RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 C8orf48Q96LL4 319 aa7.98□□□□□ -1.13
VPS50-212ENST00000476413 DTLQ9NZJ0 730 aa7.98□□□□□ -1.13
VPS50-212ENST00000476413 HSPBP1Q9NZL4 362 aa7.98□□□□□ -1.13
VPS50-212ENST00000476413 MSRAQ9UJ68 235 aa7.98□□□□□ -1.13
VPS50-212ENST00000476413 WASHC2AQ641Q2 1341 aa7.98□□□□□ -1.13
VPS50-212ENST00000476413 GOLGA8AA7E2F4 631 aa7.97□□□□□ -1.13
VPS50-212ENST00000476413 GOLGA8BA8MQT2 603 aa7.97□□□□□ -1.13
VPS50-212ENST00000476413 GOLGA6L22H0YM25 854 aa7.97□□□□□ -1.13
VPS50-212ENST00000476413 AOAHP28039 575 aa7.97□□□□□ -1.13
VPS50-212ENST00000476413 GP2P55259 537 aaKnown RBP7.97□□□□□ -1.13
VPS50-212ENST00000476413 DBPQ10586 325 aaPredicted RBP7.97□□□□□ -1.13
VPS50-212ENST00000476413 CXorf67Q86X51 503 aaPredicted RBP7.97□□□□□ -1.13
VPS50-212ENST00000476413 PROSER1Q86XN7 944 aa7.97□□□□□ -1.13
VPS50-212ENST00000476413 CILP2Q8IUL8 1156 aa7.97□□□□□ -1.13
VPS50-212ENST00000476413 GBP4Q96PP9 640 aa7.97□□□□□ -1.13
VPS50-212ENST00000476413 TCF7L1Q9HCS4 588 aa7.97□□□□□ -1.13
VPS50-212ENST00000476413 CCM2LQ9NUG4 571 aaPredicted RBP7.97□□□□□ -1.13
VPS50-212ENST00000476413 USP36Q9P275 1121 aaKnown RBP7.97□□□□□ -1.13
VPS50-212ENST00000476413 WASF3Q9UPY6 502 aa7.97□□□□□ -1.13
VPS50-212ENST00000476413 PRPF3O43395 683 aaKnown RBP7.96□□□□□ -1.14
VPS50-212ENST00000476413 MPIG6BO95866 241 aa7.96□□□□□ -1.14
VPS50-212ENST00000476413 FBLN1P23142 703 aa7.96□□□□□ -1.14
VPS50-212ENST00000476413 MC4RP32245 332 aa7.96□□□□□ -1.14
VPS50-212ENST00000476413 RGL3Q3MIN7 710 aa7.96□□□□□ -1.14
VPS50-212ENST00000476413 ATG4DQ86TL0 474 aaPredicted RBP7.96□□□□□ -1.14
VPS50-212ENST00000476413 CHPFQ8IZ52 775 aa7.96□□□□□ -1.14
VPS50-212ENST00000476413 ZNF180Q9UJW8 692 aa7.96□□□□□ -1.14
VPS50-212ENST00000476413 DBR1Q9UK59 544 aaKnown RBP7.96□□□□□ -1.14
VPS50-212ENST00000476413 LUC7L2Q9Y383 392 aaKnown RBP7.96□□□□□ -1.14
VPS50-212ENST00000476413 ASB1Q9Y576 335 aa7.96□□□□□ -1.14
VPS50-212ENST00000476413 ELL2O00472 640 aaPredicted RBP7.95□□□□□ -1.14
VPS50-212ENST00000476413 RFPL1O75677 317 aa7.95□□□□□ -1.14
VPS50-212ENST00000476413 MANFP55145 182 aaKnown RBP7.95□□□□□ -1.14
VPS50-212ENST00000476413 ADCY1Q08828 1119 aa7.95□□□□□ -1.14
VPS50-212ENST00000476413 CR1LQ2VPA4 569 aa7.95□□□□□ -1.14
VPS50-212ENST00000476413 TMEM240Q5SV17 173 aa7.95□□□□□ -1.14
VPS50-212ENST00000476413 ZBTB41Q5SVQ8 909 aa7.95□□□□□ -1.14
VPS50-212ENST00000476413 CD276Q5ZPR3 534 aa7.95□□□□□ -1.14
VPS50-212ENST00000476413 PGM2L1Q6PCE3 622 aa7.95□□□□□ -1.14
VPS50-212ENST00000476413 TEPPQ6URK8 271 aa7.95□□□□□ -1.14
VPS50-212ENST00000476413 NME9Q86XW9 330 aa7.95□□□□□ -1.14
VPS50-212ENST00000476413 TGFBRAP1Q8WUH2 860 aa7.95□□□□□ -1.14
VPS50-212ENST00000476413 JPH3Q8WXH2 748 aaPredicted RBP7.95□□□□□ -1.14
VPS50-212ENST00000476413 SLC6A17Q9H1V8 727 aa7.95□□□□□ -1.14
VPS50-212ENST00000476413 POFUT1Q9H488 388 aa7.95□□□□□ -1.14
VPS50-212ENST00000476413 RBPJLQ9UBG7 517 aa7.95□□□□□ -1.14
VPS50-212ENST00000476413 IP6K2Q9UHH9 426 aa7.95□□□□□ -1.14
VPS50-212ENST00000476413 PPP2R3BQ9Y5P8 575 aa7.95□□□□□ -1.14
VPS50-212ENST00000476413 OR14I1A6ND48 311 aa7.94□□□□□ -1.14
VPS50-212ENST00000476413 CFBP00751 764 aa7.94□□□□□ -1.14
VPS50-212ENST00000476413 PRLP01236 227 aa7.94□□□□□ -1.14
