RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 ESRP1Q6NXG1 681 aaKnown RBP6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 LIPIQ6XZB0 460 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 FERMT3Q86UX7 667 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 RASSF3Q86WH2 238 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 CERS3Q8IU89 383 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 ZZZ3Q8IYH5 903 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 ZNF610Q8N9Z0 462 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 CLRN3Q8NCR9 226 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 COG1Q8WTW3 980 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 PUS7LQ9H0K6 701 aaKnown RBP6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 PCDH18Q9HCL0 1135 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 FAN1Q9Y2M0 1017 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 ASB1Q9Y576 335 aa6.8□□□□□ -1.32
HMGB1P26-201ENST00000452520 ETV2O00321 342 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P26-201ENST00000452520 PDGFRBP09619 1106 aa6.79□□□□□ -1.32
HMGB1P26-201ENST00000452520 BRDTQ58F21 947 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P26-201ENST00000452520 HSP90AB2PQ58FF8 381 aa6.79□□□□□ -1.32
HMGB1P26-201ENST00000452520 XP32Q5T750 250 aa6.79□□□□□ -1.32
HMGB1P26-201ENST00000452520 TMC5Q6UXY8 1006 aa6.79□□□□□ -1.32
HMGB1P26-201ENST00000452520 HDGFL2Q7Z4V5 671 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P26-201ENST00000452520 NME9Q86XW9 330 aa6.79□□□□□ -1.32
HMGB1P26-201ENST00000452520 HIPK4Q8NE63 616 aa6.79□□□□□ -1.32
HMGB1P26-201ENST00000452520 ERCC4Q92889 916 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P26-201ENST00000452520 FOXRED1Q96CU9 486 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P26-201ENST00000452520 TRIM8Q9BZR9 551 aa6.79□□□□□ -1.32
HMGB1P26-201ENST00000452520 VTA1Q9NP79 307 aa6.79□□□□□ -1.32
HMGB1P26-201ENST00000452520 SLC39A2Q9NP94 309 aa6.79□□□□□ -1.32
HMGB1P26-201ENST00000452520 TYW1Q9NV66 732 aaKnown RBP6.79□□□□□ -1.32
HMGB1P26-201ENST00000452520 SLC52A1Q9NWF4 448 aa6.79□□□□□ -1.32
HMGB1P26-201ENST00000452520 ARHGAP28Q9P2N2 729 aa6.79□□□□□ -1.32
HMGB1P26-201ENST00000452520 PRAMEF22A3QJZ6 481 aa6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 ZNF839A8K0R7 811 aa6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 NFIBO00712 420 aa6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 KATNA1O75449 491 aa6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 PRKD3O94806 890 aa6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 CD40P25942 277 aa6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 THBS2P35442 1172 aa6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 ADCY1Q08828 1119 aa6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 MTMR1Q13613 665 aa6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 PRAMEF18Q5VWM3 479 aa6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 VASNQ6EMK4 673 aa6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 SYDE1Q6ZW31 735 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 RTN4RL1Q86UN2 441 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 CILP2Q8IUL8 1156 aa6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 IGDCC4Q8TDY8 1250 aa6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 RTF1Q92541 710 aaKnown RBP6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 ZNF496Q96IT1 587 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 GORASP1Q9BQQ3 440 aa6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 UCKL1Q9NWZ5 548 aa6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 NOC2LQ9Y3T9 749 aaKnown RBP6.78□□□□□ -1.32
HMGB1P26-201ENST00000452520 MPIG6BO95866 241 aa6.77□□□□□ -1.33
HMGB1P26-201ENST00000452520 TMEM253P0C7T8 217 aa6.77□□□□□ -1.33
HMGB1P26-201ENST00000452520 PTGS1P23219 599 aa6.77□□□□□ -1.33
HMGB1P26-201ENST00000452520 GLDCP23378 1020 aa6.77□□□□□ -1.33
HMGB1P26-201ENST00000452520 MC4RP32245 332 aa6.77□□□□□ -1.33
HMGB1P26-201ENST00000452520 EXOSC10Q01780 885 aaKnown RBP6.77□□□□□ -1.33
HMGB1P26-201ENST00000452520 ITKQ08881 620 aa6.77□□□□□ -1.33
HMGB1P26-201ENST00000452520 FRMD7Q6ZUT3 714 aa6.77□□□□□ -1.33
HMGB1P26-201ENST00000452520 STK32CQ86UX6 486 aa6.77□□□□□ -1.33
HMGB1P26-201ENST00000452520 CNTD1Q8N815 330 aa6.77□□□□□ -1.33
HMGB1P26-201ENST00000452520 DTX3Q8N9I9 347 aa6.77□□□□□ -1.33
HMGB1P26-201ENST00000452520 FAM84AQ96KN4 292 aa6.77□□□□□ -1.33
HMGB1P26-201ENST00000452520 NOX5Q96PH1 765 aa6.77□□□□□ -1.33
HMGB1P26-201ENST00000452520 TMEM209Q96SK2 561 aa6.77□□□□□ -1.33
HMGB1P26-201ENST00000452520 ZDHHC5Q9C0B5 715 aa6.77□□□□□ -1.33
HMGB1P26-201ENST00000452520 CCDC8Q9H0W5 538 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P26-201ENST00000452520 MS4A5Q9H3V2 200 aa6.77□□□□□ -1.33
HMGB1P26-201ENST00000452520 GALNT8Q9NY28 637 aa6.77□□□□□ -1.33
HMGB1P26-201ENST00000452520 LCHNA4D1U4 455 aa6.76□□□□□ -1.33
HMGB1P26-201ENST00000452520 K7ESF4 209 aa6.76□□□□□ -1.33
HMGB1P26-201ENST00000452520 FARP2O94887 1054 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P26-201ENST00000452520 LIMS1P48059 325 aa6.76□□□□□ -1.33
HMGB1P26-201ENST00000452520 ITGA1P56199 1179 aa6.76□□□□□ -1.33
HMGB1P26-201ENST00000452520 TMEFF1Q8IYR6 380 aa6.76□□□□□ -1.33
HMGB1P26-201ENST00000452520 LINC00482Q8N8I6 264 aa6.76□□□□□ -1.33
HMGB1P26-201ENST00000452520 JDP2Q8WYK2 163 aa6.76□□□□□ -1.33
HMGB1P26-201ENST00000452520 E2F7Q96AV8 911 aa6.76□□□□□ -1.33
HMGB1P26-201ENST00000452520 AHCYL2Q96HN2 611 aaKnown RBP6.76□□□□□ -1.33
HMGB1P26-201ENST00000452520 SIGLEC10Q96LC7 697 aa6.76□□□□□ -1.33
HMGB1P26-201ENST00000452520 C11orf84Q9BUA3 381 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P26-201ENST00000452520 AMNQ9BXJ7 453 aa6.76□□□□□ -1.33
HMGB1P26-201ENST00000452520 INCENPQ9NQS7 918 aa6.76□□□□□ -1.33
HMGB1P26-201ENST00000452520 DLL4Q9NR61 685 aa6.76□□□□□ -1.33
HMGB1P26-201ENST00000452520 TOPORSQ9NS56 1045 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P26-201ENST00000452520 UBA6A0AVT1 1052 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P26-201ENST00000452520 MED14OSP0DP75 135 aa6.75□□□□□ -1.33
HMGB1P26-201ENST00000452520 ADAM9Q13443 819 aa6.75□□□□□ -1.33
HMGB1P26-201ENST00000452520 SKIDA1Q1XH10 827 aa6.75□□□□□ -1.33
HMGB1P26-201ENST00000452520 TTC38Q5R3I4 469 aa6.75□□□□□ -1.33
HMGB1P26-201ENST00000452520 ODR4Q5SWX8 454 aa6.75□□□□□ -1.33
HMGB1P26-201ENST00000452520 PHYKPLQ8IUZ5 450 aa6.75□□□□□ -1.33
HMGB1P26-201ENST00000452520 KYQ8NBH2 561 aa6.75□□□□□ -1.33
HMGB1P26-201ENST00000452520 TUBGCP5Q96RT8 1024 aa6.75□□□□□ -1.33
HMGB1P26-201ENST00000452520 FOXB1Q99853 325 aa6.75□□□□□ -1.33
HMGB1P26-201ENST00000452520 MENTQ9BUN1 341 aa6.75□□□□□ -1.33
HMGB1P26-201ENST00000452520 USP36Q9P275 1121 aaKnown RBP6.75□□□□□ -1.33
HMGB1P26-201ENST00000452520 ARHGAP20Q9P2F6 1191 aa6.75□□□□□ -1.33
HMGB1P26-201ENST00000452520 MSRAQ9UJ68 235 aa6.75□□□□□ -1.33
HMGB1P26-201ENST00000452520 RNF114Q9Y508 228 aa6.75□□□□□ -1.33
HMGB1P26-201ENST00000452520 IRAK3Q9Y616 596 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms