RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 PTPROQ16827 1216 aa6.54□□□□□ -1.36
USP25-206ENST00000453553 ZNF385BQ569K4 471 aa6.54□□□□□ -1.36
USP25-206ENST00000453553 CATSPEREQ5SY80 951 aa6.54□□□□□ -1.36
USP25-206ENST00000453553 EFHBQ8N7U6 833 aa6.54□□□□□ -1.36
USP25-206ENST00000453553 TTLL6Q8N841 843 aa6.54□□□□□ -1.36
USP25-206ENST00000453553 ZCRB1Q8TBF4 217 aaKnown RBP6.54□□□□□ -1.36
USP25-206ENST00000453553 FNIP1Q8TF40 1166 aa6.54□□□□□ -1.36
USP25-206ENST00000453553 ASB15Q8WXK1 588 aa6.54□□□□□ -1.36
USP25-206ENST00000453553 SCYL1Q96KG9 808 aa6.54□□□□□ -1.36
USP25-206ENST00000453553 PWWP2AQ96N64 755 aa6.54□□□□□ -1.36
USP25-206ENST00000453553 GBP4Q96PP9 640 aa6.54□□□□□ -1.36
USP25-206ENST00000453553 TMEM209Q96SK2 561 aa6.54□□□□□ -1.36
USP25-206ENST00000453553 FAM126AQ9BYI3 521 aaPredicted RBP6.54□□□□□ -1.36
USP25-206ENST00000453553 SLC39A2Q9NP94 309 aa6.54□□□□□ -1.36
USP25-206ENST00000453553 BTBD7Q9P203 1132 aa6.54□□□□□ -1.36
USP25-206ENST00000453553 ARHGAP28Q9P2N2 729 aa6.54□□□□□ -1.36
USP25-206ENST00000453553 NPIPB6E9PJ23 425 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 GOLGA6L22H0YM25 854 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 NEMP1O14524 444 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 TGM5O43548 720 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 BRINP1O60477 761 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 AOAHP28039 575 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 FNTBP49356 437 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 LINC00310P59036 64 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 CAP1Q01518 475 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 C11orf74Q86VG3 221 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 DTX3Q8N9I9 347 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 IGDCC4Q8TDY8 1250 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 ZBTB8AQ96BR9 441 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 KRTAP17-1Q9BYP8 105 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 BRINP2Q9C0B6 783 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 PCDH12Q9NPG4 1184 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 DLL4Q9NR61 685 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 ASB1Q9Y576 335 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 COL4A3BPQ9Y5P4 624 aa6.53□□□□□ -1.36
USP25-206ENST00000453553 PRAMEF22A3QJZ6 481 aa6.52□□□□□ -1.37
USP25-206ENST00000453553 RFXAPO00287 272 aa6.52□□□□□ -1.37
USP25-206ENST00000453553 PTGS1P23219 599 aa6.52□□□□□ -1.37
USP25-206ENST00000453553 PTX3P26022 381 aaPredicted RBP6.52□□□□□ -1.37
USP25-206ENST00000453553 ID4P47928 161 aa6.52□□□□□ -1.37
USP25-206ENST00000453553 SMAD4Q13485 552 aaKnown RBP6.52□□□□□ -1.37
USP25-206ENST00000453553 SKIDA1Q1XH10 827 aa6.52□□□□□ -1.37
USP25-206ENST00000453553 KRTAP19-4Q3LI73 84 aa6.52□□□□□ -1.37
USP25-206ENST00000453553 PRAMEF18Q5VWM3 479 aa6.52□□□□□ -1.37
USP25-206ENST00000453553 DDX42Q86XP3 938 aaKnown RBP eCLIP6.52□□□□□ -1.37
USP25-206ENST00000453553 ATL2Q8NHH9 583 aa6.52□□□□□ -1.37
USP25-206ENST00000453553 DACT3Q96B18 629 aaPredicted RBP6.52□□□□□ -1.37
USP25-206ENST00000453553 C16orf92Q96LL3 132 aa6.52□□□□□ -1.37
USP25-206ENST00000453553 CLIC6Q96NY7 704 aa6.52□□□□□ -1.37
USP25-206ENST00000453553 EMC7Q9NPA0 242 aa6.52□□□□□ -1.37
USP25-206ENST00000453553 TOMM22Q9NS69 142 aa6.52□□□□□ -1.37
USP25-206ENST00000453553 SPATA6Q9NWH7 488 aaPredicted RBP6.52□□□□□ -1.37
USP25-206ENST00000453553 ATP8A1Q9Y2Q0 1164 aa6.52□□□□□ -1.37
USP25-206ENST00000453553 IBSPP21815 317 aaPredicted RBP6.51□□□□□ -1.37
USP25-206ENST00000453553 THBS2P35442 1172 aa6.51□□□□□ -1.37
USP25-206ENST00000453553 SMAD3P84022 425 aaKnown RBP6.51□□□□□ -1.37
USP25-206ENST00000453553 STAT4Q14765 748 aa6.51□□□□□ -1.37
USP25-206ENST00000453553 EPHA7Q15375 998 aa6.51□□□□□ -1.37
USP25-206ENST00000453553 SMAD2Q15796 467 aaKnown RBP6.51□□□□□ -1.37
USP25-206ENST00000453553 ATP13A4Q4VNC1 1196 aa6.51□□□□□ -1.37
USP25-206ENST00000453553 HIPK4Q8NE63 616 aa6.51□□□□□ -1.37
USP25-206ENST00000453553 FOXRED1Q96CU9 486 aaPredicted RBP6.51□□□□□ -1.37
USP25-206ENST00000453553 GPATCH3Q96I76 525 aa6.51□□□□□ -1.37
USP25-206ENST00000453553 UCKL1Q9NWZ5 548 aa6.51□□□□□ -1.37
USP25-206ENST00000453553 GALNT8Q9NY28 637 aa6.51□□□□□ -1.37
USP25-206ENST00000453553 ARHGAP20Q9P2F6 1191 aa6.51□□□□□ -1.37
USP25-206ENST00000453553 MCM8Q9UJA3 840 aa6.51□□□□□ -1.37
USP25-206ENST00000453553 MPIG6BO95866 241 aa6.5□□□□□ -1.37
USP25-206ENST00000453553 MC4RP32245 332 aa6.5□□□□□ -1.37
USP25-206ENST00000453553 GLRBP48167 497 aa6.5□□□□□ -1.37
USP25-206ENST00000453553 ADCY1Q08828 1119 aa6.5□□□□□ -1.37
USP25-206ENST00000453553 RTP5Q14D33 572 aa6.5□□□□□ -1.37
USP25-206ENST00000453553 TTLL7Q6ZT98 887 aa6.5□□□□□ -1.37
USP25-206ENST00000453553 SAPCD2Q86UD0 394 aa6.5□□□□□ -1.37
USP25-206ENST00000453553 RTN4RL1Q86UN2 441 aaPredicted RBP6.5□□□□□ -1.37
USP25-206ENST00000453553 NME9Q86XW9 330 aa6.5□□□□□ -1.37
USP25-206ENST00000453553 ZZZ3Q8IYH5 903 aa6.5□□□□□ -1.37
USP25-206ENST00000453553 WDR66Q8TBY9 1149 aa6.5□□□□□ -1.37
USP25-206ENST00000453553 ERCC4Q92889 916 aaPredicted RBP6.5□□□□□ -1.37
USP25-206ENST00000453553 ZSWIM3Q96MP5 696 aa6.5□□□□□ -1.37
USP25-206ENST00000453553 WRNIP1Q96S55 665 aa6.5□□□□□ -1.37
USP25-206ENST00000453553 AMNQ9BXJ7 453 aa6.5□□□□□ -1.37
USP25-206ENST00000453553 INCENPQ9NQS7 918 aa6.5□□□□□ -1.37
USP25-206ENST00000453553 CROTQ9UKG9 612 aa6.5□□□□□ -1.37
USP25-206ENST00000453553 APOBEC2Q9Y235 224 aaKnown RBP6.5□□□□□ -1.37
USP25-206ENST00000453553 PHLDB1Q86UU1 1377 aa6.49□□□□□ -1.37
USP25-206ENST00000453553 CYP7B1O75881 506 aa6.49□□□□□ -1.37
USP25-206ENST00000453553 IL18BPO95998 194 aa6.49□□□□□ -1.37
USP25-206ENST00000453553 LSP1P33241 339 aa6.49□□□□□ -1.37
USP25-206ENST00000453553 PHC1P78364 1004 aa6.49□□□□□ -1.37
USP25-206ENST00000453553 DLX2Q07687 328 aaPredicted RBP6.49□□□□□ -1.37
USP25-206ENST00000453553 LRRC32Q14392 662 aa6.49□□□□□ -1.37
USP25-206ENST00000453553 TERF2Q15554 542 aa6.49□□□□□ -1.37
USP25-206ENST00000453553 VWA3BQ502W6 1294 aa6.49□□□□□ -1.37
USP25-206ENST00000453553 PRR31Q5SQ13 230 aa6.49□□□□□ -1.37
USP25-206ENST00000453553 PHF19Q5T6S3 580 aa6.49□□□□□ -1.37
USP25-206ENST00000453553 GPR158Q5T848 1215 aa6.49□□□□□ -1.37
USP25-206ENST00000453553 RNF219Q5W0B1 726 aaPredicted RBP6.49□□□□□ -1.37
USP25-206ENST00000453553 ESRP1Q6NXG1 681 aaKnown RBP6.49□□□□□ -1.37
USP25-206ENST00000453553 LHFPL2Q6ZUX7 228 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms