RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 FBXO41Q8TF61 875 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 RAPGEF5Q92565 580 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 ZKSCAN4Q969J2 545 aaPredicted RBP12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 IKZF4Q9H2S9 585 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 ZNF287Q9HBT7 754 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 MEIS1O00470 390 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 RASSF9O75901 435 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 GNA14O95837 355 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 KRT18P05783 430 aaKnown RBP12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 PON1P27169 355 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 SMARCA1P28370 1054 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 HOXD13P35453 343 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 RHBDL3P58872 404 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 MAGOHP61326 146 aaKnown RBP12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 PSMC6P62333 389 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 MDM1Q8TC05 714 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 MAGOHBQ96A72 148 aaKnown RBP12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 PBKQ96KB5 322 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 LEMD3Q9Y2U8 911 aa12.82□□□□□ -0.36
PDZRN3-203ENST00000462146 PHF20L1A8MW92 1017 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 USP17L15C9J2P7 530 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 USP17L13C9JLJ4 530 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 USP17L11C9JVI0 530 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 USP17L18D6R9N7 530 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 USP17L22D6RA61 530 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 USP17L17D6RBQ6 530 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 USP17L19D6RCP7 530 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 USP17L20D6RJB6 530 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 MAP2K2P36507 400 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 CASP4P49662 377 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 PPP2R2AP63151 447 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 USP17L24Q0WX57 530 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 USP17L6PQ6QN14 398 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 PEX26Q7Z412 305 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 TMC3Q7Z5M5 1100 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 LRRC45Q96CN5 670 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 NYXQ9GZU5 481 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 OSGEPQ9NPF4 335 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 BMP2KQ9NSY1 1161 aaPredicted RBP12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 MTMR4Q9NYA4 1195 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 FOCADQ5VW36 1801 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 BTNL10A8MVZ5 291 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 CES2O00748 559 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 CETN3O15182 167 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 NT5C2P49902 561 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 DDR1Q08345 913 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 TCERG1LQ5VWI1 586 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 DPP8Q6V1X1 898 aaPredicted RBP12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 CCDC121Q6ZUS5 278 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 KCTD1Q719H9 257 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 ZC3H3Q8IXZ2 948 aaKnown RBP12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 SEC16BQ96JE7 1060 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 HAUS2Q9NVX0 235 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 STXBP5LQ9Y2K9 1186 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 SPATA31A6Q5VVP1 1343 aa12.81□□□□□ -0.36
PDZRN3-203ENST00000462146 GPR75-ASB3A0A0A6YYF3 556 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 USP17L10C9JJH3 530 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 OPLAHO14841 1288 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 NOVP48745 357 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 DHX9Q08211 1270 aaKnown RBP12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 KRT71Q3SY84 523 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 DAAM2Q86T65 1068 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 ARFGAP2Q8N6H7 521 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 CCDC114Q96M63 670 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 SIX2Q9NPC8 291 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 RTCBQ9Y3I0 505 aaKnown RBP12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 RSPH10B2B2RC85 870 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 DDX3XO00571 662 aaKnown RBP eCLIP12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 AKAP3O75969 853 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 LDHCP07864 332 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 RSPH10BP0C881 870 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 SMTNP53814 917 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 SLC12A3P55017 1021 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 KCNA1Q09470 495 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 SEPT2Q15019 361 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 EXOC3L4Q17RC7 722 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 HYIQ5T013 277 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 UBAP2Q5T6F2 1119 aaKnown RBP12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 NT5DC3Q86UY8 548 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 SFR1Q86XK3 245 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 U2AF1L4Q8WU68 220 aaKnown RBP12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 CXorf56Q9H5V9 222 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 NENFQ9UMX5 172 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 ATP8A1Q9Y2Q0 1164 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 IGSF9BQ9UPX0 1349 aa12.8□□□□□ -0.36
PDZRN3-203ENST00000462146 GOLGA6L7A0A1B0GV03 622 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 F8VZ95 297 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 hCG_1984214I3L0E3 225 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 CLIC2O15247 247 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 AFPP02771 609 aaKnown RBP12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 SETQ01105 290 aaPredicted RBP12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 PABPC4Q13310 644 aaKnown RBP eCLIP12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 ASPRV1Q53RT3 343 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 ANKRD20A8PQ5CZ79 823 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 DCAF12L1Q5VU92 463 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 TPTE2Q6XPS3 522 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 ZNF804AQ7Z570 1209 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 FAM228AQ86W67 206 aa12.79□□□□□ -0.36
PDZRN3-203ENST00000462146 ZNF713Q8N859 430 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 296.1 ms