RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 CYP3A7-CYP3A51PA0A087WV96 503 aa17.32■□□□□ 0.36
NUP50-204ENST00000417702 GJB5O95377 273 aa17.32■□□□□ 0.36
NUP50-204ENST00000417702 LARGE1O95461 756 aa17.32■□□□□ 0.36
NUP50-204ENST00000417702 CYP3A7P24462 503 aa17.32■□□□□ 0.36
NUP50-204ENST00000417702 MRPS6P82932 125 aaKnown RBP17.32■□□□□ 0.36
NUP50-204ENST00000417702 INF2Q27J81 1249 aa17.32■□□□□ 0.36
NUP50-204ENST00000417702 ZNF484Q5JVG2 852 aa17.32■□□□□ 0.36
NUP50-204ENST00000417702 LRCH2Q5VUJ6 765 aa17.32■□□□□ 0.36
NUP50-204ENST00000417702 MTHFD1LQ6UB35 978 aa17.32■□□□□ 0.36
NUP50-204ENST00000417702 MYOCDQ8IZQ8 938 aa17.32■□□□□ 0.36
NUP50-204ENST00000417702 SLC5A5Q92911 643 aa17.32■□□□□ 0.36
NUP50-204ENST00000417702 ZBTB10Q96DT7 871 aa17.32■□□□□ 0.36
NUP50-204ENST00000417702 IFIH1Q9BYX4 1025 aaKnown RBP17.32■□□□□ 0.36
NUP50-204ENST00000417702 BRMS1Q9HCU9 246 aa17.32■□□□□ 0.36
NUP50-204ENST00000417702 DISC1Q9NRI5 854 aa17.32■□□□□ 0.36
NUP50-204ENST00000417702 GABBR1Q9UBS5 961 aa17.32■□□□□ 0.36
NUP50-204ENST00000417702 MAFBQ9Y5Q3 323 aaPredicted RBP17.32■□□□□ 0.36
NUP50-204ENST00000417702 CDY2AQ9Y6F7 541 aa17.32■□□□□ 0.36
NUP50-204ENST00000417702 GBF1Q92538 1859 aa17.32■□□□□ 0.36
NUP50-204ENST00000417702 COL1A2P08123 1366 aa17.31■□□□□ 0.36
NUP50-204ENST00000417702 DTNBO60941 627 aa17.31■□□□□ 0.36
NUP50-204ENST00000417702 TDP2O95551 362 aa17.31■□□□□ 0.36
NUP50-204ENST00000417702 GHRP10912 638 aa17.31■□□□□ 0.36
NUP50-204ENST00000417702 IGFBP4P22692 258 aa17.31■□□□□ 0.36
NUP50-204ENST00000417702 KLRC1P26715 233 aa17.31■□□□□ 0.36
NUP50-204ENST00000417702 SFNP31947 248 aa17.31■□□□□ 0.36
NUP50-204ENST00000417702 JAK3P52333 1124 aa17.31■□□□□ 0.36
NUP50-204ENST00000417702 MGAT3Q09327 533 aa17.31■□□□□ 0.36
NUP50-204ENST00000417702 C8orf34Q49A92 452 aa17.31■□□□□ 0.36
NUP50-204ENST00000417702 FAM117BQ6P1L5 589 aa17.31■□□□□ 0.36
NUP50-204ENST00000417702 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.31■□□□□ 0.36
NUP50-204ENST00000417702 TMCO2Q7Z6W1 182 aaPredicted RBP17.31■□□□□ 0.36
NUP50-204ENST00000417702 NME8Q8N427 588 aa17.31■□□□□ 0.36
NUP50-204ENST00000417702 BBXQ8WY36 941 aaPredicted RBP17.31■□□□□ 0.36
NUP50-204ENST00000417702 FAM167AQ96KS9 214 aa17.31■□□□□ 0.36
NUP50-204ENST00000417702 RAD9AQ99638 391 aa17.31■□□□□ 0.36
NUP50-204ENST00000417702 DDX25Q9UHL0 483 aaKnown RBP17.31■□□□□ 0.36
NUP50-204ENST00000417702 SMIM35A0A1B0GVV1 85 aa17.3■□□□□ 0.36
NUP50-204ENST00000417702 CHMP2AO43633 222 aa17.3■□□□□ 0.36
NUP50-204ENST00000417702 TAP1Q03518 808 aa17.3■□□□□ 0.36
NUP50-204ENST00000417702 LETM2Q2VYF4 491 aa17.3■□□□□ 0.36
NUP50-204ENST00000417702 TRMT1LQ7Z2T5 733 aaKnown RBP17.3■□□□□ 0.36
NUP50-204ENST00000417702 NEK8Q86SG6 692 aa17.3■□□□□ 0.36
NUP50-204ENST00000417702 NSUN7Q8NE18 718 aaKnown RBP17.3■□□□□ 0.36
NUP50-204ENST00000417702 NAP1L4Q99733 375 aaKnown RBP17.3■□□□□ 0.36
NUP50-204ENST00000417702 OSBPL7Q9BZF2 842 aa17.3■□□□□ 0.36
NUP50-204ENST00000417702 GJB4Q9NTQ9 266 aa17.3■□□□□ 0.36
NUP50-204ENST00000417702 CEP131Q9UPN4 1083 aa17.3■□□□□ 0.36
NUP50-204ENST00000417702 LIMCH1Q9UPQ0 1083 aa17.3■□□□□ 0.36
NUP50-204ENST00000417702 TRPV2Q9Y5S1 764 aa17.3■□□□□ 0.36
NUP50-204ENST00000417702 COL6A3P12111 3177 aa17.3■□□□□ 0.36
NUP50-204ENST00000417702 FDPSP14324 419 aaKnown RBP17.29■□□□□ 0.36
NUP50-204ENST00000417702 GCFC2P16383 781 aaKnown RBP17.29■□□□□ 0.36
NUP50-204ENST00000417702 ATP4AP20648 1035 aa17.29■□□□□ 0.36
NUP50-204ENST00000417702 KRT2P35908 639 aa17.29■□□□□ 0.36
NUP50-204ENST00000417702 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
NUP50-204ENST00000417702 TRIM29Q14134 588 aa17.29■□□□□ 0.36
NUP50-204ENST00000417702 LPIN1Q14693 890 aa17.29■□□□□ 0.36
NUP50-204ENST00000417702 FBXO47Q5MNV8 452 aa17.29■□□□□ 0.36
NUP50-204ENST00000417702 TSHZ1Q6ZSZ6 1077 aa17.29■□□□□ 0.36
NUP50-204ENST00000417702 PIK3AP1Q6ZUJ8 805 aa17.29■□□□□ 0.36
NUP50-204ENST00000417702 USP38Q8NB14 1042 aa17.29■□□□□ 0.36
NUP50-204ENST00000417702 RDM1Q8NG50 284 aa17.29■□□□□ 0.36
NUP50-204ENST00000417702 MBOAT7Q96N66 472 aa17.29■□□□□ 0.36
NUP50-204ENST00000417702 UNC45AQ9H3U1 944 aa17.29■□□□□ 0.36
NUP50-204ENST00000417702 CERS4Q9HA82 394 aa17.29■□□□□ 0.36
NUP50-204ENST00000417702 NRBP2Q9NSY0 501 aa17.29■□□□□ 0.36
NUP50-204ENST00000417702 INSL6Q9Y581 213 aa17.29■□□□□ 0.36
NUP50-204ENST00000417702 MYH9P35579 1960 aaKnown RBP17.29■□□□□ 0.36
NUP50-204ENST00000417702 IGSF9BQ9UPX0 1349 aa17.28■□□□□ 0.36
NUP50-204ENST00000417702 RBAK-RBAKDNI3L0D1 243 aa17.28■□□□□ 0.36
NUP50-204ENST00000417702 PSMD10O75832 226 aa17.28■□□□□ 0.36
NUP50-204ENST00000417702 TMEM62Q0P6H9 643 aa17.28■□□□□ 0.36
NUP50-204ENST00000417702 ADGRE1Q14246 886 aa17.28■□□□□ 0.36
NUP50-204ENST00000417702 MIER3Q7Z3K6 550 aa17.28■□□□□ 0.36
NUP50-204ENST00000417702 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.28■□□□□ 0.36
NUP50-204ENST00000417702 OXER1Q8TDS5 423 aa17.28■□□□□ 0.36
NUP50-204ENST00000417702 ARNTL2Q8WYA1 636 aa17.28■□□□□ 0.36
NUP50-204ENST00000417702 GJA10Q969M2 543 aa17.28■□□□□ 0.36
NUP50-204ENST00000417702 CELF4Q9BZC1 486 aaKnown RBP17.28■□□□□ 0.36
NUP50-204ENST00000417702 SQORQ9Y6N5 450 aa17.28■□□□□ 0.36
NUP50-204ENST00000417702 MICAL3Q7RTP6 2002 aa17.28■□□□□ 0.36
NUP50-204ENST00000417702 LCHNA4D1U4 455 aa17.27■□□□□ 0.36
NUP50-204ENST00000417702 MAGEB2O15479 319 aa17.27■□□□□ 0.36
NUP50-204ENST00000417702 MARCH6O60337 910 aa17.27■□□□□ 0.36
NUP50-204ENST00000417702 JAK2O60674 1132 aa17.27■□□□□ 0.36
NUP50-204ENST00000417702 ARHGEF15O94989 841 aa17.27■□□□□ 0.36
NUP50-204ENST00000417702 OATP04181 439 aa17.27■□□□□ 0.36
NUP50-204ENST00000417702 PPP4R3AQ6IN85 833 aa17.27■□□□□ 0.36
NUP50-204ENST00000417702 METTL13Q8N6R0 699 aa17.27■□□□□ 0.36
NUP50-204ENST00000417702 ETNPPLQ8TBG4 499 aa17.27■□□□□ 0.36
NUP50-204ENST00000417702 TOP1MTQ969P6 601 aa17.27■□□□□ 0.36
NUP50-204ENST00000417702 FAM20AQ96MK3 541 aa17.27■□□□□ 0.36
NUP50-204ENST00000417702 YME1L1Q96TA2 773 aa17.27■□□□□ 0.36
NUP50-204ENST00000417702 KDM3AQ9Y4C1 1321 aa17.26■□□□□ 0.35
NUP50-204ENST00000417702 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.26■□□□□ 0.35
NUP50-204ENST00000417702 ZBTB42B2RXF5 422 aa17.26■□□□□ 0.35
NUP50-204ENST00000417702 GTPBP6O43824 516 aaPredicted RBP17.26■□□□□ 0.35
NUP50-204ENST00000417702 SLC37A4O43826 429 aa17.26■□□□□ 0.35
NUP50-204ENST00000417702 CCNT1O60563 726 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms