RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 NFIAQ12857 509 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 GRB10Q13322 594 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 GRIK5Q16478 980 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 B4GALNT4Q76KP1 1039 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 NKX2-3Q8TAU0 364 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 STIM2Q9P246 746 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 USTQ9Y2C2 406 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 KDM3BQ7LBC6 1761 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 LIG4P49917 911 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 TBX2Q13207 712 aaPredicted RBP12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 TTC19Q6DKK2 380 aaPredicted RBP12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 ZNF365Q70YC5 407 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 SH3RF1Q7Z6J0 888 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 EIF2AK1Q9BQI3 630 aaKnown RBP12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 KCNK9Q9NPC2 374 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 UBE2TQ9NPD8 197 aaPredicted RBP12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 TYW1Q9NV66 732 aaKnown RBP12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 RNF181Q9P0P0 153 aa12.26□□□□□ -0.45
PCDHGB4-201ENST00000519479 IQCA1LA6NCM1 817 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 HNRNPDLO14979 420 aaKnown RBP12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 ZNF185O15231 689 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 MESDQ14696 234 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 TRIM65Q6PJ69 517 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 DEPTORQ8TB45 409 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 BCAS4Q8TDM0 211 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 EDEM3Q9BZQ6 932 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 NSRP1Q9H0G5 558 aaKnown RBP12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 TMEM206Q9H813 350 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 INTS13Q9NVM9 706 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 TM4SF1P30408 202 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 PRELPP51888 382 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 PMS1P54277 932 aaKnown RBP12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 HDLBPQ00341 1268 aaKnown RBP12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 APOBEC3FQ8IUX4 373 aaKnown RBP12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 BANK1Q8NDB2 785 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 ATP2A1O14983 1001 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 IL1R1P14778 569 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 PDE6CP51160 858 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 PPP2R5EQ16537 467 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 RNF10Q8N5U6 811 aaKnown RBP12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 ANKS4BQ8N8V4 417 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 LRRN4CLQ8ND94 238 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 C1orf112Q9NSG2 853 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 MARF1Q9Y4F3 1742 aaKnown RBP12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 WNT7AO00755 349 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 TRPC3Q13507 836 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 E2F4Q16254 413 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 AP1M1Q9BXS5 423 aa12.25□□□□□ -0.45
PCDHGB4-201ENST00000519479 NOP56O00567 594 aaKnown RBP12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 FUT2Q10981 343 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 CCDC91Q7Z6B0 441 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 ANKS1AQ92625 1134 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 PBKQ96KB5 322 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 ERGIC2Q96RQ1 377 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 DNAJC12Q9UKB3 198 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 NFU1Q9UMS0 254 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 TACC3Q9Y6A5 838 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 STRCP1A6NGW2 1772 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 MXI1P50539 228 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 DDR1Q08345 913 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 NOA1Q8NC60 698 aaKnown RBP12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 AZI2Q9H6S1 392 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 ZNF408Q9H9D4 720 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 E7EVH7 732 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 CEP170P1Q96L14 293 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 NT5C1BQ96P26 610 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 RIOX1Q9H6W3 641 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 PPANQ9NQ55 473 aaKnown RBP12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 HERC5Q9UII4 1024 aaKnown RBP12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 SNX12Q9UMY4 172 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 IKBKGQ9Y6K9 419 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 ABCB11O95342 1321 aa12.24□□□□□ -0.45
PCDHGB4-201ENST00000519479 H2AFXP16104 143 aaPredicted RBP12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 MFAP3P55082 362 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 DENND2CQ68D51 928 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 ARMC9Q7Z3E5 817 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 ATP6V0A1Q93050 837 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 REEP2Q9BRK0 252 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 KMT5AQ9NQR1 393 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 PACSIN2Q9UNF0 486 aaPredicted RBP12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 GOLGA8IPA6NC78 632 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 GOLGA8JA6NMD2 632 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 IPO5O00410 1097 aaKnown RBP12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 VIMP08670 466 aaKnown RBP12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 EMBQ6PCB8 327 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 DCUN1D2Q6PH85 259 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 PADI6Q6TGC4 694 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 DNAJC7Q99615 494 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 KCNG1Q9UIX4 513 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 LRRIQ4A6NIV6 560 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 PSMD14O00487 310 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 MYCNP04198 464 aaPredicted RBP12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 APBA1Q02410 837 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 ANKRD35Q8N283 1001 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 SPATA4Q8NEY3 305 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 GLG1Q92896 1179 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 DNAI2Q9GZS0 605 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 SEPT9Q9UHD8 586 aaPredicted RBP12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 EYA4O95677 639 aa12.23□□□□□ -0.45
PCDHGB4-201ENST00000519479 PLEKP08567 350 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms