RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 HSD17B4P51659 736 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 MAP3K10Q02779 954 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 RASA3Q14644 834 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 MIER3Q7Z3K6 550 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 GPIHBP1Q8IV16 184 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 TRIM58Q8NG06 486 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 PIGOQ8TEQ8 1089 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 LPAR1Q92633 364 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 RPGRIP1Q96KN7 1286 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 AGBL1Q96MI9 1066 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 HSD17B14Q9BPX1 270 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 RHOXF2Q9BQY4 288 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 CRACR2AQ9BSW2 395 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 UNC45AQ9H3U1 944 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 OLFML3Q9NRN5 406 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 SEL1LQ9UBV2 794 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 PGAP2Q9UHJ9 254 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 FHOD1Q9Y613 1164 aa11.47□□□□□ -0.57
CPNE1-218ENST00000439806 PARP14Q460N5 1801 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 ASTN1O14525 1302 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 DDX39AO00148 427 aaKnown RBP11.46□□□□□ -0.57
CPNE1-218ENST00000439806 ZNF263O14978 683 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 PJA2O43164 708 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 PPP1R12BO60237 982 aaPredicted RBP11.46□□□□□ -0.57
CPNE1-218ENST00000439806 SLITRK3O94933 977 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 MOCS3O95396 460 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 XRCC5P13010 732 aaKnown RBP11.46□□□□□ -0.57
CPNE1-218ENST00000439806 ALAS1P13196 640 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 RPS12P25398 132 aaKnown RBP11.46□□□□□ -0.57
CPNE1-218ENST00000439806 POLD1P28340 1107 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 INPP5BP32019 993 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 DCAF17Q5H9S7 520 aaPredicted RBP11.46□□□□□ -0.57
CPNE1-218ENST00000439806 TCERG1LQ5VWI1 586 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 IQCEQ6IPM2 695 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 SLC30A10Q6XR72 485 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 C1orf186Q6ZWK4 172 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 NIPA1Q7RTP0 329 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 PRPF38AQ8NAV1 312 aaKnown RBP11.46□□□□□ -0.57
CPNE1-218ENST00000439806 ZFP91Q96JP5 570 aaPredicted RBP11.46□□□□□ -0.57
CPNE1-218ENST00000439806 CAPZA3Q96KX2 299 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 RIT2Q99578 217 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 DEFB129Q9H1M3 183 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 GANQ9H2C0 597 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 ANKZF1Q9H8Y5 726 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 MLXIPQ9HAP2 919 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 KCND2Q9NZV8 630 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 HDAC6Q9UBN7 1215 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 PNMA2Q9UL42 364 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 ODF2LQ9ULJ1 636 aa11.46□□□□□ -0.57
CPNE1-218ENST00000439806 RPTORQ8N122 1335 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 PHIPQ8WWQ0 1821 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 SHTN1A0MZ66 631 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 SFI1A8K8P3 1242 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 IPO5O00410 1097 aaKnown RBP11.45□□□□□ -0.58
CPNE1-218ENST00000439806 CLIC2O15247 247 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 ZBED4O75132 1171 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 NOL4O94818 638 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 MCM3P25205 808 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 NMT1P30419 496 aaKnown RBP11.45□□□□□ -0.58
CPNE1-218ENST00000439806 NAP1L1P55209 391 aaKnown RBP11.45□□□□□ -0.58
CPNE1-218ENST00000439806 ZNF280AP59817 542 aaPredicted RBP11.45□□□□□ -0.58
CPNE1-218ENST00000439806 GFPT1Q06210 699 aaPredicted RBP11.45□□□□□ -0.58
CPNE1-218ENST00000439806 KLHL30Q0D2K2 578 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 CCDC70Q6NSX1 233 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 GBP6Q6ZN66 633 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 FAM178BQ8IXR5 827 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 CPXCR1Q8N123 301 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 SAMD3Q8N6K7 520 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 SPAG5Q96R06 1193 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.45□□□□□ -0.58
CPNE1-218ENST00000439806 KIAA1683Q9H0B3 1180 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 PARVGQ9HBI0 331 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 RAVER2Q9HCJ3 691 aaKnown RBP11.45□□□□□ -0.58
CPNE1-218ENST00000439806 PLCB1Q9NQ66 1216 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 JADE2Q9NQC1 790 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 PKD2L1Q9P0L9 805 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 RAB21Q9UL25 225 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 HYOU1Q9Y4L1 999 aa11.45□□□□□ -0.58
CPNE1-218ENST00000439806 COL11A1P12107 1806 aaPredicted RBP11.44□□□□□ -0.58
CPNE1-218ENST00000439806 ZNF536O15090 1300 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 PHF20L1A8MW92 1017 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 RBAK-RBAKDNI3L0D1 243 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 NFIBO00712 420 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 CTNND1O60716 968 aaKnown RBP11.44□□□□□ -0.58
CPNE1-218ENST00000439806 SRGAP2O75044 1071 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 TBC1D8O95759 1140 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 TFRCP02786 760 aaKnown RBP11.44□□□□□ -0.58
CPNE1-218ENST00000439806 BCRP11274 1271 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 HOXD13P35453 343 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 PLA2G4AP47712 749 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 ENOX2Q16206 610 aaKnown RBP11.44□□□□□ -0.58
CPNE1-218ENST00000439806 NFIL3Q16649 462 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 EXOC3L4Q17RC7 722 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 LONRF2Q1L5Z9 754 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 ASTE1Q2TB18 679 aaPredicted RBP11.44□□□□□ -0.58
CPNE1-218ENST00000439806 DCAF15Q66K64 600 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 HGSNATQ68CP4 663 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 HS2ST1Q7LGA3 356 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 FAM186BQ8IYM0 893 aa11.44□□□□□ -0.58
CPNE1-218ENST00000439806 FAM133AQ8N9E0 248 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms