RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 ZNF200P98182 395 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 ITGB3BPQ13352 177 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 SHHQ15465 462 aa12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 UTP14CQ5TAP6 766 aaKnown RBP12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 TEX2Q8IWB9 1127 aa12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 TDHQ8IZJ6 230 aa12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 ZNF516Q92618 1163 aa12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 USB1Q9BQ65 265 aaKnown RBP12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 NOC4LQ9BVI4 516 aaKnown RBP12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 WNT8AQ9H1J5 351 aa12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 AGO4Q9HCK5 861 aaKnown RBP12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 ORC3Q9UBD5 711 aaPredicted RBP12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 GTF2IRD1Q9UHL9 959 aa12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 PCDHA4Q9UN74 947 aa12.55□□□□□ -0.4
UBE2D3-232ENST00000514755 TLL1O43897 1013 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 ADH1BP00325 375 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 CSF2RAP15509 400 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 TCF7P36402 384 aaPredicted RBP12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 ZNF76P36508 570 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 PTGISQ16647 500 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 MFSD5Q6N075 450 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 C16orf59Q7L2K0 433 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 SESTD1Q86VW0 696 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 PLA2G4DQ86XP0 818 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 CCDC83Q8IWF9 413 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 BLIDQ8IZY5 108 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 DAGLBQ8NCG7 672 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 DHX38Q92620 1227 aaKnown RBP12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 WNT8BQ93098 351 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 LENG9Q96B70 501 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 VWCEQ96DN2 955 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 SCLYQ96I15 445 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 CDHR1Q96JP9 859 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 PHF20Q9BVI0 1012 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 SEZ6LQ9BYH1 1024 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 HIPK3Q9H422 1215 aa12.54□□□□□ -0.4
UBE2D3-232ENST00000514755 TRIP12Q14669 1992 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 A0A1W2PPC1 479 aa12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 H3BRB1 525 aa12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 DDX39AO00148 427 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 MAFGO15525 162 aa12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 CD2BP2O95400 341 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 ACRP10323 421 aa12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 FPGSQ05932 587 aa12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 PTPN11Q06124 597 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 MSS51Q4VC12 460 aa12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 EARS2Q5JPH6 523 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 C7orf31Q8N865 590 aa12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 BICD2Q8TD16 824 aa12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 TBCKQ8TEA7 893 aa12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 PCYT2Q99447 389 aa12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 SPSB2Q99619 263 aa12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 KATNAL1Q9BW62 490 aa12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 TUT1Q9H6E5 874 aaKnown RBP12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 JPH1Q9HDC5 661 aaPredicted RBP12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 LIMCH1Q9UPQ0 1083 aa12.53□□□□□ -0.4
UBE2D3-232ENST00000514755 SCN5AQ14524 2016 aa12.52□□□□□ -0.4
UBE2D3-232ENST00000514755 CFAP99D6REC4 459 aa12.52□□□□□ -0.41
UBE2D3-232ENST00000514755 DHX15O43143 795 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-232ENST00000514755 CCNE2O96020 404 aa12.52□□□□□ -0.41
UBE2D3-232ENST00000514755 CIITAP33076 1130 aa12.52□□□□□ -0.41
UBE2D3-232ENST00000514755 PRR16Q569H4 304 aa12.52□□□□□ -0.41
UBE2D3-232ENST00000514755 GIMAP8Q8ND71 665 aaPredicted RBP12.52□□□□□ -0.41
UBE2D3-232ENST00000514755 SEPT1Q8WYJ6 367 aa12.52□□□□□ -0.41
UBE2D3-232ENST00000514755 GJA10Q969M2 543 aa12.52□□□□□ -0.41
UBE2D3-232ENST00000514755 TBC1D32Q96NH3 1257 aa12.52□□□□□ -0.41
UBE2D3-232ENST00000514755 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.52□□□□□ -0.41
UBE2D3-232ENST00000514755 RNPEPQ9H4A4 650 aa12.52□□□□□ -0.41
UBE2D3-232ENST00000514755 SLC9A2Q9UBY0 812 aa12.52□□□□□ -0.41
UBE2D3-232ENST00000514755 NFASCO94856 1347 aa12.52□□□□□ -0.41
UBE2D3-232ENST00000514755 SZT2Q5T011 3432 aa12.52□□□□□ -0.41
UBE2D3-232ENST00000514755 TDP2O95551 362 aa12.51□□□□□ -0.41
UBE2D3-232ENST00000514755 SUPT20HL2P0C7V6 817 aa12.51□□□□□ -0.41
UBE2D3-232ENST00000514755 SMIM10L2AP0DMW4 78 aa12.51□□□□□ -0.41
UBE2D3-232ENST00000514755 SMIM10L2BP0DMW5 78 aa12.51□□□□□ -0.41
UBE2D3-232ENST00000514755 MARK3P27448 753 aa12.51□□□□□ -0.41
UBE2D3-232ENST00000514755 ACTR2P61160 394 aa12.51□□□□□ -0.41
UBE2D3-232ENST00000514755 KCNC4Q03721 635 aa12.51□□□□□ -0.41
UBE2D3-232ENST00000514755 NR5A1Q13285 461 aa12.51□□□□□ -0.41
UBE2D3-232ENST00000514755 INF2Q27J81 1249 aa12.51□□□□□ -0.41
UBE2D3-232ENST00000514755 TMEM259Q4ZIN3 620 aa12.51□□□□□ -0.41
UBE2D3-232ENST00000514755 TMEM240Q5SV17 173 aa12.51□□□□□ -0.41
UBE2D3-232ENST00000514755 MCTP2Q6DN12 878 aa12.51□□□□□ -0.41
UBE2D3-232ENST00000514755 DESI1Q6ICB0 168 aa12.51□□□□□ -0.41
UBE2D3-232ENST00000514755 NIPA1Q7RTP0 329 aa12.51□□□□□ -0.41
UBE2D3-232ENST00000514755 TMEM199Q8N511 208 aa12.51□□□□□ -0.41
UBE2D3-232ENST00000514755 PRR7Q8TB68 274 aa12.51□□□□□ -0.41
UBE2D3-232ENST00000514755 SETD4Q9NVD3 440 aa12.51□□□□□ -0.41
UBE2D3-232ENST00000514755 NOD1Q9Y239 953 aa12.51□□□□□ -0.41
UBE2D3-232ENST00000514755 IPO5O00410 1097 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-232ENST00000514755 MSH4O15457 936 aa12.5□□□□□ -0.41
UBE2D3-232ENST00000514755 TREHO43280 583 aa12.5□□□□□ -0.41
UBE2D3-232ENST00000514755 LGR5O75473 907 aa12.5□□□□□ -0.41
UBE2D3-232ENST00000514755 IQCF3P0C7M6 154 aa12.5□□□□□ -0.41
UBE2D3-232ENST00000514755 HOXC8P31273 242 aa12.5□□□□□ -0.41
UBE2D3-232ENST00000514755 GPNMBQ14956 572 aa12.5□□□□□ -0.41
UBE2D3-232ENST00000514755 RABEP1Q15276 862 aa12.5□□□□□ -0.41
UBE2D3-232ENST00000514755 TRIM71Q2Q1W2 868 aaKnown RBP12.5□□□□□ -0.41
UBE2D3-232ENST00000514755 LRIT3Q3SXY7 679 aa12.5□□□□□ -0.41
UBE2D3-232ENST00000514755 GALNT17Q6IS24 598 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms