RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-208	ENST00000471894	DUSP11	O75319	330 aa	Known RBP	11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	PPFIA4	O75335	1185 aa		11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	LYPLA2	O95372	231 aa		11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	EYA4	O95677	639 aa		11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	INHA	P05111	366 aa		11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	HSPA1A	P0DMV8	641 aa	Known RBP	11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	HSPA1B	P0DMV9	641 aa	Known RBP	11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	XRCC6	P12956	609 aa	Known RBP eCLIP	11.76	□□□□□ -0.53	2e-23	■■■■□ 23.7
PUM1-208	ENST00000471894	CCND3	P30281	292 aa	Predicted RBP	11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	CTCF	P49711	727 aa	Predicted RBP	11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	LBX1	P52954	281 aa		11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	MDM2	Q00987	491 aa	Predicted RBP	11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	PNOC	Q13519	176 aa		11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	POSTN	Q15063	836 aa		11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	DGKD	Q16760	1214 aa		11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	BRDT	Q58F21	947 aa	Predicted RBP	11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	OTUD6A	Q7L8S5	288 aa		11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	SH3RF1	Q7Z6J0	888 aa		11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	TLK2	Q86UE8	772 aa		11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	LENG1	Q96BZ8	264 aa	Predicted RBP	11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	PCYT2	Q99447	389 aa		11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	LRRC27	Q9C0I9	530 aa		11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	SMARCAD1	Q9H4L7	1026 aa		11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	KBTBD4	Q9NVX7	518 aa		11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.76	□□□□□ -0.53
PUM1-208	ENST00000471894	CEP350	Q5VT06	3117 aa		11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	ARHGEF35	A5YM69	484 aa		11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	GTPBP6	O43824	516 aa	Predicted RBP	11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	ZNF862	O60290	1169 aa		11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	LGR5	O75473	907 aa		11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	MMP3	P08254	477 aa		11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	RARB	P10826	455 aa		11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	YWHAB	P31946	246 aa	Known RBP	11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	ZSCAN23	Q3MJ62	389 aa		11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	XKR3	Q5GH77	459 aa		11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	MAP3K21	Q5TCX8	1036 aa		11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	PLPPR4	Q7Z2D5	763 aa		11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	SYT2	Q8N9I0	419 aa	Predicted RBP	11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	AFAP1L1	Q8TED9	768 aa		11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	ERCC4	Q92889	916 aa	Predicted RBP	11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	CCDC43	Q96MW1	224 aa	Known RBP	11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	MTR	Q99707	1265 aa		11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	BHMT2	Q9H2M3	363 aa		11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	SPC25	Q9HBM1	224 aa		11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	HMX1	Q9NP08	348 aa	Predicted RBP	11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	NRBP2	Q9NSY0	501 aa		11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.75	□□□□□ -0.53
PUM1-208	ENST00000471894	ANKEF1	Q9NU02	776 aa		11.75	□□□□□ -0.53
PUM1-208	ENST00000471894		A6NJR5	290 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	SMC2	O95347	1197 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	LGALS2	P05162	132 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	KRT18	P05783	430 aa	Known RBP	11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	PRR29	P0C7W0	189 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	MARK3	P27448	753 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	CASP1	P29466	404 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	CPT1A	P50416	773 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	SLC12A3	P55017	1021 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	PRKCE	Q02156	737 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	CUL4B	Q13620	913 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	XKR9	Q5GH70	373 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	CTU1	Q7Z7A3	348 aa	Known RBP	11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	GPBP1	Q86WP2	473 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	SH3TC2	Q8TF17	1288 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	SMARCE1	Q969G3	411 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	C7orf25	Q9BPX7	421 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	BLZF1	Q9H2G9	400 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	KIAA1468	Q9P260	1216 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	DBR1	Q9UK59	544 aa	Known RBP	11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	PCDHA5	Q9Y5H7	936 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	EMSY	Q7Z589	1322 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	IGSF9B	Q9UPX0	1349 aa		11.74	□□□□□ -0.53
PUM1-208	ENST00000471894	SYCE3	A1L190	88 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	TMEM150B	A6NC51	233 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	MYMK	A6NI61	221 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	ZEB2	O60315	1214 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	STBD1	O95210	358 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	PGK1	P00558	417 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	OAT	P04181	439 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	MYL1	P05976	194 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	MYL3	P08590	195 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	C6orf222	P0C671	652 aa	Predicted RBP	11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	HOXD8	P13378	290 aa	Predicted RBP	11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	ATP4A	P20648	1035 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	RARRES1	P49788	294 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	SLC26A2	P50443	739 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	NPEPPS	P55786	919 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	GJA9	P57773	515 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	BEX3	Q00994	111 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	DPYD	Q12882	1025 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	FSCN1	Q16658	493 aa	Known RBP	11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	SLC9C1	Q4G0N8	1177 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	GNAS	Q5JWF2	1037 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	RINT1	Q6NUQ1	792 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	SASS6	Q6UVJ0	657 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	ANO5	Q75V66	913 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	DYM	Q7RTS9	669 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	TRIM50	Q86XT4	487 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	DDX12P	Q92771	950 aa		11.73	□□□□□ -0.53
PUM1-208	ENST00000471894	FAM167A	Q96KS9	214 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms