RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 C1orf186Q6ZWK4 172 aa14.21□□□□□ -0.13
TRAF4-208ENST00000469529 UNC13DQ70J99 1090 aa14.21□□□□□ -0.13
TRAF4-208ENST00000469529 EEPD1Q7L9B9 569 aa14.21□□□□□ -0.13
TRAF4-208ENST00000469529 FBXO16Q8IX29 292 aaPredicted RBP14.21□□□□□ -0.13
TRAF4-208ENST00000469529 DHX37Q8IY37 1157 aaKnown RBP14.21□□□□□ -0.13
TRAF4-208ENST00000469529 GRAMD1CQ8IYS0 662 aa14.21□□□□□ -0.13
TRAF4-208ENST00000469529 DDX12PQ92771 950 aa14.21□□□□□ -0.13
TRAF4-208ENST00000469529 CCDC47Q96A33 483 aaKnown RBP14.21□□□□□ -0.13
TRAF4-208ENST00000469529 GPR20Q99678 358 aa14.21□□□□□ -0.13
TRAF4-208ENST00000469529 NIFKQ9BYG3 293 aaKnown RBP14.21□□□□□ -0.13
TRAF4-208ENST00000469529 NAT10Q9H0A0 1025 aaKnown RBP14.21□□□□□ -0.13
TRAF4-208ENST00000469529 FLRT1Q9NZU1 646 aa14.21□□□□□ -0.13
TRAF4-208ENST00000469529 IGSF9BQ9UPX0 1349 aa14.2□□□□□ -0.14
TRAF4-208ENST00000469529 CYP2B6P20813 491 aa14.2□□□□□ -0.14
TRAF4-208ENST00000469529 GUCY2CP25092 1073 aa14.2□□□□□ -0.14
TRAF4-208ENST00000469529 YWHABP31946 246 aaKnown RBP14.2□□□□□ -0.14
TRAF4-208ENST00000469529 PPP1R2P41236 205 aa14.2□□□□□ -0.14
TRAF4-208ENST00000469529 FLT3LGP49771 235 aa14.2□□□□□ -0.14
TRAF4-208ENST00000469529 NKX3-2P78367 333 aa14.2□□□□□ -0.14
TRAF4-208ENST00000469529 CYP4A11Q02928 519 aa14.2□□□□□ -0.14
TRAF4-208ENST00000469529 UVSSAQ2YD98 709 aa14.2□□□□□ -0.14
TRAF4-208ENST00000469529 ZNF658Q5TYW1 1059 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-208ENST00000469529 RINT1Q6NUQ1 792 aa14.2□□□□□ -0.14
TRAF4-208ENST00000469529 BANK1Q8NDB2 785 aa14.2□□□□□ -0.14
TRAF4-208ENST00000469529 PPTC7Q8NI37 304 aa14.2□□□□□ -0.14
TRAF4-208ENST00000469529 STAMQ92783 540 aa14.2□□□□□ -0.14
TRAF4-208ENST00000469529 PCYT2Q99447 389 aa14.2□□□□□ -0.14
TRAF4-208ENST00000469529 BHMT2Q9H2M3 363 aa14.2□□□□□ -0.14
TRAF4-208ENST00000469529 SRRDQ9UH36 339 aa14.2□□□□□ -0.14
TRAF4-208ENST00000469529 DACH1Q9UI36 760 aa14.2□□□□□ -0.14
TRAF4-208ENST00000469529 GNEQ9Y223 722 aaKnown RBP14.2□□□□□ -0.14
TRAF4-208ENST00000469529 PTPN22Q9Y2R2 807 aa14.2□□□□□ -0.14
TRAF4-208ENST00000469529 GOLGA6L3A6NEY3 463 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 ZNF862O60290 1169 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 ERCC5P28715 1186 aaPredicted RBP14.19□□□□□ -0.14
TRAF4-208ENST00000469529 RARRES1P49788 294 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 STAT5BP51692 787 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 GIT2Q14161 759 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 CCDC144BQ3MJ40 725 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 FAM160B1Q5W0V3 765 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 FOXR2Q6PJQ5 311 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 ANO5Q75V66 913 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 FAM200AQ8TCP9 573 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 PXYLP1Q8TE99 480 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 PIGOQ8TEQ8 1089 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 ERCC4Q92889 916 aaPredicted RBP14.19□□□□□ -0.14
TRAF4-208ENST00000469529 ARHGAP39Q9C0H5 1083 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 BLZF1Q9H2G9 400 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 ZNF302Q9NR11 478 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 PDLIM7Q9NR12 457 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 NRBP2Q9NSY0 501 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 GABBR1Q9UBS5 961 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 ODF2LQ9ULJ1 636 aa14.19□□□□□ -0.14
TRAF4-208ENST00000469529 EMSYQ7Z589 1322 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 ZNFX1Q9P2E3 1918 aaKnown RBP14.18□□□□□ -0.14
TRAF4-208ENST00000469529 A6NJR5 290 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 ZBTB39O15060 712 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 SMPD1P17405 629 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 GAP43P17677 238 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 ATP4AP20648 1035 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 ADCYAP1R1P41586 468 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 ZNF165P49910 485 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 MRE11P49959 708 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 ZNF131P52739 623 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 TNFAIP2Q03169 654 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 CCL14Q16627 93 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 HSDL1Q3SXM5 330 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 KMT5BQ4FZB7 885 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 ANO6Q4KMQ2 910 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 MFSD14CQ5VZR4 134 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 GPBP1Q86WP2 473 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 CCDC60Q8IWA6 550 aaPredicted RBP14.18□□□□□ -0.14
TRAF4-208ENST00000469529 CCDC65Q8IXS2 484 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 EXOC8Q8IYI6 725 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 FAM167AQ96KS9 214 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 SPATA33Q96N06 139 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 SMARCAD1Q9H4L7 1026 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 SEL1LQ9UBV2 794 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 KCNG1Q9UIX4 513 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 FAM184BQ9ULE4 1060 aa14.18□□□□□ -0.14
TRAF4-208ENST00000469529 ARHGEF35A5YM69 484 aa14.17□□□□□ -0.14
TRAF4-208ENST00000469529 PPP1R3GB7ZBB8 358 aa14.17□□□□□ -0.14
TRAF4-208ENST00000469529 IKBKBO14920 756 aa14.17□□□□□ -0.14
TRAF4-208ENST00000469529 CASP1P29466 404 aa14.17□□□□□ -0.14
TRAF4-208ENST00000469529 TCF7P36402 384 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-208ENST00000469529 ASIC1P78348 528 aa14.17□□□□□ -0.14
TRAF4-208ENST00000469529 PRKCZQ05513 592 aa14.17□□□□□ -0.14
TRAF4-208ENST00000469529 IQCB1Q15051 598 aa14.17□□□□□ -0.14
TRAF4-208ENST00000469529 TARBP2Q15633 366 aaKnown RBP14.17□□□□□ -0.14
TRAF4-208ENST00000469529 UGCGQ16739 394 aa14.17□□□□□ -0.14
TRAF4-208ENST00000469529 DPCR1Q3MIW9 517 aa14.17□□□□□ -0.14
TRAF4-208ENST00000469529 PADI6Q6TGC4 694 aa14.17□□□□□ -0.14
TRAF4-208ENST00000469529 BBXQ8WY36 941 aaPredicted RBP14.17□□□□□ -0.14
TRAF4-208ENST00000469529 KCNN1Q92952 543 aa14.17□□□□□ -0.14
TRAF4-208ENST00000469529 CEP89Q96ST8 783 aa14.17□□□□□ -0.14
TRAF4-208ENST00000469529 RBSNQ9H1K0 784 aa14.17□□□□□ -0.14
TRAF4-208ENST00000469529 AZI2Q9H6S1 392 aa14.17□□□□□ -0.14
TRAF4-208ENST00000469529 GABRQQ9UN88 632 aa14.17□□□□□ -0.14
TRAF4-208ENST00000469529 TELO2Q9Y4R8 837 aa14.17□□□□□ -0.14
TRAF4-208ENST00000469529 PCDHA2Q9Y5H9 948 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 729.9 ms