VPS50-212ENST00000476413 ZSCAN20P17040 1043 aaPredicted RBP7.94□□□□□ -1.14
VPS50-212ENST00000476413 MYBPC3Q14896 1274 aa7.94□□□□□ -1.14
VPS50-212ENST00000476413 FSCN1Q16658 493 aaKnown RBP7.94□□□□□ -1.14
VPS50-212ENST00000476413 ARTNQ5T4W7 220 aa7.94□□□□□ -1.14
VPS50-212ENST00000476413 FAM102BQ5T8I3 360 aa7.94□□□□□ -1.14
VPS50-212ENST00000476413 NXNQ6DKJ4 435 aa7.94□□□□□ -1.14
VPS50-212ENST00000476413 ZC3H14Q6PJT7 736 aaKnown RBP7.94□□□□□ -1.14
VPS50-212ENST00000476413 AMIGO3Q86WK7 504 aa7.94□□□□□ -1.14
VPS50-212ENST00000476413 IRF2BP1Q8IU81 584 aa7.94□□□□□ -1.14
VPS50-212ENST00000476413 PHYKPLQ8IUZ5 450 aa7.94□□□□□ -1.14
VPS50-212ENST00000476413 WDR75Q8IWA0 830 aaKnown RBP7.94□□□□□ -1.14
VPS50-212ENST00000476413 CPA6Q8N4T0 437 aa7.94□□□□□ -1.14
VPS50-212ENST00000476413 TOE1Q96GM8 510 aaKnown RBP7.94□□□□□ -1.14
VPS50-212ENST00000476413 ACAP3Q96P50 834 aa7.94□□□□□ -1.14
VPS50-212ENST00000476413 LUC7LQ9NQ29 371 aaKnown RBP7.94□□□□□ -1.14
VPS50-212ENST00000476413 OAS3Q9Y6K5 1087 aaKnown RBP7.94□□□□□ -1.14
VPS50-212ENST00000476413 UBA6A0AVT1 1052 aaPredicted RBP7.93□□□□□ -1.14
VPS50-212ENST00000476413 PRAMEF22A3QJZ6 481 aa7.93□□□□□ -1.14
VPS50-212ENST00000476413 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.93□□□□□ -1.14
VPS50-212ENST00000476413 ENPP1P22413 925 aa7.93□□□□□ -1.14
VPS50-212ENST00000476413 STAT5AP42229 794 aa7.93□□□□□ -1.14
VPS50-212ENST00000476413 RECQLP46063 649 aaPredicted RBP7.93□□□□□ -1.14
VPS50-212ENST00000476413 TBX4P57082 545 aa7.93□□□□□ -1.14
VPS50-212ENST00000476413 PRAMEF18Q5VWM3 479 aa7.93□□□□□ -1.14
VPS50-212ENST00000476413 C14orf80Q86SX3 495 aa7.93□□□□□ -1.14
VPS50-212ENST00000476413 TCEAL8Q8IYN2 117 aa7.93□□□□□ -1.14
VPS50-212ENST00000476413 MYO1HQ8N1T3 1032 aa7.93□□□□□ -1.14
VPS50-212ENST00000476413 C7orf31Q8N865 590 aa7.93□□□□□ -1.14
VPS50-212ENST00000476413 ERCC4Q92889 916 aaPredicted RBP7.93□□□□□ -1.14
VPS50-212ENST00000476413 AMNQ9BXJ7 453 aa7.93□□□□□ -1.14
VPS50-212ENST00000476413 PRDM12Q9H4Q4 367 aa7.93□□□□□ -1.14
VPS50-212ENST00000476413 MKS1Q9NXB0 559 aa7.93□□□□□ -1.14
VPS50-212ENST00000476413 TMPRSS11EQ9UL52 423 aa7.93□□□□□ -1.14
VPS50-212ENST00000476413 NFIBO00712 420 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 ZRANB2O95218 330 aaKnown RBP eCLIP7.92□□□□□ -1.14
VPS50-212ENST00000476413 GLI1P08151 1106 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 CLEC2LP0C7M8 214 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 PDE6BP35913 854 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 MTNR1BP49286 362 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 HTRA3P83110 453 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 ALDH6A1Q02252 535 aaKnown RBP7.92□□□□□ -1.14
VPS50-212ENST00000476413 CT83Q5H943 113 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 LIPIQ6XZB0 460 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 ETV3LQ6ZN32 361 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 ESPNLQ6ZVH7 1005 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 KANSL1Q7Z3B3 1105 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 KCNK18Q7Z418 384 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 LYSMD2Q8IV50 215 aa7.92□□□□□ -1.14
VPS50-212ENST00000476413 CMTR2Q8IYT2 770 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms