RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 SKIDA1Q1XH10 827 aa3.61□□□□□ -1.83
HMGB1P35-201ENST00000503360 Q6ZPA2 131 aa3.61□□□□□ -1.83
HMGB1P35-201ENST00000503360 JAZF1Q86VZ6 243 aa3.61□□□□□ -1.83
HMGB1P35-201ENST00000503360 LILRB2Q8N423 598 aa3.61□□□□□ -1.83
HMGB1P35-201ENST00000503360 LGR4Q9BXB1 951 aa3.61□□□□□ -1.83
HMGB1P35-201ENST00000503360 EPN3Q9H201 632 aa3.61□□□□□ -1.83
HMGB1P35-201ENST00000503360 CDIP1Q9H305 208 aa3.61□□□□□ -1.83
HMGB1P35-201ENST00000503360 PARPBPQ9NWS1 579 aa3.61□□□□□ -1.83
HMGB1P35-201ENST00000503360 CEP72Q9P209 647 aa3.61□□□□□ -1.83
HMGB1P35-201ENST00000503360 TBX22Q9Y458 520 aa3.61□□□□□ -1.83
HMGB1P35-201ENST00000503360 MRPL42Q9Y6G3 142 aaKnown RBP3.61□□□□□ -1.83
HMGB1P35-201ENST00000503360 KDM2BQ8NHM5 1336 aa3.61□□□□□ -1.83
HMGB1P35-201ENST00000503360 IQCA1LA6NCM1 817 aa3.6□□□□□ -1.83
HMGB1P35-201ENST00000503360 ZNF839A8K0R7 811 aa3.6□□□□□ -1.83
HMGB1P35-201ENST00000503360 AGRPO00253 132 aa3.6□□□□□ -1.83
HMGB1P35-201ENST00000503360 CYP27B1O15528 508 aa3.6□□□□□ -1.83
HMGB1P35-201ENST00000503360 ETV4P43268 484 aa3.6□□□□□ -1.83
HMGB1P35-201ENST00000503360 RNF151Q2KHN1 245 aa3.6□□□□□ -1.83
HMGB1P35-201ENST00000503360 DPP8Q6V1X1 898 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P35-201ENST00000503360 ZNF627Q7L945 461 aa3.6□□□□□ -1.83
HMGB1P35-201ENST00000503360 GPR155Q7Z3F1 870 aa3.6□□□□□ -1.83
HMGB1P35-201ENST00000503360 PRIMA1Q86XR5 153 aa3.6□□□□□ -1.83
HMGB1P35-201ENST00000503360 TMPRSS6Q8IU80 811 aa3.6□□□□□ -1.83
HMGB1P35-201ENST00000503360 LRRC47Q8N1G4 583 aaKnown RBP3.6□□□□□ -1.83
HMGB1P35-201ENST00000503360 SH3TC2Q8TF17 1288 aa3.6□□□□□ -1.83
HMGB1P35-201ENST00000503360 ZNF669Q96BR6 464 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P35-201ENST00000503360 RNPC3Q96LT9 517 aaKnown RBP3.6□□□□□ -1.83
HMGB1P35-201ENST00000503360 CLDND1Q9NY35 253 aa3.6□□□□□ -1.83
HMGB1P35-201ENST00000503360 FBXL7Q9UJT9 491 aa3.6□□□□□ -1.83
HMGB1P35-201ENST00000503360 FBXO10Q9UK96 956 aa3.6□□□□□ -1.83
HMGB1P35-201ENST00000503360 A0A1W2PQU0 124 aa3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 MATN2O00339 956 aa3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 CDC14BO60729 498 aa3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 RHOBTB3O94955 611 aa3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 ITGAVP06756 1048 aa3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 ZNF888P0CJ79 500 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 HIBADHP31937 336 aaKnown RBP3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 EPHA5P54756 1037 aa3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 PAN2Q504Q3 1202 aaKnown RBP3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 CD276Q5ZPR3 534 aa3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 SDE2Q6IQ49 451 aa3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 ZNF227Q86WZ6 799 aa3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 STPG3Q8N7X2 389 aa3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 THAP3Q8WTV1 239 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 CLEC4DQ8WXI8 215 aa3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 SGSM3Q96HU1 749 aa3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 SPATA9Q9BWV2 254 aa3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 PLA2G12BQ9BX93 195 aa3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 KANSL2Q9H9L4 492 aa3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 SLC2A4RGQ9NR83 387 aa3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 GIT1Q9Y2X7 761 aa3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 PCDHA2Q9Y5H9 948 aa3.59□□□□□ -1.83
HMGB1P35-201ENST00000503360 KRTAP29-1A8MX34 341 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 ARHGAP6O43182 974 aa3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 TBX1O43435 398 aa3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 IL18BPO95998 194 aa3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 CAPNS1P04632 268 aa3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 FAM153BP0C7A2 387 aa3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 PPP2R2AP63151 447 aa3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 PFKPQ01813 784 aa3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 HHEXQ03014 270 aa3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 C2orf27AQ580R0 203 aa3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 RSPO2Q6UXX9 243 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 CXXC5Q7LFL8 322 aaKnown RBP3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 PPIL6Q8IXY8 311 aa3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 THEMISQ8N1K5 641 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 ZNF808Q8N4W9 903 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 JMYQ8N9B5 988 aa3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 ZBTB38Q8NAP3 1195 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 UHMK1Q8TAS1 419 aaKnown RBP3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 CLIP3Q96DZ5 547 aa3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 MPHOSPH9Q99550 1183 aa3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 PLA2G3Q9NZ20 509 aa3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 RBPJLQ9UBG7 517 aa3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 NR2E1Q9Y466 385 aa3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 PTCH2Q9Y6C5 1203 aa3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 CADPSQ9ULU8 1353 aa3.58□□□□□ -1.84
HMGB1P35-201ENST00000503360 ESYT3A0FGR9 886 aa3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 INO80B-WBP1J3KQ70 363 aa3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 ADCY3O60266 1144 aa3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 SNRPB2P08579 225 aaKnown RBP3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 GRIA2P42262 883 aa3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 GFRA1P56159 465 aa3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 FOXL1Q12952 345 aa3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 SQSTM1Q13501 440 aa3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 HSP90AA2PQ14568 343 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 SLC35F1Q5T1Q4 408 aa3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 YOD1Q5VVQ6 348 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 OTOP3Q7RTS5 596 aa3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 FAM177A1Q8N128 213 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 BTN2A2Q8WVV5 523 aa3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 CFHR4Q92496 578 aa3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 APPBP2Q92624 585 aa3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 ZNF764Q96H86 408 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 C1orf159Q96HA4 380 aa3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 CHAMP1Q96JM3 812 aa3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 OR14A2Q96R54 314 aa3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 CDC6Q99741 560 aa3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 DPYSL5Q9BPU6 564 aa3.57□□□□□ -1.84
HMGB1P35-201ENST00000503360 AARSD1Q9BTE6 412 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms