RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 OATP04181 439 aa21.72■■□□□ 1.07
PCOLCE-208ENST00000487172 SPATA31C1P0DKV0 1188 aa21.72■■□□□ 1.07
PCOLCE-208ENST00000487172 XKR3Q5GH77 459 aa21.72■■□□□ 1.07
PCOLCE-208ENST00000487172 FAM47CQ5HY64 1035 aa21.72■■□□□ 1.07
PCOLCE-208ENST00000487172 CATSPER3Q86XQ3 398 aa21.72■■□□□ 1.07
PCOLCE-208ENST00000487172 FAM126BQ8IXS8 530 aa21.72■■□□□ 1.07
PCOLCE-208ENST00000487172 KRI1Q8N9T8 703 aaKnown RBP21.72■■□□□ 1.07
PCOLCE-208ENST00000487172 TCHHQ07283 1943 aa21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 RRN3P2A6NIE6 340 aa21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 CD4P01730 458 aa21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 GNAT1P11488 350 aa21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 INSRRP14616 1297 aa21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 RTP1P59025 263 aa21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 CHMP4BP1P59074 171 aa21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 ADAM17P78536 824 aa21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 PRKCEQ02156 737 aa21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 CYP4A11Q02928 519 aa21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 GRIN1Q05586 938 aa21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 CTTNQ14247 550 aaKnown RBP21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 KRT79Q5XKE5 535 aa21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 TPH2Q8IWU9 490 aa21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 CKAP2LQ8IYA6 745 aa21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 KCTD17Q8N5Z5 321 aa21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 NIFKQ9BYG3 293 aaKnown RBP21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 SCAND2PQ9GZW5 306 aaPredicted RBP21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 WRAP73Q9P2S5 460 aaPredicted RBP21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 TRPC6Q9Y210 931 aa21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 KAT6AQ92794 2004 aa21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 COL1A2P08123 1366 aa21.71■■□□□ 1.07
PCOLCE-208ENST00000487172 C17orf102A2RUQ5 167 aa21.7■■□□□ 1.06
PCOLCE-208ENST00000487172 MED24O75448 989 aa21.7■■□□□ 1.06
PCOLCE-208ENST00000487172 XRCC6P12956 609 aaKnown RBP eCLIP21.7■■□□□ 1.06
PCOLCE-208ENST00000487172 TLE2Q04725 743 aa21.7■■□□□ 1.06
PCOLCE-208ENST00000487172 PPFIA1Q13136 1202 aa21.7■■□□□ 1.06
PCOLCE-208ENST00000487172 TRIM60Q495X7 471 aa21.7■■□□□ 1.06
PCOLCE-208ENST00000487172 ZNF484Q5JVG2 852 aa21.7■■□□□ 1.06
PCOLCE-208ENST00000487172 ZNF579Q8NAF0 562 aaKnown RBP21.7■■□□□ 1.06
PCOLCE-208ENST00000487172 MMTAG2Q9BU76 263 aaKnown RBP21.7■■□□□ 1.06
PCOLCE-208ENST00000487172 CSRNP2Q9H175 543 aa21.7■■□□□ 1.06
PCOLCE-208ENST00000487172 DCDC2CA8MYV0 355 aa21.69■■□□□ 1.06
PCOLCE-208ENST00000487172 TLR3O15455 904 aaKnown RBP21.69■■□□□ 1.06
PCOLCE-208ENST00000487172 CUTAO60888 179 aa21.69■■□□□ 1.06
PCOLCE-208ENST00000487172 CDC25AP30304 524 aa21.69■■□□□ 1.06
PCOLCE-208ENST00000487172 CCT6AP40227 531 aaKnown RBP21.69■■□□□ 1.06
PCOLCE-208ENST00000487172 HIC1Q14526 733 aa21.69■■□□□ 1.06
PCOLCE-208ENST00000487172 GRIK4Q16099 956 aa21.69■■□□□ 1.06
PCOLCE-208ENST00000487172 HYIQ5T013 277 aa21.69■■□□□ 1.06
PCOLCE-208ENST00000487172 GDF6Q6KF10 455 aaPredicted RBP21.69■■□□□ 1.06
PCOLCE-208ENST00000487172 OTUD6AQ7L8S5 288 aa21.69■■□□□ 1.06
PCOLCE-208ENST00000487172 SNX29Q8TEQ0 813 aa21.69■■□□□ 1.06
PCOLCE-208ENST00000487172 PPP1R13LQ8WUF5 828 aa21.69■■□□□ 1.06
PCOLCE-208ENST00000487172 LEO1Q8WVC0 666 aaPredicted RBP21.69■■□□□ 1.06
PCOLCE-208ENST00000487172 CHAMP1Q96JM3 812 aa21.69■■□□□ 1.06
PCOLCE-208ENST00000487172 CLIC6Q96NY7 704 aa21.69■■□□□ 1.06
PCOLCE-208ENST00000487172 CCSER1Q9C0I3 900 aa21.69■■□□□ 1.06
PCOLCE-208ENST00000487172 SETD4Q9NVD3 440 aa21.69■■□□□ 1.06
PCOLCE-208ENST00000487172 ALPK3Q96L96 1907 aa21.68■■□□□ 1.06
PCOLCE-208ENST00000487172 MBLAC1A4D2B0 266 aaPredicted RBP21.68■■□□□ 1.06
PCOLCE-208ENST00000487172 PP2D1A8MPX8 630 aa21.68■■□□□ 1.06
PCOLCE-208ENST00000487172 B4GALT4O60513 344 aa21.68■■□□□ 1.06
PCOLCE-208ENST00000487172 NCLP19338 710 aaKnown RBP21.68■■□□□ 1.06
PCOLCE-208ENST00000487172 YWHABP31946 246 aaKnown RBP21.68■■□□□ 1.06
PCOLCE-208ENST00000487172 UBA7P41226 1012 aa21.68■■□□□ 1.06
PCOLCE-208ENST00000487172 TARBP2Q15633 366 aaKnown RBP21.68■■□□□ 1.06
PCOLCE-208ENST00000487172 ANO5Q75V66 913 aa21.68■■□□□ 1.06
PCOLCE-208ENST00000487172 LMBR1Q8WVP7 490 aa21.68■■□□□ 1.06
PCOLCE-208ENST00000487172 SPATA32Q96LK8 384 aa21.68■■□□□ 1.06
PCOLCE-208ENST00000487172 NACC1Q96RE7 527 aa21.68■■□□□ 1.06
PCOLCE-208ENST00000487172 ANKEF1Q9NU02 776 aa21.68■■□□□ 1.06
PCOLCE-208ENST00000487172 PCDHA7Q9UN72 937 aa21.68■■□□□ 1.06
PCOLCE-208ENST00000487172 ATP11BQ9Y2G3 1177 aa21.68■■□□□ 1.06
PCOLCE-208ENST00000487172 PPME1Q9Y570 386 aa21.68■■□□□ 1.06
PCOLCE-208ENST00000487172 KDM3AQ9Y4C1 1321 aa21.67■■□□□ 1.06
PCOLCE-208ENST00000487172 DDX11L8A8MPP1 907 aa21.67■■□□□ 1.06
PCOLCE-208ENST00000487172 ZBTB42B2RXF5 422 aa21.67■■□□□ 1.06
PCOLCE-208ENST00000487172 PQBP1O60828 265 aaKnown RBP21.67■■□□□ 1.06
PCOLCE-208ENST00000487172 FAAP100Q0VG06 881 aa21.67■■□□□ 1.06
PCOLCE-208ENST00000487172 ECM1Q16610 540 aa21.67■■□□□ 1.06
PCOLCE-208ENST00000487172 PTGISQ16647 500 aa21.67■■□□□ 1.06
PCOLCE-208ENST00000487172 MARCH8Q5T0T0 291 aa21.67■■□□□ 1.06
PCOLCE-208ENST00000487172 AXDND1Q5T1B0 1012 aaPredicted RBP21.67■■□□□ 1.06
PCOLCE-208ENST00000487172 CABP7Q86V35 215 aa21.67■■□□□ 1.06
PCOLCE-208ENST00000487172 TRPV6Q9H1D0 765 aa21.67■■□□□ 1.06
PCOLCE-208ENST00000487172 CAPN15O75808 1086 aa21.66■■□□□ 1.06
PCOLCE-208ENST00000487172 TRMT1LQ7Z2T5 733 aaKnown RBP21.66■■□□□ 1.06
PCOLCE-208ENST00000487172 CTAGE1Q96RT6 745 aa21.66■■□□□ 1.06
PCOLCE-208ENST00000487172 CEP89Q96ST8 783 aa21.66■■□□□ 1.06
PCOLCE-208ENST00000487172 NT5C3AQ9H0P0 336 aa21.66■■□□□ 1.06
PCOLCE-208ENST00000487172 TRMT13Q9NUP7 481 aaKnown RBP21.66■■□□□ 1.06
PCOLCE-208ENST00000487172 SEPT9Q9UHD8 586 aaPredicted RBP21.66■■□□□ 1.06
PCOLCE-208ENST00000487172 DBR1Q9UK59 544 aaKnown RBP21.66■■□□□ 1.06
PCOLCE-208ENST00000487172 KIAA1024Q9UPX6 916 aa21.66■■□□□ 1.06
PCOLCE-208ENST00000487172 TRIP12Q14669 1992 aaPredicted RBP21.66■■□□□ 1.06
PCOLCE-208ENST00000487172 MAGEB2O15479 319 aa21.65■■□□□ 1.06
PCOLCE-208ENST00000487172 TREHO43280 583 aa21.65■■□□□ 1.06
PCOLCE-208ENST00000487172 CLTBP09497 229 aa21.65■■□□□ 1.06
PCOLCE-208ENST00000487172 ME1P48163 572 aa21.65■■□□□ 1.06
PCOLCE-208ENST00000487172 ZNF200P98182 395 aaPredicted RBP21.65■■□□□ 1.06
PCOLCE-208ENST00000487172 PTK7Q13308 1070 aa21.65■■□□□ 1.06
PCOLCE-208ENST00000487172 POTEGQ6S5H5 508 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms