RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 ALKBH5Q6P6C2 394 aaKnown RBP14.26□□□□□ -0.13
PTPN7-217ENST00000495688 GBP6Q6ZN66 633 aa14.26□□□□□ -0.13
PTPN7-217ENST00000495688 LENG9Q96B70 501 aa14.26□□□□□ -0.13
PTPN7-217ENST00000495688 FAM169AQ9Y6X4 670 aa14.26□□□□□ -0.13
PTPN7-217ENST00000495688 XRCC5P13010 732 aaKnown RBP14.25□□□□□ -0.13
PTPN7-217ENST00000495688 HOXA13P31271 388 aaPredicted RBP14.25□□□□□ -0.13
PTPN7-217ENST00000495688 LIG3P49916 1009 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 HLTFQ14527 1009 aaKnown RBP eCLIP14.25□□□□□ -0.13
PTPN7-217ENST00000495688 CRYGNQ8WXF5 182 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 BHMT2Q9H2M3 363 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 RGL1Q9NZL6 768 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 TRAF3IP3Q9Y228 551 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 CYP3A7-CYP3A51PA0A087WV96 503 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 PPEF1O14829 653 aaPredicted RBP14.25□□□□□ -0.13
PTPN7-217ENST00000495688 KIF4AO95239 1232 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 CYP3A7P24462 503 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 HOXA10P31260 410 aaPredicted RBP14.25□□□□□ -0.13
PTPN7-217ENST00000495688 SKOR1P84550 965 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 SLFN13Q68D06 897 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 LRRC57Q8N9N7 239 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 OR2W6PQ8NHA6 318 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 TAF4BQ92750 862 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 RUSC1Q9BVN2 902 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 ZC3H12CQ9C0D7 883 aaKnown RBP14.25□□□□□ -0.13
PTPN7-217ENST00000495688 DDX47Q9H0S4 455 aaKnown RBP14.25□□□□□ -0.13
PTPN7-217ENST00000495688 TMEM59LQ9UK28 342 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 DNM3Q9UQ16 869 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 PCDHB13Q9Y5F0 798 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 PITPNM2Q9BZ72 1349 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 ATAD5Q96QE3 1844 aa14.25□□□□□ -0.13
PTPN7-217ENST00000495688 DDTLA6NHG4 134 aaPredicted RBP14.24□□□□□ -0.13
PTPN7-217ENST00000495688 HLA-DOAP06340 250 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 ECHS1P30084 290 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 HOXA7P31268 230 aaPredicted RBP14.24□□□□□ -0.13
PTPN7-217ENST00000495688 TTC31Q49AM3 519 aaPredicted RBP14.24□□□□□ -0.13
PTPN7-217ENST00000495688 PPP4R3CPQ6ZMV5 832 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 EPM2AIP1Q7L775 607 aaPredicted RBP14.24□□□□□ -0.13
PTPN7-217ENST00000495688 SIAH1Q8IUQ4 282 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 SLFN12Q8IYM2 578 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 SYT2Q8N9I0 419 aaPredicted RBP14.24□□□□□ -0.13
PTPN7-217ENST00000495688 PPM1EQ8WY54 764 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 COA1Q9GZY4 146 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 ASTN1O14525 1302 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 LY75O60449 1722 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 SHTN1A0MZ66 631 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 TMCO5BA8MYB1 307 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 NDUFAB1O14561 156 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 ITGA4P13612 1032 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 RPA1P27694 616 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 EPHA7Q15375 998 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 MAATS1Q7Z4T9 603 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 FRMD5Q7Z6J6 570 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 MICALL1Q8N3F8 863 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 METTL13Q8N6R0 699 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 MBOAT7Q96N66 472 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 NEUROG2Q9H2A3 272 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 SIX2Q9NPC8 291 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 USP21Q9UK80 565 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 PLAAQ9Y263 795 aa14.24□□□□□ -0.13
PTPN7-217ENST00000495688 ZBTB39O15060 712 aa14.23□□□□□ -0.13
PTPN7-217ENST00000495688 GCNT3O95395 438 aa14.23□□□□□ -0.13
PTPN7-217ENST00000495688 NR3C1P04150 777 aa14.23□□□□□ -0.13
PTPN7-217ENST00000495688 TNNC1P63316 161 aa14.23□□□□□ -0.13
PTPN7-217ENST00000495688 TADA2BQ86TJ2 420 aa14.23□□□□□ -0.13
PTPN7-217ENST00000495688 KSR1Q8IVT5 923 aa14.23□□□□□ -0.13
PTPN7-217ENST00000495688 EFCAB13Q8IY85 973 aa14.23□□□□□ -0.13
PTPN7-217ENST00000495688 PIGOQ8TEQ8 1089 aa14.23□□□□□ -0.13
PTPN7-217ENST00000495688 SLC35C1Q96A29 364 aa14.23□□□□□ -0.13
PTPN7-217ENST00000495688 CENPHQ9H3R5 247 aa14.23□□□□□ -0.13
PTPN7-217ENST00000495688 PLCB1Q9NQ66 1216 aa14.23□□□□□ -0.13
PTPN7-217ENST00000495688 GCNT4Q9P109 453 aa14.23□□□□□ -0.13
PTPN7-217ENST00000495688 EML1O00423 815 aa14.23□□□□□ -0.13
PTPN7-217ENST00000495688 GDF11O95390 407 aa14.23□□□□□ -0.13
PTPN7-217ENST00000495688 ZBTB48P10074 688 aaPredicted RBP14.23□□□□□ -0.13
PTPN7-217ENST00000495688 IKQ13123 557 aaPredicted RBP14.23□□□□□ -0.13
PTPN7-217ENST00000495688 CEP85LQ5SZL2 805 aa14.23□□□□□ -0.13
PTPN7-217ENST00000495688 TPCN2Q8NHX9 752 aa14.23□□□□□ -0.13
PTPN7-217ENST00000495688 CRAMP1Q96RY5 1269 aa14.23□□□□□ -0.13
PTPN7-217ENST00000495688 TAF1DQ9H5J8 278 aaPredicted RBP14.23□□□□□ -0.13
PTPN7-217ENST00000495688 DDX3XO00571 662 aaKnown RBP eCLIP14.22□□□□□ -0.131e-6■□□□□ 8.9
PTPN7-217ENST00000495688 MSH4O15457 936 aa14.22□□□□□ -0.13
PTPN7-217ENST00000495688 SART1O43290 800 aaKnown RBP14.22□□□□□ -0.13
PTPN7-217ENST00000495688 GFPT2O94808 682 aa14.22□□□□□ -0.13
PTPN7-217ENST00000495688 NR1D1P20393 614 aa14.22□□□□□ -0.13
PTPN7-217ENST00000495688 FLT3P36888 993 aa14.22□□□□□ -0.13
PTPN7-217ENST00000495688 SEC24CP53992 1094 aa14.22□□□□□ -0.13
PTPN7-217ENST00000495688 KIAA0825Q8IV33 1275 aa14.22□□□□□ -0.13
PTPN7-217ENST00000495688 MREGQ8N565 214 aa14.22□□□□□ -0.13
PTPN7-217ENST00000495688 SCFD2Q8WU76 684 aa14.22□□□□□ -0.13
PTPN7-217ENST00000495688 TEKT1Q969V4 418 aa14.22□□□□□ -0.13
PTPN7-217ENST00000495688 NAP1L4Q99733 375 aaKnown RBP14.22□□□□□ -0.13
PTPN7-217ENST00000495688 AMACRQ9UHK6 382 aa14.22□□□□□ -0.13
PTPN7-217ENST00000495688 NOC2LQ9Y3T9 749 aaKnown RBP14.22□□□□□ -0.13
PTPN7-217ENST00000495688 GREB1LQ9C091 1923 aaPredicted RBP14.22□□□□□ -0.13
PTPN7-217ENST00000495688 LTBP1Q14766 1721 aa14.22□□□□□ -0.13
PTPN7-217ENST00000495688 MYO3BQ8WXR4 1341 aa14.22□□□□□ -0.13
PTPN7-217ENST00000495688 POLRMTO00411 1230 aaKnown RBP14.22□□□□□ -0.13
PTPN7-217ENST00000495688 PDXKO00764 312 aa14.22□□□□□ -0.13
PTPN7-217ENST00000495688 HPDP32754 393 aaPredicted RBP14.22□□□□□ -0.13
PTPN7-217ENST00000495688 LSP1P33241 339 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms