RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 PLA2G1BP04054 148 aaKnown RBP5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 ADRB1P08588 477 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 GJA9P57773 515 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 SART3Q15020 963 aaKnown RBP5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 ZNF174Q15697 407 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 CFAP100Q494V2 611 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 TMEM177Q53S58 311 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 FAM26FQ5R3K3 315 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 LIPIQ6XZB0 460 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 PTRH1Q86Y79 214 aaKnown RBP5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 NIM1KQ8IY84 436 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 CNPY4Q8N129 248 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 CARFQ8N187 725 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 FAM26EQ8N5C1 309 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 CISD2Q8N5K1 135 aaKnown RBP5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 IGDCC4Q8TDY8 1250 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 SCLYQ96I15 445 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 SCYL1Q96KG9 808 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 PSMD1Q99460 953 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 CD244Q9BZW8 370 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 KCNH7Q9NS40 1196 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 USP40Q9NVE5 1235 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 ARHGAP20Q9P2F6 1191 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 CBLCQ9ULV8 474 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 COQ6Q9Y2Z9 468 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 WASHC2AQ641Q2 1341 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 GAPVD1Q14C86 1478 aa5.87□□□□□ -1.47
HMGB3P13-201ENST00000511263 WDR97A6NE52 1622 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 BIVM-ERCC5R4GMW8 1640 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 GRIN2BQ13224 1484 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 PRXQ9BXM0 1461 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 RAD54L2Q9Y4B4 1467 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 FHAD1B1AJZ9 1412 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 MAN2B1O00754 1011 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 PPP1R12AO14974 1030 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 CYP1A1P04798 512 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 CKMP06732 381 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 HSD3B2P26439 372 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 JAM2P57087 298 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 OCRLQ01968 901 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 SMAD4Q13485 552 aaKnown RBP5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 SKIDA1Q1XH10 827 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 VWA3BQ502W6 1294 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 CD276Q5ZPR3 534 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 BORAQ6PGQ7 559 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 OVCH1Q7RTY7 1134 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 FGD2Q7Z6J4 655 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 NME9Q86XW9 330 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 KIF18BQ86Y91 864 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 PASD1Q8IV76 773 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 FAM177A1Q8N128 213 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 CHST14Q8NCH0 376 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 CALML6Q8TD86 181 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 ZNF622Q969S3 477 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 MFSD3Q96ES6 412 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 TEPSINQ96N21 525 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 NOX5Q96PH1 765 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 PCIF1Q9H4Z3 704 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 BARX1Q9HBU1 254 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 CROTQ9UKG9 612 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 PLA2G2DQ9UNK4 145 aa5.86□□□□□ -1.47
HMGB3P13-201ENST00000511263 RAPGEF2Q9Y4G8 1499 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 C9orf118A6NHY6 69 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 H7C1D1 291 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 FFAR3O14843 346 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 MAFGO15525 162 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 GAS7O60861 476 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 JMJD7P0C870 316 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 NEK4P51957 841 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 IRF9Q00978 393 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 DBPQ10586 325 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 SMAD2Q15796 467 aaKnown RBP5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 PLEKHG4Q58EX7 1191 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 TAF3Q5VWG9 929 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 TMC5Q6UXY8 1006 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 JAZF1Q86VZ6 243 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 SECISBP2LQ93073 1101 aaKnown RBP5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 MAP7D2Q96T17 732 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 BDH2Q9BUT1 245 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 TMEM168Q9H0V1 697 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 PDCL3Q9H2J4 239 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 ACSS2Q9NR19 701 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 IFT57Q9NWB7 429 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 FBXO10Q9UK96 956 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 CD2APQ9Y5K6 639 aa5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 TNPO3Q9Y5L0 923 aaKnown RBP5.85□□□□□ -1.47
HMGB3P13-201ENST00000511263 SYNJ1O43426 1573 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 ERICH3Q5RHP9 1530 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 AQRO60306 1485 aaKnown RBP eCLIP5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 ZNF839A8K0R7 811 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 M0R2C6 588 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 SCDO00767 359 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 PRICKLE3O43900 615 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 LTFP02788 710 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 AMY2AP04746 511 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 CYP17A1P05093 508 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 AMY2BP19961 511 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 SLURP1P55000 103 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 PFKPQ01813 784 aa5.84□□□□□ -1.47
HMGB3P13-201ENST00000511263 EFEMP1Q12805 493 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms