RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 KIAA1468Q9P260 1216 aa23.54■■□□□ 1.36
VPS13B-204ENST00000441350 DBR1Q9UK59 544 aaKnown RBP23.54■■□□□ 1.36
VPS13B-204ENST00000441350 EMSYQ7Z589 1322 aa23.53■■□□□ 1.36
VPS13B-204ENST00000441350 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.53■■□□□ 1.36
VPS13B-204ENST00000441350 DYNC1LI2O43237 492 aaPredicted RBP23.53■■□□□ 1.36
VPS13B-204ENST00000441350 GTPBP6O43824 516 aaPredicted RBP23.53■■□□□ 1.36
VPS13B-204ENST00000441350 DUSP11O75319 330 aaKnown RBP23.53■■□□□ 1.36
VPS13B-204ENST00000441350 PPFIA4O75335 1185 aa23.53■■□□□ 1.36
VPS13B-204ENST00000441350 MYL1P05976 194 aa23.53■■□□□ 1.36
VPS13B-204ENST00000441350 HSPA8P11142 646 aaKnown RBP23.53■■□□□ 1.36
VPS13B-204ENST00000441350 ATP4AP20648 1035 aa23.53■■□□□ 1.36
VPS13B-204ENST00000441350 STAT5BP51692 787 aa23.53■■□□□ 1.36
VPS13B-204ENST00000441350 AMPD3Q01432 767 aa23.53■■□□□ 1.36
VPS13B-204ENST00000441350 DPYDQ12882 1025 aa23.53■■□□□ 1.36
VPS13B-204ENST00000441350 FAM160B1Q5W0V3 765 aa23.53■■□□□ 1.36
VPS13B-204ENST00000441350 TLK2Q86UE8 772 aa23.53■■□□□ 1.36
VPS13B-204ENST00000441350 ERCC4Q92889 916 aaPredicted RBP23.53■■□□□ 1.36
VPS13B-204ENST00000441350 BHMT2Q9H2M3 363 aa23.53■■□□□ 1.36
VPS13B-204ENST00000441350 PTPN22Q9Y2R2 807 aa23.53■■□□□ 1.36
VPS13B-204ENST00000441350 A6NJR5 290 aa23.52■■□□□ 1.36
VPS13B-204ENST00000441350 CCND3P30281 292 aaPredicted RBP23.52■■□□□ 1.36
VPS13B-204ENST00000441350 YWHABP31946 246 aaKnown RBP23.52■■□□□ 1.36
VPS13B-204ENST00000441350 GRK4P32298 578 aa23.52■■□□□ 1.36
VPS13B-204ENST00000441350 DHX8Q14562 1220 aaKnown RBP23.52■■□□□ 1.36
VPS13B-204ENST00000441350 PLPPR4Q7Z2D5 763 aa23.52■■□□□ 1.36
VPS13B-204ENST00000441350 SPATA20Q8TB22 786 aa23.52■■□□□ 1.36
VPS13B-204ENST00000441350 C7orf25Q9BPX7 421 aa23.52■■□□□ 1.36
VPS13B-204ENST00000441350 ANKEF1Q9NU02 776 aa23.52■■□□□ 1.36
VPS13B-204ENST00000441350 SYCE3A1L190 88 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 MMP3P08254 477 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 CASP1P29466 404 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 PRKCEQ02156 737 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 CUL4BQ13620 913 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 CNNM4Q6P4Q7 775 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 ANO5Q75V66 913 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 ANP32EQ9BTT0 268 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 TRIM9Q9C026 710 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 LRRC27Q9C0I9 530 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 AZI2Q9H6S1 392 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 TUBE1Q9UJT0 475 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 PCDHA5Q9Y5H7 936 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 MYMKA6NI61 221 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 INHAP05111 366 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 SSBP05455 408 aaKnown RBP eCLIP23.51■■□□□ 1.35
VPS13B-204ENST00000441350 CNGA1P29973 690 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 SARSP49591 514 aaKnown RBP23.51■■□□□ 1.35
VPS13B-204ENST00000441350 UTP14CQ5TAP6 766 aaKnown RBP23.51■■□□□ 1.35
VPS13B-204ENST00000441350 NT5DC1Q5TFE4 455 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 AP5M1Q9H0R1 490 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 BLZF1Q9H2G9 400 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 SMARCAD1Q9H4L7 1026 aa23.51■■□□□ 1.35
VPS13B-204ENST00000441350 LGALS2P05162 132 aa23.5■■□□□ 1.35
VPS13B-204ENST00000441350 CYP11B2P19099 503 aa23.5■■□□□ 1.35
VPS13B-204ENST00000441350 RARRES1P49788 294 aa23.5■■□□□ 1.35
VPS13B-204ENST00000441350 ARSHQ5FYA8 562 aa23.5■■□□□ 1.35
VPS13B-204ENST00000441350 XKR3Q5GH77 459 aa23.5■■□□□ 1.35
VPS13B-204ENST00000441350 GPBP1Q86WP2 473 aa23.5■■□□□ 1.35
VPS13B-204ENST00000441350 TRIM50Q86XT4 487 aa23.5■■□□□ 1.35
VPS13B-204ENST00000441350 GLG1Q92896 1179 aa23.5■■□□□ 1.35
VPS13B-204ENST00000441350 TMEM150BA6NC51 233 aa23.49■■□□□ 1.35
VPS13B-204ENST00000441350 SLC26A2P50443 739 aa23.49■■□□□ 1.35
VPS13B-204ENST00000441350 NKX3-2P78367 333 aa23.49■■□□□ 1.35
VPS13B-204ENST00000441350 DGKDQ16760 1214 aa23.49■■□□□ 1.35
VPS13B-204ENST00000441350 OTUD6AQ7L8S5 288 aa23.49■■□□□ 1.35
VPS13B-204ENST00000441350 C16orf70Q9BSU1 422 aa23.49■■□□□ 1.35
VPS13B-204ENST00000441350 UPF3AQ9H1J1 476 aaKnown RBP23.49■■□□□ 1.35
VPS13B-204ENST00000441350 SMC2O95347 1197 aa23.48■■□□□ 1.35
VPS13B-204ENST00000441350 OATP04181 439 aa23.48■■□□□ 1.35
VPS13B-204ENST00000441350 GJA9P57773 515 aa23.48■■□□□ 1.35
VPS13B-204ENST00000441350 ZNF445P59923 1031 aa23.48■■□□□ 1.35
VPS13B-204ENST00000441350 RINT1Q6NUQ1 792 aa23.48■■□□□ 1.35
VPS13B-204ENST00000441350 DDX12PQ92771 950 aa23.48■■□□□ 1.35
VPS13B-204ENST00000441350 RUSC1Q9BVN2 902 aa23.48■■□□□ 1.35
VPS13B-204ENST00000441350 NIFKQ9BYG3 293 aaKnown RBP23.48■■□□□ 1.35
VPS13B-204ENST00000441350 ARHGEF35A5YM69 484 aa23.48■■□□□ 1.35
VPS13B-204ENST00000441350 RARBP10826 455 aa23.48■■□□□ 1.35
VPS13B-204ENST00000441350 CPT1AP50416 773 aa23.48■■□□□ 1.35
VPS13B-204ENST00000441350 IRX5P78411 483 aaPredicted RBP23.48■■□□□ 1.35
VPS13B-204ENST00000441350 PLA2G4FQ68DD2 849 aa23.48■■□□□ 1.35
VPS13B-204ENST00000441350 C1orf186Q6ZWK4 172 aa23.48■■□□□ 1.35
VPS13B-204ENST00000441350 SMARCE1Q969G3 411 aa23.48■■□□□ 1.35
VPS13B-204ENST00000441350 DNAJC19Q96DA6 116 aa23.48■■□□□ 1.35
VPS13B-204ENST00000441350 FAM167AQ96KS9 214 aa23.48■■□□□ 1.35
VPS13B-204ENST00000441350 GSDMAQ96QA5 445 aa23.48■■□□□ 1.35
VPS13B-204ENST00000441350 ERAP1Q9NZ08 941 aa23.48■■□□□ 1.35
VPS13B-204ENST00000441350 ARID2Q68CP9 1835 aa23.47■■□□□ 1.35
VPS13B-204ENST00000441350 KLRC4O43908 158 aa23.47■■□□□ 1.35
VPS13B-204ENST00000441350 HSPA1AP0DMV8 641 aaKnown RBP23.47■■□□□ 1.35
VPS13B-204ENST00000441350 HSPA1BP0DMV9 641 aaKnown RBP23.47■■□□□ 1.35
VPS13B-204ENST00000441350 CTCFP49711 727 aaPredicted RBP23.47■■□□□ 1.35
VPS13B-204ENST00000441350 NPEPPSP55786 919 aa23.47■■□□□ 1.35
VPS13B-204ENST00000441350 FSCN1Q16658 493 aaKnown RBP23.47■■□□□ 1.35
VPS13B-204ENST00000441350 XKR9Q5GH70 373 aa23.47■■□□□ 1.35
VPS13B-204ENST00000441350 PADI6Q6TGC4 694 aa23.47■■□□□ 1.35
VPS13B-204ENST00000441350 TRMT1LQ7Z2T5 733 aaKnown RBP23.47■■□□□ 1.35
VPS13B-204ENST00000441350 ATP8B4Q8TF62 1192 aa23.47■■□□□ 1.35
VPS13B-204ENST00000441350 FUCA2Q9BTY2 467 aa23.47■■□□□ 1.35
VPS13B-204ENST00000441350 NRBP2Q9NSY0 501 aa23.47■■□□□ 1.35
VPS13B-204ENST00000441350 BMP2KQ9NSY1 1161 aaPredicted RBP23.47■■□□□ 1.35
VPS13B-204ENST00000441350 KCND2Q9NZV8 630 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms