RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 LRIG3Q6UXM1 1119 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 ARMC9Q7Z3E5 817 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 UCMAQ8WVF2 138 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 SEMA4AQ9H3S1 761 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 DLGAP2Q9P1A6 1054 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 PIGWQ7Z7B1 504 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 GJA10Q969M2 543 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 LSM14BQ9BX40 385 aaKnown RBP12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 ETNK1Q9HBU6 452 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 LRP2BPQ9P2M1 347 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 BIN2Q9UBW5 565 aaPredicted RBP12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 RGS16O15492 202 aaPredicted RBP12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 BCAMP50895 628 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 SCNN1BP51168 640 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 RAD23BP54727 409 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 KLHL30Q0D2K2 578 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 SFMBT2Q5VUG0 894 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 TMEM154Q6P9G4 183 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 NELFCDQ8IXH7 590 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 C4orf32Q8N8J7 132 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 SPATA5Q8NB90 893 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 CNKSR1Q969H4 720 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 RNF25Q96BH1 459 aaPredicted RBP12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 ZSCAN10Q96SZ4 725 aaPredicted RBP12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 TMOD3Q9NYL9 352 aa12.28□□□□□ -0.44
SEC61A1-202ENST00000424880 PRPF3O43395 683 aaKnown RBP12.27□□□□□ -0.44
SEC61A1-202ENST00000424880 ADAMTS2O95450 1211 aa12.27□□□□□ -0.44
SEC61A1-202ENST00000424880 FGGP02679 453 aa12.27□□□□□ -0.44
SEC61A1-202ENST00000424880 KIF5BP33176 963 aa12.27□□□□□ -0.44
SEC61A1-202ENST00000424880 CDK17Q00537 523 aa12.27□□□□□ -0.44
SEC61A1-202ENST00000424880 SEC23AQ15436 765 aa12.27□□□□□ -0.44
SEC61A1-202ENST00000424880 LETM2Q2VYF4 491 aa12.27□□□□□ -0.44
SEC61A1-202ENST00000424880 ZSCAN29Q8IWY8 852 aaPredicted RBP12.27□□□□□ -0.44
SEC61A1-202ENST00000424880 DHTKD1Q96HY7 919 aaPredicted RBP12.27□□□□□ -0.44
SEC61A1-202ENST00000424880 FMO2Q99518 471 aa12.27□□□□□ -0.44
SEC61A1-202ENST00000424880 OCEL1Q9H607 264 aa12.27□□□□□ -0.44
SEC61A1-202ENST00000424880 KCNK9Q9NPC2 374 aa12.27□□□□□ -0.44
SEC61A1-202ENST00000424880 METTL5Q9NRN9 209 aaKnown RBP12.27□□□□□ -0.44
SEC61A1-202ENST00000424880 DISP2A7MBM2 1401 aa12.27□□□□□ -0.45
SEC61A1-202ENST00000424880 PAPPAQ13219 1627 aa12.27□□□□□ -0.45
SEC61A1-202ENST00000424880 ALADP13716 330 aa12.27□□□□□ -0.45
SEC61A1-202ENST00000424880 CCND1P24385 295 aa12.27□□□□□ -0.45
SEC61A1-202ENST00000424880 TROAPQ12815 778 aa12.27□□□□□ -0.45
SEC61A1-202ENST00000424880 B4GALNT2Q8NHY0 566 aa12.27□□□□□ -0.45
SEC61A1-202ENST00000424880 FBXO25Q8TCJ0 367 aa12.27□□□□□ -0.45
SEC61A1-202ENST00000424880 EZH1Q92800 747 aaPredicted RBP12.27□□□□□ -0.45
SEC61A1-202ENST00000424880 SLC4A9Q96Q91 983 aa12.27□□□□□ -0.45
SEC61A1-202ENST00000424880 NACAP1Q9BZK3 213 aa12.27□□□□□ -0.45
SEC61A1-202ENST00000424880 KBTBD4Q9NVX7 518 aa12.27□□□□□ -0.45
SEC61A1-202ENST00000424880 CHORDC1Q9UHD1 332 aaPredicted RBP12.27□□□□□ -0.45
SEC61A1-202ENST00000424880 COL14A1Q05707 1796 aaKnown RBP12.27□□□□□ -0.45
SEC61A1-202ENST00000424880 AFF2P51816 1311 aa12.27□□□□□ -0.45
SEC61A1-202ENST00000424880 A0A1W2PQJ5 194 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 PJA2O43164 708 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 PAEPP09466 180 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 COPS2P61201 443 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 DYNLL1P63167 89 aaKnown RBP12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 ATP11AP98196 1134 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 ROR2Q01974 943 aaKnown RBP12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 ZNF772Q68DY9 489 aaPredicted RBP12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 SUPT20HQ8NEM7 779 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 ADAM33Q9BZ11 813 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 LMCD1Q9NZU5 365 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 CTNNAL1Q9UBT7 734 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 ARFGEF2Q9Y6D5 1785 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 BICDL2A1A5D9 508 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 NOL4O94818 638 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 LCA5LO95447 670 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 SCG2P13521 617 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 FERP16591 822 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 GM2AP17900 193 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 HNRNPH3P31942 346 aaKnown RBP12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 GCLCP48506 637 aaPredicted RBP12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 PTK2Q05397 1052 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 CUL1Q13616 776 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 LONRF1Q17RB8 773 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 CABP7Q86V35 215 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 RPUSD2Q8IZ73 545 aaKnown RBP12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 ZFAND2BQ8WV99 257 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 DDX50Q9BQ39 737 aaKnown RBP12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 TBK1Q9UHD2 729 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 LAMB4A4D0S4 1761 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 CCDC194A0A1B0GVG4 234 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 STXBP3O00186 592 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 SNX3O60493 162 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 ENTPD5O75356 428 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 BMP15O95972 392 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 GSTA1P08263 222 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 MYBP10242 640 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 LONP1P36776 959 aaKnown RBP12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 ADAM9Q13443 819 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 MEX3CQ5U5Q3 659 aaKnown RBP12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 AGBL2Q5U5Z8 902 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 ZNF449Q6P9G9 518 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 FAM114A1Q8IWE2 563 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 DNAJC10Q8IXB1 793 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 RNF10Q8N5U6 811 aaKnown RBP12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 TTC8Q8TAM2 541 aa12.26□□□□□ -0.45
SEC61A1-202ENST00000424880 ESR2Q92731 530 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms