RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 DBR1Q9UK59 544 aaKnown RBP18.12■□□□□ 0.49
PKP4-204ENST00000421462 THRAP3Q9Y2W1 955 aaKnown RBP18.12■□□□□ 0.49
PKP4-204ENST00000421462 COL1A1P02452 1464 aaPredicted RBP18.11■□□□□ 0.49
PKP4-204ENST00000421462 FOXO6A8MYZ6 492 aa18.11■□□□□ 0.49
PKP4-204ENST00000421462 E9PMD0 336 aa18.11■□□□□ 0.49
PKP4-204ENST00000421462 UBOX5O94941 541 aa18.11■□□□□ 0.49
PKP4-204ENST00000421462 GRM4Q14833 912 aa18.11■□□□□ 0.49
PKP4-204ENST00000421462 ZKSCAN8Q15776 578 aaPredicted RBP18.11■□□□□ 0.49
PKP4-204ENST00000421462 LACTB2Q53H82 288 aaPredicted RBP18.11■□□□□ 0.49
PKP4-204ENST00000421462 DZIP1Q86YF9 867 aaKnown RBP18.11■□□□□ 0.49
PKP4-204ENST00000421462 RAD54LQ92698 747 aa18.11■□□□□ 0.49
PKP4-204ENST00000421462 NAGPAQ9UK23 515 aa18.11■□□□□ 0.49
PKP4-204ENST00000421462 FRMPD2Q68DX3 1309 aaPredicted RBP18.11■□□□□ 0.49
PKP4-204ENST00000421462 C5orf60A6NFR6 353 aa18.11■□□□□ 0.49
PKP4-204ENST00000421462 DNAJC8O75937 253 aaPredicted RBP18.11■□□□□ 0.49
PKP4-204ENST00000421462 FGRP09769 529 aa18.11■□□□□ 0.49
PKP4-204ENST00000421462 AADACL2Q6P093 401 aa18.11■□□□□ 0.49
PKP4-204ENST00000421462 TPCN2Q8NHX9 752 aa18.11■□□□□ 0.49
PKP4-204ENST00000421462 NUCKS1Q9H1E3 243 aaKnown RBP18.11■□□□□ 0.49
PKP4-204ENST00000421462 TRPM3Q9HCF6 1732 aaPredicted RBP18.1■□□□□ 0.49
PKP4-204ENST00000421462 PVALEFA0A1B0GWK0 134 aa18.1■□□□□ 0.49
PKP4-204ENST00000421462 GNAQP50148 359 aa18.1■□□□□ 0.49
PKP4-204ENST00000421462 SLC29A2Q14542 456 aa18.1■□□□□ 0.49
PKP4-204ENST00000421462 DENND2CQ68D51 928 aa18.1■□□□□ 0.49
PKP4-204ENST00000421462 C3orf67Q6ZVT6 689 aa18.1■□□□□ 0.49
PKP4-204ENST00000421462 TRPM8Q7Z2W7 1104 aa18.1■□□□□ 0.49
PKP4-204ENST00000421462 C1orf131Q8NDD1 294 aaKnown RBP18.1■□□□□ 0.49
PKP4-204ENST00000421462 EPS8L3Q8TE67 593 aaKnown RBP18.1■□□□□ 0.49
PKP4-204ENST00000421462 TRIM33Q9UPN9 1127 aa18.1■□□□□ 0.49
PKP4-204ENST00000421462 BCORQ6W2J9 1755 aa18.1■□□□□ 0.49
PKP4-204ENST00000421462 PPP1R12AO14974 1030 aaPredicted RBP18.1■□□□□ 0.49
PKP4-204ENST00000421462 FGFR4P22455 802 aa18.1■□□□□ 0.49
PKP4-204ENST00000421462 BIRC2Q13490 618 aa18.1■□□□□ 0.49
PKP4-204ENST00000421462 ZMYND12Q9H0C1 365 aa18.1■□□□□ 0.49
PKP4-204ENST00000421462 ADAMTS2O95450 1211 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 GNA11P29992 359 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 EIF6P56537 245 aaKnown RBP18.09■□□□□ 0.49
PKP4-204ENST00000421462 TRIM68Q6AZZ1 485 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 ACTRT1Q8TDG2 376 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 YIPF3Q9GZM5 350 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 ARPP21Q9UBL0 812 aaPredicted RBP18.09■□□□□ 0.49
PKP4-204ENST00000421462 EME2A4GXA9 379 aaPredicted RBP18.09■□□□□ 0.49
PKP4-204ENST00000421462 TMEM110-MUSTN1A8MSY1 372 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 NR2F2P24468 414 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 MAP2K1Q02750 393 aaPredicted RBP18.09■□□□□ 0.49
PKP4-204ENST00000421462 ARMC9Q7Z3E5 817 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 MAPKAPK5Q8IW41 473 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 ANKRD42Q8N9B4 389 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 FBXO25Q8TCJ0 367 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 TGFBRAP1Q8WUH2 860 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 LMBR1Q8WVP7 490 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 RIC8AQ9NPQ8 531 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 TMOD4Q9NZQ9 345 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 CICQ96RK0 1608 aaPredicted RBP18.09■□□□□ 0.49
PKP4-204ENST00000421462 IGF2BP3O00425 579 aaKnown RBP eCLIP18.09■□□□□ 0.49
PKP4-204ENST00000421462 GFPT2O94808 682 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 H2AFZP0C0S5 128 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 PCP11498 1178 aaKnown RBP18.09■□□□□ 0.49
PKP4-204ENST00000421462 DIXDC1Q155Q3 683 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 UBE2SQ16763 222 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 H2AFVQ71UI9 128 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 HOOK3Q86VS8 718 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 BMP2KQ9NSY1 1161 aaPredicted RBP18.09■□□□□ 0.49
PKP4-204ENST00000421462 CHORDC1Q9UHD1 332 aaPredicted RBP18.09■□□□□ 0.49
PKP4-204ENST00000421462 C15orf41Q9Y2V0 281 aa18.09■□□□□ 0.49
PKP4-204ENST00000421462 ALDH5A1P51649 535 aaPredicted RBP18.08■□□□□ 0.49
PKP4-204ENST00000421462 IFI16Q16666 785 aaKnown RBP18.08■□□□□ 0.49
PKP4-204ENST00000421462 SMIM5Q71RC9 77 aa18.08■□□□□ 0.49
PKP4-204ENST00000421462 PLCD4Q9BRC7 762 aa18.08■□□□□ 0.49
PKP4-204ENST00000421462 EDEM3Q9BZQ6 932 aa18.08■□□□□ 0.49
PKP4-204ENST00000421462 SEMA4AQ9H3S1 761 aa18.08■□□□□ 0.49
PKP4-204ENST00000421462 ECT2Q9H8V3 914 aa18.08■□□□□ 0.49
PKP4-204ENST00000421462 ERVK-5Q9HDB9 667 aa18.08■□□□□ 0.49
PKP4-204ENST00000421462 ATP8A2Q9NTI2 1148 aa18.08■□□□□ 0.49
PKP4-204ENST00000421462 HDAC9Q9UKV0 1011 aa18.08■□□□□ 0.49
PKP4-204ENST00000421462 KIAA1024Q9UPX6 916 aa18.08■□□□□ 0.49
PKP4-204ENST00000421462 RTCBQ9Y3I0 505 aaKnown RBP18.08■□□□□ 0.49
PKP4-204ENST00000421462 SRRM3A6NNA2 597 aaPredicted RBP18.08■□□□□ 0.48
PKP4-204ENST00000421462 RAD21O60216 631 aa18.08■□□□□ 0.48
PKP4-204ENST00000421462 RTN2O75298 545 aa18.08■□□□□ 0.48
PKP4-204ENST00000421462 UCHL3P15374 230 aa18.08■□□□□ 0.48
PKP4-204ENST00000421462 PMS2P54278 862 aa18.08■□□□□ 0.48
PKP4-204ENST00000421462 DR1Q01658 176 aa18.08■□□□□ 0.48
PKP4-204ENST00000421462 DGKHQ86XP1 1220 aa18.08■□□□□ 0.48
PKP4-204ENST00000421462 LRRC57Q8N9N7 239 aa18.08■□□□□ 0.48
PKP4-204ENST00000421462 C3orf20Q8ND61 904 aa18.08■□□□□ 0.48
PKP4-204ENST00000421462 KLHL29Q96CT2 875 aa18.08■□□□□ 0.48
PKP4-204ENST00000421462 ZNF317Q96PQ6 595 aaPredicted RBP18.08■□□□□ 0.48
PKP4-204ENST00000421462 CARD10Q9BWT7 1032 aa18.08■□□□□ 0.48
PKP4-204ENST00000421462 CNOT10Q9H9A5 744 aaKnown RBP18.08■□□□□ 0.48
PKP4-204ENST00000421462 DOCK2Q92608 1830 aa18.08■□□□□ 0.48
PKP4-204ENST00000421462 BZW1Q7L1Q6 419 aaKnown RBP18.07■□□□□ 0.48
PKP4-204ENST00000421462 IRF2BP2Q7Z5L9 587 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 GDAP1Q8TB36 358 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 NEK9Q8TD19 979 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 FAM114A2Q9NRY5 505 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 FGFR1OP2Q9NVK5 253 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 STK17AQ9UEE5 414 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 PTPN22Q9Y2R2 807 aa18.07■□□□□ 0.48
PKP4-204ENST00000421462 DAAM1Q9Y4D1 1078 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms