RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 ZSCAN32Q9NX65 697 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 FBXO4Q9UKT5 387 aa7.4□□□□□ -1.22
SDCBP-203ENST00000424270 SUPT16HQ9Y5B9 1047 aaKnown RBP7.4□□□□□ -1.22
SDCBP-203ENST00000424270 SETXQ7Z333 2677 aaKnown RBP7.39□□□□□ -1.23
SDCBP-203ENST00000424270 ZBED9Q6R2W3 1325 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.39□□□□□ -1.23
SDCBP-203ENST00000424270 DENND3A2RUS2 1198 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 LGALS2P05162 132 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 SHC2P98077 582 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 SP4Q02446 784 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 UBXN2BQ14CS0 331 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 PTPN14Q15678 1187 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 AASDHQ4L235 1098 aaPredicted RBP7.39□□□□□ -1.23
SDCBP-203ENST00000424270 SBK1Q52WX2 424 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 FAM26DQ5JW98 314 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 CELF3Q5SZQ8 465 aaKnown RBP7.39□□□□□ -1.23
SDCBP-203ENST00000424270 MYSM1Q5VVJ2 828 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 TAF2Q6P1X5 1199 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 KCNV1Q6PIU1 500 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 FAM9BQ8IZU0 186 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 PJA1Q8NG27 643 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 GPR152Q8TDT2 470 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 RSAD2Q8WXG1 361 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 FRAT1Q92837 279 aaPredicted RBP7.39□□□□□ -1.23
SDCBP-203ENST00000424270 TAAR1Q96RJ0 339 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 IWS1Q96ST2 819 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 C16orf70Q9BSU1 422 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 FAM49AQ9H0Q0 323 aaPredicted RBP7.39□□□□□ -1.23
SDCBP-203ENST00000424270 EPC1Q9H2F5 836 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 BOLA2Q9H3K6 86 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 C1orf115Q9H7X2 142 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 TYW1Q9NV66 732 aaKnown RBP7.39□□□□□ -1.23
SDCBP-203ENST00000424270 LZTS1Q9Y250 596 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 CDY2AQ9Y6F7 541 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 LCTP09848 1927 aa7.39□□□□□ -1.23
SDCBP-203ENST00000424270 FASNP49327 2511 aaKnown RBP7.38□□□□□ -1.23
SDCBP-203ENST00000424270 TTLL13PA6NNM8 815 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 DHX16O60231 1041 aaKnown RBP7.38□□□□□ -1.23
SDCBP-203ENST00000424270 CLASP2O75122 1294 aaKnown RBP7.38□□□□□ -1.23
SDCBP-203ENST00000424270 LRRN2O75325 713 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 CXCL14O95715 111 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 SRFP11831 508 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 PPM1AP35813 382 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 ATP8B2P98198 1209 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 FOXC1Q12948 553 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 NFX1Q12986 1120 aaKnown RBP7.38□□□□□ -1.23
SDCBP-203ENST00000424270 KCNC3Q14003 757 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 UBE3CQ15386 1083 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 FBXO47Q5MNV8 452 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 IER5Q5VY09 327 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 LAIR1Q6GTX8 287 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 PHLDB3Q6NSJ2 640 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 TSSK4Q6SA08 328 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 MAMSTRQ6ZN01 415 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 PRR23CQ6ZRP0 262 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.38□□□□□ -1.23
SDCBP-203ENST00000424270 MCF2L2Q86YR7 1114 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 ABI1Q8IZP0 508 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 CLASRPQ8N2M8 674 aaKnown RBP7.38□□□□□ -1.23
SDCBP-203ENST00000424270 C12orf50Q8NA57 414 aaPredicted RBP7.38□□□□□ -1.23
SDCBP-203ENST00000424270 SSH3Q8TE77 659 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 LMBR1Q8WVP7 490 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 DNAJB3Q8WWF6 145 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 ZCCHC14Q8WYQ9 949 aaKnown RBP7.38□□□□□ -1.23
SDCBP-203ENST00000424270 SPOCK2Q92563 424 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 STAMQ92783 540 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 CLUAP1Q96AJ1 413 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 ZNF558Q96NG5 402 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 USP26Q9BXU7 913 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 NACAP1Q9BZK3 213 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 PUS7LQ9H0K6 701 aaKnown RBP7.38□□□□□ -1.23
SDCBP-203ENST00000424270 EHMT1Q9H9B1 1298 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 TOMM22Q9NS69 142 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 SEMA4GQ9NTN9 838 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 ANKFY1Q9P2R3 1169 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 HCSTQ9UBK5 93 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 EXOC6BQ9Y2D4 811 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 PLXNA4Q9HCM2 1894 aa7.38□□□□□ -1.23
SDCBP-203ENST00000424270 FRYLO94915 3013 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 GPR179Q6PRD1 2367 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 TMEM8BA6NDV4 472 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 SRRM3A6NNA2 597 aaPredicted RBP7.37□□□□□ -1.23
SDCBP-203ENST00000424270 IPO8O15397 1037 aaKnown RBP7.37□□□□□ -1.23
SDCBP-203ENST00000424270 GDF9O60383 454 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 RANBP6O60518 1105 aaKnown RBP7.37□□□□□ -1.23
SDCBP-203ENST00000424270 NMT2O60551 498 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 CHGBP05060 677 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 NR3C2P08235 984 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 PYGBP11216 843 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 EPCAMP16422 314 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 NCLP19338 710 aaKnown RBP7.37□□□□□ -1.23
SDCBP-203ENST00000424270 PBX3P40426 434 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 SARSP49591 514 aaKnown RBP7.37□□□□□ -1.23
SDCBP-203ENST00000424270 IGBP1P78318 339 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 MRPS6P82932 125 aaKnown RBP7.37□□□□□ -1.23
SDCBP-203ENST00000424270 TMEM62Q0P6H9 643 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 PPFIA1Q13136 1202 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 PPP2R5DQ14738 602 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 LETM2Q2VYF4 491 aa7.37□□□□□ -1.23
SDCBP-203ENST00000424270 FAM102BQ5T8I3 360 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms