RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 NSRP1Q9H0G5 558 aaKnown RBP14.94□□□□□ -0.02
PTPRE-204ENST00000455661 SLC12A4Q9UP95 1085 aa14.94□□□□□ -0.02
PTPRE-204ENST00000455661 POTEMA6NI47 508 aa14.94□□□□□ -0.02
PTPRE-204ENST00000455661 CCDC169A6NNP5 214 aa14.94□□□□□ -0.02
PTPRE-204ENST00000455661 NTSR2O95665 410 aa14.94□□□□□ -0.02
PTPRE-204ENST00000455661 ANXA13P27216 316 aa14.94□□□□□ -0.02
PTPRE-204ENST00000455661 PPP2R5EQ16537 467 aa14.94□□□□□ -0.02
PTPRE-204ENST00000455661 TMEM119Q4V9L6 283 aa14.94□□□□□ -0.02
PTPRE-204ENST00000455661 IRF2BP2Q7Z5L9 587 aa14.94□□□□□ -0.02
PTPRE-204ENST00000455661 PIGWQ7Z7B1 504 aa14.94□□□□□ -0.02
PTPRE-204ENST00000455661 DAAM2Q86T65 1068 aa14.94□□□□□ -0.02
PTPRE-204ENST00000455661 PNMA8AQ86V59 439 aaPredicted RBP14.94□□□□□ -0.02
PTPRE-204ENST00000455661 DYNLL2Q96FJ2 89 aa14.94□□□□□ -0.02
PTPRE-204ENST00000455661 EBF2Q9HAK2 575 aa14.94□□□□□ -0.02
PTPRE-204ENST00000455661 GOPCQ9HD26 462 aa14.94□□□□□ -0.02
PTPRE-204ENST00000455661 BSDC1Q9NW68 430 aaPredicted RBP14.94□□□□□ -0.02
PTPRE-204ENST00000455661 NIP7Q9Y221 180 aaKnown RBP eCLIP14.94□□□□□ -0.02
PTPRE-204ENST00000455661 WTIPA6NIX2 430 aaPredicted RBP14.93□□□□□ -0.02
PTPRE-204ENST00000455661 KCNH2Q12809 1159 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 ADAM9Q13443 819 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 SLMAPQ14BN4 828 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 NELFCDQ8IXH7 590 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 CCDC65Q8IXS2 484 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 CELF4Q9BZC1 486 aaKnown RBP14.93□□□□□ -0.02
PTPRE-204ENST00000455661 TRIM31Q9BZY9 425 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 KANSL2Q9H9L4 492 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 KIAA1551Q9HCM1 1747 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 BCL9O00512 1426 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 ATP8B3O60423 1300 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 A0A0A6YYK5 440 aaPredicted RBP14.93□□□□□ -0.02
PTPRE-204ENST00000455661 CETN3O15182 167 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 RTN2O75298 545 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 ECM2O94769 699 aaPredicted RBP14.93□□□□□ -0.02
PTPRE-204ENST00000455661 H2AFZP0C0S5 128 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 ZBTB48P10074 688 aaPredicted RBP14.93□□□□□ -0.02
PTPRE-204ENST00000455661 DENND2CQ68D51 928 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 H2AFVQ71UI9 128 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 TRPM8Q7Z2W7 1104 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 FBXO33Q7Z6M2 555 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 SLFN11Q7Z7L1 901 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 CROCCP2Q86T23 111 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 TBC1D1Q86TI0 1168 aaPredicted RBP14.93□□□□□ -0.02
PTPRE-204ENST00000455661 NSMCE1Q8WV22 266 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 DNAJC19Q96DA6 116 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 PGM2Q96G03 612 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 TBC1D7Q9P0N9 293 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 AMFRQ9UKV5 643 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 STXBP5LQ9Y2K9 1186 aa14.93□□□□□ -0.02
PTPRE-204ENST00000455661 ITGB4P16144 1822 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 RGS16O15492 202 aaPredicted RBP14.92□□□□□ -0.02
PTPRE-204ENST00000455661 NUDT17P0C025 328 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 MMP13P45452 471 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 PMS2P54278 862 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 NPEPPSP55786 919 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 MYO1EQ12965 1108 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 ZKSCAN8Q15776 578 aaPredicted RBP14.92□□□□□ -0.02
PTPRE-204ENST00000455661 ACCSLQ4AC99 568 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 KCNK18Q7Z418 384 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 NEK9Q8TD19 979 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 STAMBPL1Q96FJ0 436 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 NUDT12Q9BQG2 462 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 CPVLQ9H3G5 476 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 VAT1LQ9HCJ6 419 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 INTS9Q9NV88 658 aaKnown RBP14.92□□□□□ -0.02
PTPRE-204ENST00000455661 TMEM260Q9NX78 707 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 MINPP1Q9UNW1 487 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 GOLGA6L10A0A0M3HER8 536 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 ESYT2A0FGR8 921 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 TLDC2A0PJX2 215 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 VIMP08670 466 aaKnown RBP14.92□□□□□ -0.02
PTPRE-204ENST00000455661 PRDX5P30044 214 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 NT5DC3Q86UY8 548 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 DZIP1Q86YF9 867 aaKnown RBP14.92□□□□□ -0.02
PTPRE-204ENST00000455661 LRRC34Q8IZ02 419 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 NAP1L3Q99457 506 aaPredicted RBP14.92□□□□□ -0.02
PTPRE-204ENST00000455661 ELAC2Q9BQ52 826 aaKnown RBP14.92□□□□□ -0.02
PTPRE-204ENST00000455661 TRIM51Q9BSJ1 452 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 TXLNGYQ9BZA5 131 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 PABPC3Q9H361 631 aaKnown RBP14.92□□□□□ -0.02
PTPRE-204ENST00000455661 HDAC9Q9UKV0 1011 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 INTUQ9ULD6 942 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 TTC7AQ9ULT0 858 aaPredicted RBP14.92□□□□□ -0.02
PTPRE-204ENST00000455661 DIS3Q9Y2L1 958 aaKnown RBP14.92□□□□□ -0.02
PTPRE-204ENST00000455661 C15orf41Q9Y2V0 281 aa14.92□□□□□ -0.02
PTPRE-204ENST00000455661 SLC37A4O43826 429 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 MARCH6O60337 910 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 ANP32DO95626 131 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 FGGP02679 453 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 ACTN1P12814 892 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 UCHL3P15374 230 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 PRKCIP41743 596 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 IRX1P78414 480 aaPredicted RBP14.91□□□□□ -0.02
PTPRE-204ENST00000455661 DR1Q01658 176 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 FAM133BQ5BKY9 247 aaKnown RBP14.91□□□□□ -0.02
PTPRE-204ENST00000455661 C6orf118Q5T5N4 469 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 ATXN2LQ8WWM7 1075 aaKnown RBP14.91□□□□□ -0.02
PTPRE-204ENST00000455661 HES6Q96HZ4 224 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 STMN4Q9H169 189 aaPredicted RBP14.91□□□□□ -0.02
PTPRE-204ENST00000455661 ZNF287Q9HBT7 754 aa14.91□□□□□ -0.02
PTPRE-204ENST00000455661 EMILIN3Q9NT22 766 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms