RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 BCL6P41182 706 aa7.08□□□□□ -1.28
UPF3A-205ENST00000479712 IL2P60568 153 aa7.08□□□□□ -1.28
UPF3A-205ENST00000479712 TMPRSS15P98073 1019 aa7.08□□□□□ -1.28
UPF3A-205ENST00000479712 SPATS2Q86XZ4 545 aaKnown RBP7.08□□□□□ -1.28
UPF3A-205ENST00000479712 NXPE1Q8N323 547 aa7.08□□□□□ -1.28
UPF3A-205ENST00000479712 MISP3Q96FF7 219 aa7.08□□□□□ -1.28
UPF3A-205ENST00000479712 KRTAP4-12Q9BQ66 201 aa7.08□□□□□ -1.28
UPF3A-205ENST00000479712 CLDND1Q9NY35 253 aa7.08□□□□□ -1.28
UPF3A-205ENST00000479712 SLC5A4Q9NY91 659 aa7.08□□□□□ -1.28
UPF3A-205ENST00000479712 APOBEC2Q9Y235 224 aaKnown RBP7.08□□□□□ -1.28
UPF3A-205ENST00000479712 ZKSCAN5Q9Y2L8 839 aa7.08□□□□□ -1.28
UPF3A-205ENST00000479712 TNRC6CQ9HCJ0 1690 aaKnown RBP7.08□□□□□ -1.28
UPF3A-205ENST00000479712 VIRMAQ69YN4 1812 aaKnown RBP7.08□□□□□ -1.28
UPF3A-205ENST00000479712 FMN2Q9NZ56 1722 aa7.07□□□□□ -1.28
UPF3A-205ENST00000479712 PARP4Q9UKK3 1724 aaKnown RBP7.07□□□□□ -1.28
UPF3A-205ENST00000479712 ADAMTS7Q9UKP4 1686 aa7.07□□□□□ -1.28
UPF3A-205ENST00000479712 ATP7BP35670 1465 aa7.07□□□□□ -1.28
UPF3A-205ENST00000479712 TRAF5O00463 557 aa7.07□□□□□ -1.28
UPF3A-205ENST00000479712 ZEB2O60315 1214 aa7.07□□□□□ -1.28
UPF3A-205ENST00000479712 KATNA1O75449 491 aa7.07□□□□□ -1.28
UPF3A-205ENST00000479712 PARNO95453 639 aaKnown RBP7.07□□□□□ -1.28
UPF3A-205ENST00000479712 PYGMP11217 842 aa7.07□□□□□ -1.28
UPF3A-205ENST00000479712 DSG1Q02413 1049 aa7.07□□□□□ -1.28
UPF3A-205ENST00000479712 LCE3BQ5TA77 95 aa7.07□□□□□ -1.28
UPF3A-205ENST00000479712 CISD2Q8N5K1 135 aaKnown RBP7.07□□□□□ -1.28
UPF3A-205ENST00000479712 CHST14Q8NCH0 376 aa7.07□□□□□ -1.28
UPF3A-205ENST00000479712 PANK1Q8TE04 598 aa7.07□□□□□ -1.28
UPF3A-205ENST00000479712 TMEM169Q96HH4 297 aa7.07□□□□□ -1.28
UPF3A-205ENST00000479712 MAP6Q96JE9 813 aa7.07□□□□□ -1.28
UPF3A-205ENST00000479712 CARS2Q9HA77 564 aaKnown RBP7.07□□□□□ -1.28
UPF3A-205ENST00000479712 CATSPERZQ9NTU4 200 aa7.07□□□□□ -1.28
UPF3A-205ENST00000479712 TNFRSF10DQ9UBN6 386 aa7.07□□□□□ -1.28
UPF3A-205ENST00000479712 C10orf71Q711Q0 1435 aa7.07□□□□□ -1.28
UPF3A-205ENST00000479712 CDC42BPGQ6DT37 1551 aa7.07□□□□□ -1.28
UPF3A-205ENST00000479712 ID4P47928 161 aa7.06□□□□□ -1.28
UPF3A-205ENST00000479712 DUSP4Q13115 394 aa7.06□□□□□ -1.28
UPF3A-205ENST00000479712 MSMPQ1L6U9 139 aa7.06□□□□□ -1.28
UPF3A-205ENST00000479712 C16orf59Q7L2K0 433 aa7.06□□□□□ -1.28
UPF3A-205ENST00000479712 OVCH1Q7RTY7 1134 aa7.06□□□□□ -1.28
UPF3A-205ENST00000479712 NLRP10Q86W26 655 aa7.06□□□□□ -1.28
UPF3A-205ENST00000479712 DPF3Q92784 378 aa7.06□□□□□ -1.28
UPF3A-205ENST00000479712 KCNJ15Q99712 375 aa7.06□□□□□ -1.28
UPF3A-205ENST00000479712 G6PC3Q9BUM1 346 aa7.06□□□□□ -1.28
UPF3A-205ENST00000479712 CDIP1Q9H305 208 aa7.06□□□□□ -1.28
UPF3A-205ENST00000479712 GULP1Q9UBP9 304 aa7.06□□□□□ -1.28
UPF3A-205ENST00000479712 B4GALT6Q9UBX8 382 aa7.06□□□□□ -1.28
UPF3A-205ENST00000479712 PKD1L3Q7Z443 1732 aa7.06□□□□□ -1.28
UPF3A-205ENST00000479712 ARHGEF10O15013 1369 aa7.06□□□□□ -1.28
UPF3A-205ENST00000479712 KANK1Q14678 1352 aa7.06□□□□□ -1.28
UPF3A-205ENST00000479712 KIF15Q9NS87 1388 aa7.06□□□□□ -1.28
UPF3A-205ENST00000479712 MEGF6O75095 1541 aa7.06□□□□□ -1.28
UPF3A-205ENST00000479712 KIF1AQ12756 1690 aa7.06□□□□□ -1.28
UPF3A-205ENST00000479712 LRRC37A3O60309 1634 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 FADS2P1A8MWK0 482 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 H7BY64 318 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 GRIK1P39086 918 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 CD96P40200 585 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 ADCYAP1R1P41586 468 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 MECP2P51608 486 aaKnown RBP7.05□□□□□ -1.28
UPF3A-205ENST00000479712 RBM10P98175 930 aaKnown RBP7.05□□□□□ -1.28
UPF3A-205ENST00000479712 BNIP3Q12983 259 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 CRY1Q16526 586 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 CEP68Q76N32 757 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 STK11IPQ8N1F8 1099 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 TCP11L2Q8N4U5 519 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 C2orf69Q8N8R5 385 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 MTMR8Q96EF0 704 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 HHIPL1Q96JK4 782 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 GPR101Q96P66 508 aaPredicted RBP7.05□□□□□ -1.28
UPF3A-205ENST00000479712 JAM3Q9BX67 310 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 SEMA6BQ9H3T3 888 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 CRTAC1Q9NQ79 661 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 BSDC1Q9NW68 430 aaPredicted RBP7.05□□□□□ -1.28
UPF3A-205ENST00000479712 LMCD1Q9NZU5 365 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 MARCH2Q9P0N8 246 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 SLAMF8Q9P0V8 285 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 CBLCQ9ULV8 474 aa7.05□□□□□ -1.28
UPF3A-205ENST00000479712 QSER1Q2KHR3 1735 aa7.04□□□□□ -1.28
UPF3A-205ENST00000479712 SSH2Q76I76 1423 aa7.04□□□□□ -1.28
UPF3A-205ENST00000479712 PTPDC1A2A3K4 754 aa7.04□□□□□ -1.28
UPF3A-205ENST00000479712 WTIPA6NIX2 430 aaPredicted RBP7.04□□□□□ -1.28
UPF3A-205ENST00000479712 ALDH1L1O75891 902 aa7.04□□□□□ -1.28
UPF3A-205ENST00000479712 FKBP9O95302 570 aa7.04□□□□□ -1.28
UPF3A-205ENST00000479712 FPR2P25090 351 aa7.04□□□□□ -1.28
UPF3A-205ENST00000479712 LSSP48449 732 aa7.04□□□□□ -1.28
UPF3A-205ENST00000479712 ITKQ08881 620 aa7.04□□□□□ -1.28
UPF3A-205ENST00000479712 MTMR1Q13613 665 aa7.04□□□□□ -1.28
UPF3A-205ENST00000479712 ZMYM1Q5SVZ6 1142 aa7.04□□□□□ -1.28
UPF3A-205ENST00000479712 FKBP9P1Q75LS8 142 aa7.04□□□□□ -1.28
UPF3A-205ENST00000479712 NOL8Q76FK4 1167 aaKnown RBP7.04□□□□□ -1.28
UPF3A-205ENST00000479712 SLCO6A1Q86UG4 719 aa7.04□□□□□ -1.28
UPF3A-205ENST00000479712 TEX2Q8IWB9 1127 aa7.04□□□□□ -1.28
UPF3A-205ENST00000479712 LINC01599Q8WXQ3 324 aa7.04□□□□□ -1.28
UPF3A-205ENST00000479712 TRMT2BQ96GJ1 504 aaKnown RBP7.04□□□□□ -1.28
UPF3A-205ENST00000479712 JMJD8Q96S16 334 aa7.04□□□□□ -1.28
UPF3A-205ENST00000479712 ASPSCR1Q9BZE9 553 aa7.04□□□□□ -1.28
UPF3A-205ENST00000479712 THG1LQ9NWX6 298 aaKnown RBP7.04□□□□□ -1.28
UPF3A-205ENST00000479712 CHPF2Q9P2E5 772 aa7.04□□□□□ -1.28
UPF3A-205ENST00000479712 RAPGEFL1Q9UHV5 662 aa7.04□□□□□ -1.28
UPF3A-205ENST00000479712 THRAP3Q9Y2W1 955 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms