 SLC37A4O43826 429 aa12.41□□□□□ -0.42
CCDC84-205ENST00000528088 NEMFO60524 1076 aa12.41□□□□□ -0.42
CCDC84-205ENST00000528088 CABYRO75952 493 aa12.41□□□□□ -0.42
CCDC84-205ENST00000528088 U2AF2P26368 475 aaKnown RBP eCLIP12.41□□□□□ -0.426e-7■□□□□ 11
CCDC84-205ENST00000528088 ITGB3BPQ13352 177 aaPredicted RBP12.41□□□□□ -0.42
CCDC84-205ENST00000528088 CALCRLQ16602 461 aa12.41□□□□□ -0.42
CCDC84-205ENST00000528088 TTC38Q5R3I4 469 aa12.41□□□□□ -0.42
CCDC84-205ENST00000528088 FOXD4L5Q5VV16 416 aaPredicted RBP12.41□□□□□ -0.42
CCDC84-205ENST00000528088 PPP4R3AQ6IN85 833 aa12.41□□□□□ -0.42
CCDC84-205ENST00000528088 BLOC1S3Q6QNY0 202 aa12.41□□□□□ -0.42
CCDC84-205ENST00000528088 SLC43A3Q8NBI5 491 aa12.41□□□□□ -0.42
CCDC84-205ENST00000528088 FOXD4L4Q8WXT5 416 aaPredicted RBP12.41□□□□□ -0.42
CCDC84-205ENST00000528088 GLG1Q92896 1179 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms